RNA–Protein interactions for RNA: ENST00000507472.5

SSBP2-207, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 3

Gene SSBP2, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-207ENST00000507472 CDX2Q99626 313 aaPredicted RBP18.6■□□□□ 0.57
SSBP2-207ENST00000507472 DSCC1Q9BVC3 393 aa18.6■□□□□ 0.57
SSBP2-207ENST00000507472 CPVLQ9H3G5 476 aa18.6■□□□□ 0.57
SSBP2-207ENST00000507472 ZSWIM5Q9P217 1185 aa18.6■□□□□ 0.57
SSBP2-207ENST00000507472 UNC80Q8N2C7 3258 aa18.6■□□□□ 0.57
SSBP2-207ENST00000507472 WDR19Q8NEZ3 1342 aa18.59■□□□□ 0.57
SSBP2-207ENST00000507472 B4E1Z4 1266 aa18.59■□□□□ 0.57
SSBP2-207ENST00000507472 TLR3O15455 904 aaKnown RBP18.59■□□□□ 0.57
SSBP2-207ENST00000507472 ZEB2O60315 1214 aa18.59■□□□□ 0.57
SSBP2-207ENST00000507472 RPS6P62753 249 aaKnown RBP18.59■□□□□ 0.57
SSBP2-207ENST00000507472 ITGA7Q13683 1181 aa18.59■□□□□ 0.57
SSBP2-207ENST00000507472 DUSP28Q4G0W2 176 aa18.59■□□□□ 0.57
SSBP2-207ENST00000507472 CCDC178Q5BJE1 867 aa18.59■□□□□ 0.57
SSBP2-207ENST00000507472 PNMA1Q8ND90 353 aa18.59■□□□□ 0.57
SSBP2-207ENST00000507472 ANKS1AQ92625 1134 aa18.59■□□□□ 0.57
SSBP2-207ENST00000507472 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.59■□□□□ 0.57
SSBP2-207ENST00000507472 WDR11Q9BZH6 1224 aa18.59■□□□□ 0.57
SSBP2-207ENST00000507472 PPP1R12CQ9BZL4 782 aa18.59■□□□□ 0.57
SSBP2-207ENST00000507472 TTYH1Q9H313 450 aaPredicted RBP18.59■□□□□ 0.57
SSBP2-207ENST00000507472 LOC102724159A0A0B4J2E5 919 aa18.58■□□□□ 0.56
SSBP2-207ENST00000507472 CSF2RAP15509 400 aa18.58■□□□□ 0.56
SSBP2-207ENST00000507472 NT5C2P49902 561 aa18.58■□□□□ 0.56
SSBP2-207ENST00000507472 PSMC6P62333 389 aa18.58■□□□□ 0.56
SSBP2-207ENST00000507472 PWP2Q15269 919 aaKnown RBP18.58■□□□□ 0.56
SSBP2-207ENST00000507472 IMMTQ16891 758 aaKnown RBP18.58■□□□□ 0.56
SSBP2-207ENST00000507472 TMEM199Q8N511 208 aa18.58■□□□□ 0.56
SSBP2-207ENST00000507472 ZSCAN10Q96SZ4 725 aaPredicted RBP18.58■□□□□ 0.56
SSBP2-207ENST00000507472 KAT14Q9H8E8 782 aa18.58■□□□□ 0.56
SSBP2-207ENST00000507472 SUPT16HQ9Y5B9 1047 aaKnown RBP18.58■□□□□ 0.56
SSBP2-207ENST00000507472 CDH23Q9H251 3354 aa18.57■□□□□ 0.56
SSBP2-207ENST00000507472 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.57■□□□□ 0.56
SSBP2-207ENST00000507472 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.57■□□□□ 0.56
SSBP2-207ENST00000507472 RBM47A0AV96 593 aaKnown RBP18.57■□□□□ 0.56
SSBP2-207ENST00000507472 CYP2C18P33260 490 aa18.57■□□□□ 0.56
SSBP2-207ENST00000507472 PPIGQ13427 754 aaKnown RBP eCLIP18.57■□□□□ 0.56
SSBP2-207ENST00000507472 USH1GQ495M9 461 aa18.57■□□□□ 0.56
SSBP2-207ENST00000507472 TMEM240Q5SV17 173 aa18.57■□□□□ 0.56
SSBP2-207ENST00000507472 ENAHQ8N8S7 591 aaPredicted RBP18.57■□□□□ 0.56
SSBP2-207ENST00000507472 TRPV6Q9H1D0 765 aa18.57■□□□□ 0.56
SSBP2-207ENST00000507472 IL25Q9H293 177 aa18.57■□□□□ 0.56
SSBP2-207ENST00000507472 CTNNA3Q9UI47 895 aa18.57■□□□□ 0.56
SSBP2-207ENST00000507472 PRUNE2Q8WUY3 3088 aa18.57■□□□□ 0.56
SSBP2-207ENST00000507472 ACRP10323 421 aa18.56■□□□□ 0.56
SSBP2-207ENST00000507472 PDE4AP27815 886 aa18.56■□□□□ 0.56
SSBP2-207ENST00000507472 PDE4DQ08499 809 aa18.56■□□□□ 0.56
SSBP2-207ENST00000507472 ADGRF4Q8IZF3 695 aa18.56■□□□□ 0.56
SSBP2-207ENST00000507472 DNERQ8NFT8 737 aa18.56■□□□□ 0.56
SSBP2-207ENST00000507472 EYSQ5T1H1 3165 aa18.56■□□□□ 0.56
SSBP2-207ENST00000507472 LCTP09848 1927 aa18.55■□□□□ 0.56
SSBP2-207ENST00000507472 EDNRBP24530 442 aa18.55■□□□□ 0.56
SSBP2-207ENST00000507472 CDC37Q16543 378 aaPredicted RBP18.55■□□□□ 0.56
SSBP2-207ENST00000507472 ZNF365Q70YC5 407 aa18.55■□□□□ 0.56
SSBP2-207ENST00000507472 RGS22Q8NE09 1264 aa18.55■□□□□ 0.56
SSBP2-207ENST00000507472 TBC1D5Q92609 795 aa18.55■□□□□ 0.56
SSBP2-207ENST00000507472 SEZ6LQ9BYH1 1024 aa18.55■□□□□ 0.56
SSBP2-207ENST00000507472 KRT23Q9C075 422 aa18.55■□□□□ 0.56
SSBP2-207ENST00000507472 HIPK3Q9H422 1215 aa18.55■□□□□ 0.56
SSBP2-207ENST00000507472 TNKSO95271 1327 aa18.54■□□□□ 0.56
SSBP2-207ENST00000507472 UMODL1Q5DID0 1318 aa18.54■□□□□ 0.56
SSBP2-207ENST00000507472 B4GALT4O60513 344 aa18.54■□□□□ 0.56
SSBP2-207ENST00000507472 GSPT1P15170 499 aaKnown RBP18.54■□□□□ 0.56
SSBP2-207ENST00000507472 ASPRV1Q53RT3 343 aa18.54■□□□□ 0.56
SSBP2-207ENST00000507472 MYLIPQ8WY64 445 aa18.54■□□□□ 0.56
SSBP2-207ENST00000507472 MPHOSPH6Q99547 160 aaKnown RBP18.54■□□□□ 0.56
SSBP2-207ENST00000507472 VAT1LQ9HCJ6 419 aa18.54■□□□□ 0.56
SSBP2-207ENST00000507472 PARP1P09874 1014 aaKnown RBP18.53■□□□□ 0.56
SSBP2-207ENST00000507472 DNAJB2P25686 324 aa18.53■□□□□ 0.56
SSBP2-207ENST00000507472 CPT1AP50416 773 aa18.53■□□□□ 0.56
SSBP2-207ENST00000507472 PURAQ00577 322 aaKnown RBP18.53■□□□□ 0.56
SSBP2-207ENST00000507472 RASIP1Q5U651 963 aa18.53■□□□□ 0.56
SSBP2-207ENST00000507472 OR6J1Q8NGC5 347 aa18.53■□□□□ 0.56
SSBP2-207ENST00000507472 UBAC1Q9BSL1 405 aa18.53■□□□□ 0.56
SSBP2-207ENST00000507472 NOC4LQ9BVI4 516 aaKnown RBP18.53■□□□□ 0.56
SSBP2-207ENST00000507472 CNNM2Q9H8M5 875 aa18.53■□□□□ 0.56
SSBP2-207ENST00000507472 IL23AQ9NPF7 189 aa18.53■□□□□ 0.56
SSBP2-207ENST00000507472 POLR3EQ9NVU0 708 aa18.53■□□□□ 0.56
SSBP2-207ENST00000507472 TMEM265A0A087WTH1 108 aa18.52■□□□□ 0.56
SSBP2-207ENST00000507472 GRXCR1A8MXD5 290 aa18.52■□□□□ 0.56
SSBP2-207ENST00000507472 B4DLN1 442 aa18.52■□□□□ 0.56
SSBP2-207ENST00000507472 DHX16O60231 1041 aaKnown RBP18.52■□□□□ 0.56
SSBP2-207ENST00000507472 MYL3P08590 195 aa18.52■□□□□ 0.56
SSBP2-207ENST00000507472 MRPL12P52815 198 aaKnown RBP18.52■□□□□ 0.56
SSBP2-207ENST00000507472 CCL23P55773 120 aa18.52■□□□□ 0.56
SSBP2-207ENST00000507472 PPP2R5BQ15173 497 aa18.52■□□□□ 0.56
SSBP2-207ENST00000507472 QRICH1Q2TAL8 776 aa18.52■□□□□ 0.56
SSBP2-207ENST00000507472 TTC22Q5TAA0 569 aa18.52■□□□□ 0.56
SSBP2-207ENST00000507472 PSRC1Q6PGN9 363 aaPredicted RBP18.52■□□□□ 0.56
SSBP2-207ENST00000507472 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.52■□□□□ 0.56
SSBP2-207ENST00000507472 SCFD2Q8WU76 684 aa18.52■□□□□ 0.56
SSBP2-207ENST00000507472 COPS5Q92905 334 aa18.52■□□□□ 0.56
SSBP2-207ENST00000507472 TAAR1Q96RJ0 339 aa18.52■□□□□ 0.56
SSBP2-207ENST00000507472 ALDH8A1Q9H2A2 487 aaPredicted RBP18.52■□□□□ 0.56
SSBP2-207ENST00000507472 JMJD4Q9H9V9 463 aa18.52■□□□□ 0.56
SSBP2-207ENST00000507472 GPHNQ9NQX3 736 aaPredicted RBP18.52■□□□□ 0.56
SSBP2-207ENST00000507472 MYO9BQ13459 2157 aa18.52■□□□□ 0.56
SSBP2-207ENST00000507472 LRRC37A2A6NM11 1700 aa18.52■□□□□ 0.55
SSBP2-207ENST00000507472 ABCB11O95342 1321 aa18.51■□□□□ 0.55
SSBP2-207ENST00000507472 NKRFO15226 690 aaKnown RBP eCLIP18.51■□□□□ 0.55
SSBP2-207ENST00000507472 TXNP10599 105 aaKnown RBP18.51■□□□□ 0.55
SSBP2-207ENST00000507472 GRIN2CQ14957 1233 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms