RNA–Protein interactions for RNA: ENST00000507226.1

CCHCR1-221, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 544 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-221ENST00000507226 MAMDC4Q6UXC1 1216 aa20.59■□□□□ 0.89
CCHCR1-221ENST00000507226 HEATR3Q7Z4Q2 680 aa20.59■□□□□ 0.89
CCHCR1-221ENST00000507226 MSL3Q8N5Y2 521 aaKnown RBP20.59■□□□□ 0.89
CCHCR1-221ENST00000507226 SYTL5Q8TDW5 730 aaPredicted RBP20.59■□□□□ 0.89
CCHCR1-221ENST00000507226 PHKBQ93100 1093 aa20.59■□□□□ 0.89
CCHCR1-221ENST00000507226 PRPF3O43395 683 aaKnown RBP20.58■□□□□ 0.89
CCHCR1-221ENST00000507226 PPFIA3O75145 1194 aa20.58■□□□□ 0.89
CCHCR1-221ENST00000507226 CFBP00751 764 aa20.58■□□□□ 0.89
CCHCR1-221ENST00000507226 HSD17B4P51659 736 aa20.58■□□□□ 0.89
CCHCR1-221ENST00000507226 WWC2Q6AWC2 1192 aa20.58■□□□□ 0.89
CCHCR1-221ENST00000507226 TRPV1Q8NER1 839 aa20.58■□□□□ 0.89
CCHCR1-221ENST00000507226 GPKOWQ92917 476 aaPredicted RBP eCLIP20.58■□□□□ 0.895e-9■■■■□ 21.7
CCHCR1-221ENST00000507226 COL20A1Q9P218 1284 aa20.58■□□□□ 0.89
CCHCR1-221ENST00000507226 RPTORQ8N122 1335 aa20.57■□□□□ 0.88
CCHCR1-221ENST00000507226 SYNGAP1Q96PV0 1343 aa20.57■□□□□ 0.88
CCHCR1-221ENST00000507226 CPLX1O14810 134 aa20.57■□□□□ 0.88
CCHCR1-221ENST00000507226 SNAI1O95863 264 aaPredicted RBP20.57■□□□□ 0.88
CCHCR1-221ENST00000507226 CYBAP13498 195 aa20.57■□□□□ 0.88
CCHCR1-221ENST00000507226 PRAMEF19Q5SWL8 479 aa20.57■□□□□ 0.88
CCHCR1-221ENST00000507226 NECAB1Q8N987 351 aa20.57■□□□□ 0.88
CCHCR1-221ENST00000507226 SLC26A6Q9BXS9 759 aa20.57■□□□□ 0.88
CCHCR1-221ENST00000507226 RNF26Q9BY78 433 aaPredicted RBP20.57■□□□□ 0.88
CCHCR1-221ENST00000507226 RNF208Q9H0X6 261 aa20.57■□□□□ 0.88
CCHCR1-221ENST00000507226 HMX1Q9NP08 348 aaPredicted RBP20.57■□□□□ 0.88
CCHCR1-221ENST00000507226 GCOM1H8Y6P7 765 aaPredicted RBP20.56■□□□□ 0.88
CCHCR1-221ENST00000507226 POLR2MP0CAP2 368 aa20.56■□□□□ 0.88
CCHCR1-221ENST00000507226 CCND3P30281 292 aaPredicted RBP20.56■□□□□ 0.88
CCHCR1-221ENST00000507226 HOXA13P31271 388 aaPredicted RBP20.56■□□□□ 0.88
CCHCR1-221ENST00000507226 ALDH5A1P51649 535 aaPredicted RBP20.56■□□□□ 0.88
CCHCR1-221ENST00000507226 PKN1Q16512 942 aa20.56■□□□□ 0.88
CCHCR1-221ENST00000507226 PFKFB3Q16875 520 aaPredicted RBP20.56■□□□□ 0.88
CCHCR1-221ENST00000507226 TYW1BQ6NUM6 668 aa20.56■□□□□ 0.88
CCHCR1-221ENST00000507226 ARMCX2Q7L311 632 aa20.56■□□□□ 0.88
CCHCR1-221ENST00000507226 SAMD3Q8N6K7 520 aa20.56■□□□□ 0.88
CCHCR1-221ENST00000507226 TAAR1Q96RJ0 339 aa20.56■□□□□ 0.88
CCHCR1-221ENST00000507226 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.56■□□□□ 0.88
CCHCR1-221ENST00000507226 MAP3K20Q9NYL2 800 aaKnown RBP20.56■□□□□ 0.88
CCHCR1-221ENST00000507226 RBM27Q9P2N5 1060 aaKnown RBP20.56■□□□□ 0.88
CCHCR1-221ENST00000507226 ADD3Q9UEY8 706 aaKnown RBP20.56■□□□□ 0.88
CCHCR1-221ENST00000507226 LIMCH1Q9UPQ0 1083 aa20.56■□□□□ 0.88
CCHCR1-221ENST00000507226 DDX49Q9Y6V7 483 aaKnown RBP20.56■□□□□ 0.88
CCHCR1-221ENST00000507226 ASB14A6NK59 587 aa20.55■□□□□ 0.88
CCHCR1-221ENST00000507226 hCG_1984214I3L0E3 225 aa20.55■□□□□ 0.88
CCHCR1-221ENST00000507226 STXBP3O00186 592 aa20.55■□□□□ 0.88
CCHCR1-221ENST00000507226 SCG2P13521 617 aa20.55■□□□□ 0.88
CCHCR1-221ENST00000507226 AKAP17AQ02040 695 aaKnown RBP20.55■□□□□ 0.88
CCHCR1-221ENST00000507226 CPLX2Q6PUV4 134 aaKnown RBP20.55■□□□□ 0.88
CCHCR1-221ENST00000507226 ZNF713Q8N859 430 aaPredicted RBP20.55■□□□□ 0.88
CCHCR1-221ENST00000507226 DNERQ8NFT8 737 aa20.55■□□□□ 0.88
CCHCR1-221ENST00000507226 MORC4Q8TE76 937 aa20.55■□□□□ 0.88
CCHCR1-221ENST00000507226 GTF3C6Q969F1 213 aa20.55■□□□□ 0.88
CCHCR1-221ENST00000507226 TMEM106CQ9BVX2 250 aa20.55■□□□□ 0.88
CCHCR1-221ENST00000507226 PAK6Q9NQU5 681 aaPredicted RBP20.55■□□□□ 0.88
CCHCR1-221ENST00000507226 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.55■□□□□ 0.88
CCHCR1-221ENST00000507226 BARHL2Q9NY43 387 aa20.55■□□□□ 0.88
CCHCR1-221ENST00000507226 NRBP1Q9UHY1 535 aa20.55■□□□□ 0.88
CCHCR1-221ENST00000507226 ZNF865P0CJ78 1059 aaPredicted RBP20.54■□□□□ 0.88
CCHCR1-221ENST00000507226 NAPAP54920 295 aa20.54■□□□□ 0.88
CCHCR1-221ENST00000507226 SSRP1Q08945 709 aaKnown RBP20.54■□□□□ 0.88
CCHCR1-221ENST00000507226 CNPY2Q9Y2B0 182 aa20.54■□□□□ 0.88
CCHCR1-221ENST00000507226 DOCK3Q8IZD9 2030 aa20.53■□□□□ 0.88
CCHCR1-221ENST00000507226 HTTP42858 3142 aa20.53■□□□□ 0.88
CCHCR1-221ENST00000507226 LOC102724159A0A0B4J2E5 919 aa20.53■□□□□ 0.88
CCHCR1-221ENST00000507226 POTEFA5A3E0 1075 aa20.53■□□□□ 0.88
CCHCR1-221ENST00000507226 MEIS2O14770 477 aa20.53■□□□□ 0.88
CCHCR1-221ENST00000507226 CTDNEP1O95476 244 aa20.53■□□□□ 0.88
CCHCR1-221ENST00000507226 GJB1P08034 283 aa20.53■□□□□ 0.88
CCHCR1-221ENST00000507226 SOX10P56693 466 aa20.53■□□□□ 0.88
CCHCR1-221ENST00000507226 ST3GAL1Q11201 340 aa20.53■□□□□ 0.88
CCHCR1-221ENST00000507226 PWP2Q15269 919 aaKnown RBP20.53■□□□□ 0.88
CCHCR1-221ENST00000507226 PPP1R18Q6NYC8 613 aa20.53■□□□□ 0.88
CCHCR1-221ENST00000507226 TRIM22Q8IYM9 498 aa20.53■□□□□ 0.88
CCHCR1-221ENST00000507226 IL27Q8NEV9 243 aa20.53■□□□□ 0.88
CCHCR1-221ENST00000507226 KATNBL1Q9H079 304 aa20.53■□□□□ 0.88
CCHCR1-221ENST00000507226 PSTPIP2Q9H939 334 aa20.53■□□□□ 0.88
CCHCR1-221ENST00000507226 PIK3CDO00329 1044 aa20.52■□□□□ 0.88
CCHCR1-221ENST00000507226 ST18O60284 1047 aa20.52■□□□□ 0.88
CCHCR1-221ENST00000507226 DTNBO60941 627 aa20.52■□□□□ 0.88
CCHCR1-221ENST00000507226 CDKL5O76039 1030 aa20.52■□□□□ 0.88
CCHCR1-221ENST00000507226 EDNRBP24530 442 aa20.52■□□□□ 0.88
CCHCR1-221ENST00000507226 USP17L6PQ6QN14 398 aa20.52■□□□□ 0.88
CCHCR1-221ENST00000507226 NSUN6Q8TEA1 469 aaKnown RBP20.52■□□□□ 0.88
CCHCR1-221ENST00000507226 ZSCAN31Q96LW9 406 aaPredicted RBP20.52■□□□□ 0.88
CCHCR1-221ENST00000507226 DEFB118Q96PH6 123 aa20.52■□□□□ 0.88
CCHCR1-221ENST00000507226 RMDN3Q96TC7 470 aa20.52■□□□□ 0.88
CCHCR1-221ENST00000507226 CD2BP2O95400 341 aaKnown RBP20.51■□□□□ 0.87
CCHCR1-221ENST00000507226 CNGA1P29973 690 aa20.51■□□□□ 0.87
CCHCR1-221ENST00000507226 ACVR2BQ13705 512 aa20.51■□□□□ 0.87
CCHCR1-221ENST00000507226 FCHSD1Q86WN1 690 aa20.51■□□□□ 0.87
CCHCR1-221ENST00000507226 SMARCC2Q8TAQ2 1214 aa20.51■□□□□ 0.87
CCHCR1-221ENST00000507226 CUL5Q93034 780 aa20.51■□□□□ 0.87
CCHCR1-221ENST00000507226 ABHD16BQ9H3Z7 469 aa20.51■□□□□ 0.87
CCHCR1-221ENST00000507226 PXMP2Q9NR77 195 aa20.51■□□□□ 0.87
CCHCR1-221ENST00000507226 ZHX1Q9UKY1 873 aaPredicted RBP20.51■□□□□ 0.87
CCHCR1-221ENST00000507226 SMCO2A6NFE2 343 aa20.5■□□□□ 0.87
CCHCR1-221ENST00000507226 SEPT4O43236 478 aa20.5■□□□□ 0.87
CCHCR1-221ENST00000507226 DEXIO95424 95 aa20.5■□□□□ 0.87
CCHCR1-221ENST00000507226 EIF2AK2P19525 551 aaKnown RBP20.5■□□□□ 0.87
CCHCR1-221ENST00000507226 PDE4DQ08499 809 aa20.5■□□□□ 0.87
CCHCR1-221ENST00000507226 UBE2SQ16763 222 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms