RNA–Protein interactions for RNA: ENST00000507689.1

COL1A1-211, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-211ENST00000507689 SAMD3Q8N6K7 520 aa18.11■□□□□ 0.49
COL1A1-211ENST00000507689 PCSK9Q8NBP7 692 aaKnown RBP18.11■□□□□ 0.49
COL1A1-211ENST00000507689 NSUN6Q8TEA1 469 aaKnown RBP18.11■□□□□ 0.49
COL1A1-211ENST00000507689 FGD4Q96M96 766 aa18.11■□□□□ 0.49
COL1A1-211ENST00000507689 JAKMIP1Q96N16 626 aaKnown RBP18.11■□□□□ 0.49
COL1A1-211ENST00000507689 PIGSQ96S52 555 aa18.11■□□□□ 0.49
COL1A1-211ENST00000507689 RIOX1Q9H6W3 641 aa18.11■□□□□ 0.49
COL1A1-211ENST00000507689 MAP3K20Q9NYL2 800 aaKnown RBP18.11■□□□□ 0.49
COL1A1-211ENST00000507689 COL6A1P12109 1028 aa18.1■□□□□ 0.49
COL1A1-211ENST00000507689 HSPA4P34932 840 aa18.1■□□□□ 0.49
COL1A1-211ENST00000507689 MNX1P50219 401 aaPredicted RBP18.1■□□□□ 0.49
COL1A1-211ENST00000507689 ATN1P54259 1190 aaPredicted RBP18.1■□□□□ 0.49
COL1A1-211ENST00000507689 ARHGEF16Q5VV41 709 aa18.1■□□□□ 0.49
COL1A1-211ENST00000507689 MICU3Q86XE3 530 aa18.1■□□□□ 0.49
COL1A1-211ENST00000507689 PIBF1Q8WXW3 757 aa18.1■□□□□ 0.49
COL1A1-211ENST00000507689 CUL5Q93034 780 aa18.1■□□□□ 0.49
COL1A1-211ENST00000507689 VTI1AQ96AJ9 217 aa18.1■□□□□ 0.49
COL1A1-211ENST00000507689 TSEN34Q9BSV6 310 aaKnown RBP18.1■□□□□ 0.49
COL1A1-211ENST00000507689 SPZ1Q9BXG8 430 aa18.1■□□□□ 0.49
COL1A1-211ENST00000507689 RBM28Q9NW13 759 aaKnown RBP18.1■□□□□ 0.49
COL1A1-211ENST00000507689 SYNRGQ9UMZ2 1314 aa18.09■□□□□ 0.49
COL1A1-211ENST00000507689 ZBTB43O43298 467 aa18.09■□□□□ 0.49
COL1A1-211ENST00000507689 ADCYAP1R1P41586 468 aa18.09■□□□□ 0.49
COL1A1-211ENST00000507689 BRDTQ58F21 947 aaPredicted RBP18.09■□□□□ 0.49
COL1A1-211ENST00000507689 GNASQ5JWF2 1037 aa18.09■□□□□ 0.49
COL1A1-211ENST00000507689 SGMS1Q86VZ5 419 aa18.09■□□□□ 0.49
COL1A1-211ENST00000507689 FBXO16Q8IX29 292 aaPredicted RBP18.09■□□□□ 0.49
COL1A1-211ENST00000507689 RASEFQ8IZ41 740 aa18.09■□□□□ 0.49
COL1A1-211ENST00000507689 FANCBQ8NB91 859 aa18.09■□□□□ 0.49
COL1A1-211ENST00000507689 MTMR8Q96EF0 704 aa18.09■□□□□ 0.49
COL1A1-211ENST00000507689 RMDN3Q96TC7 470 aa18.09■□□□□ 0.49
COL1A1-211ENST00000507689 GPHNQ9NQX3 736 aaPredicted RBP18.09■□□□□ 0.49
COL1A1-211ENST00000507689 PDE4DIPQ5VU43 2346 aa18.08■□□□□ 0.48
COL1A1-211ENST00000507689 MOXD2PA6NHM9 499 aa18.08■□□□□ 0.48
COL1A1-211ENST00000507689 GCOM1H8Y6P7 765 aaPredicted RBP18.08■□□□□ 0.48
COL1A1-211ENST00000507689 POLR2MP0CAP2 368 aa18.08■□□□□ 0.48
COL1A1-211ENST00000507689 ADCK5Q3MIX3 580 aa18.08■□□□□ 0.48
COL1A1-211ENST00000507689 MORC4Q8TE76 937 aa18.08■□□□□ 0.48
COL1A1-211ENST00000507689 FERMT2Q96AC1 680 aa18.08■□□□□ 0.48
COL1A1-211ENST00000507689 GLT1D1Q96MS3 346 aa18.08■□□□□ 0.48
COL1A1-211ENST00000507689 PURBQ96QR8 312 aaKnown RBP18.08■□□□□ 0.48
COL1A1-211ENST00000507689 IWS1Q96ST2 819 aa18.08■□□□□ 0.48
COL1A1-211ENST00000507689 CCDC196A0A1B0GTZ2 297 aa18.07■□□□□ 0.48
COL1A1-211ENST00000507689 RXRAP19793 462 aa18.07■□□□□ 0.48
COL1A1-211ENST00000507689 EXOSC10Q01780 885 aaKnown RBP18.07■□□□□ 0.48
COL1A1-211ENST00000507689 STXBP2Q15833 593 aa18.07■□□□□ 0.48
COL1A1-211ENST00000507689 RTN1Q16799 776 aa18.07■□□□□ 0.48
COL1A1-211ENST00000507689 TLK2Q86UE8 772 aa18.07■□□□□ 0.48
COL1A1-211ENST00000507689 SYTL5Q8TDW5 730 aaPredicted RBP18.07■□□□□ 0.48
COL1A1-211ENST00000507689 SCFD2Q8WU76 684 aa18.07■□□□□ 0.48
COL1A1-211ENST00000507689 LENG1Q96BZ8 264 aaPredicted RBP18.07■□□□□ 0.48
COL1A1-211ENST00000507689 TCEANC2Q96MN5 208 aa18.07■□□□□ 0.48
COL1A1-211ENST00000507689 WDR11Q9BZH6 1224 aa18.07■□□□□ 0.48
COL1A1-211ENST00000507689 PHF24Q9UPV7 400 aa18.07■□□□□ 0.48
COL1A1-211ENST00000507689 ATP11BQ9Y2G3 1177 aa18.07■□□□□ 0.48
COL1A1-211ENST00000507689 Q9Y3F1 56 aa18.07■□□□□ 0.48
COL1A1-211ENST00000507689 SNX14Q9Y5W7 946 aa18.07■□□□□ 0.48
COL1A1-211ENST00000507689 FRMPD3Q5JV73 1810 aa18.07■□□□□ 0.48
COL1A1-211ENST00000507689 KLF18A0A0U1RQI7 1052 aa18.06■□□□□ 0.48
COL1A1-211ENST00000507689 GOLGA8AA7E2F4 631 aa18.06■□□□□ 0.48
COL1A1-211ENST00000507689 GOLGA8BA8MQT2 603 aa18.06■□□□□ 0.48
COL1A1-211ENST00000507689 NKRFO15226 690 aaKnown RBP eCLIP18.06■□□□□ 0.48
COL1A1-211ENST00000507689 DYNC1LI2O43237 492 aaPredicted RBP18.06■□□□□ 0.48
COL1A1-211ENST00000507689 CASTP20810 708 aaKnown RBP18.06■□□□□ 0.48
COL1A1-211ENST00000507689 GJA9P57773 515 aa18.06■□□□□ 0.48
COL1A1-211ENST00000507689 PPP2R5BQ15173 497 aa18.06■□□□□ 0.48
COL1A1-211ENST00000507689 KCNA10Q16322 511 aa18.06■□□□□ 0.48
COL1A1-211ENST00000507689 LRRC26Q2I0M4 334 aa18.06■□□□□ 0.48
COL1A1-211ENST00000507689 APOA5Q6Q788 366 aa18.06■□□□□ 0.48
COL1A1-211ENST00000507689 SLC39A5Q6ZMH5 540 aa18.06■□□□□ 0.48
COL1A1-211ENST00000507689 RAB11FIP4Q86YS3 637 aa18.06■□□□□ 0.48
COL1A1-211ENST00000507689 KCNB2Q92953 911 aa18.06■□□□□ 0.48
COL1A1-211ENST00000507689 STARD7Q9NQZ5 370 aa18.06■□□□□ 0.48
COL1A1-211ENST00000507689 TNRC18O15417 2968 aaPredicted RBP18.06■□□□□ 0.48
COL1A1-211ENST00000507689 A0A1W2PQ45 241 aaPredicted RBP18.05■□□□□ 0.48
COL1A1-211ENST00000507689 A0A1W2PQY0 241 aa18.05■□□□□ 0.48
COL1A1-211ENST00000507689 CYTH3O43739 400 aa18.05■□□□□ 0.48
COL1A1-211ENST00000507689 ADAMTS4O75173 837 aa18.05■□□□□ 0.48
COL1A1-211ENST00000507689 CST5P28325 142 aaPredicted RBP18.05■□□□□ 0.48
COL1A1-211ENST00000507689 ACLYP53396 1101 aa18.05■□□□□ 0.48
COL1A1-211ENST00000507689 RCAN1P53805 252 aa18.05■□□□□ 0.48
COL1A1-211ENST00000507689 RTP1P59025 263 aa18.05■□□□□ 0.48
COL1A1-211ENST00000507689 TTLL4Q14679 1199 aa18.05■□□□□ 0.48
COL1A1-211ENST00000507689 Q6ZUG5 572 aa18.05■□□□□ 0.48
COL1A1-211ENST00000507689 CCDC82Q8N4S0 544 aa18.05■□□□□ 0.48
COL1A1-211ENST00000507689 SMARCC2Q8TAQ2 1214 aa18.05■□□□□ 0.48
COL1A1-211ENST00000507689 TAAR1Q96RJ0 339 aa18.05■□□□□ 0.48
COL1A1-211ENST00000507689 LBHD1Q9BQE6 289 aaPredicted RBP18.05■□□□□ 0.48
COL1A1-211ENST00000507689 KATNBL1Q9H079 304 aa18.05■□□□□ 0.48
COL1A1-211ENST00000507689 UPF3AQ9H1J1 476 aaKnown RBP18.05■□□□□ 0.48
COL1A1-211ENST00000507689 ZMYND8Q9ULU4 1186 aaPredicted RBP18.05■□□□□ 0.48
COL1A1-211ENST00000507689 CYP46A1Q9Y6A2 500 aa18.05■□□□□ 0.48
COL1A1-211ENST00000507689 ASTN1O14525 1302 aa18.04■□□□□ 0.48
COL1A1-211ENST00000507689 MYH6P13533 1939 aa18.04■□□□□ 0.48
COL1A1-211ENST00000507689 PPP1R11O60927 126 aaPredicted RBP18.04■□□□□ 0.48
COL1A1-211ENST00000507689 CABYRO75952 493 aa18.04■□□□□ 0.48
COL1A1-211ENST00000507689 PLEKHA8P1O95397 391 aa18.04■□□□□ 0.48
COL1A1-211ENST00000507689 SMPD1P17405 629 aa18.04■□□□□ 0.48
COL1A1-211ENST00000507689 EIF2AK2P19525 551 aaKnown RBP18.04■□□□□ 0.48
COL1A1-211ENST00000507689 RPS6KB1P23443 525 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms