RNA–Protein interactions for RNA: ENST00000507046.5

DDR1-259, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-259ENST00000507046 UPF3BQ9BZI7 483 aaKnown RBP23■■□□□ 1.27
DDR1-259ENST00000507046 GTF3C3Q9Y5Q9 886 aa23■■□□□ 1.27
DDR1-259ENST00000507046 LOC102724159A0A0B4J2E5 919 aa22.99■■□□□ 1.27
DDR1-259ENST00000507046 CCDC196A0A1B0GTZ2 297 aa22.99■■□□□ 1.27
DDR1-259ENST00000507046 SNAI1O95863 264 aaPredicted RBP22.99■■□□□ 1.27
DDR1-259ENST00000507046 PWP2Q15269 919 aaKnown RBP22.99■■□□□ 1.27
DDR1-259ENST00000507046 CMTR1Q8N1G2 835 aaKnown RBP22.99■■□□□ 1.27
DDR1-259ENST00000507046 ABHD16BQ9H3Z7 469 aa22.99■■□□□ 1.27
DDR1-259ENST00000507046 ZHX1Q9UKY1 873 aaPredicted RBP22.99■■□□□ 1.27
DDR1-259ENST00000507046 OGDHLQ9ULD0 1010 aa22.99■■□□□ 1.27
DDR1-259ENST00000507046 LCTP09848 1927 aa22.99■■□□□ 1.27
DDR1-259ENST00000507046 FARP2O94887 1054 aaPredicted RBP22.98■■□□□ 1.27
DDR1-259ENST00000507046 SEC24BO95487 1268 aa22.98■■□□□ 1.27
DDR1-259ENST00000507046 AKR1A1P14550 325 aa22.98■■□□□ 1.27
DDR1-259ENST00000507046 ALDH5A1P51649 535 aaPredicted RBP22.98■■□□□ 1.27
DDR1-259ENST00000507046 CCDC82Q8N4S0 544 aa22.98■■□□□ 1.27
DDR1-259ENST00000507046 ANKLE1Q8NAG6 615 aa22.98■■□□□ 1.27
DDR1-259ENST00000507046 DNERQ8NFT8 737 aa22.98■■□□□ 1.27
DDR1-259ENST00000507046 PDRG1Q9NUG6 133 aa22.98■■□□□ 1.27
DDR1-259ENST00000507046 FRMPD3Q5JV73 1810 aa22.98■■□□□ 1.27
DDR1-259ENST00000507046 NID2Q14112 1375 aa22.98■■□□□ 1.27
DDR1-259ENST00000507046 B4DLN1 442 aa22.97■■□□□ 1.27
DDR1-259ENST00000507046 CFBP00751 764 aa22.97■■□□□ 1.27
DDR1-259ENST00000507046 ZNF865P0CJ78 1059 aaPredicted RBP22.97■■□□□ 1.27
DDR1-259ENST00000507046 MRPL12P52815 198 aaKnown RBP22.97■■□□□ 1.27
DDR1-259ENST00000507046 LHX8Q68G74 356 aa22.97■■□□□ 1.27
DDR1-259ENST00000507046 PURBQ96QR8 312 aaKnown RBP22.97■■□□□ 1.27
DDR1-259ENST00000507046 MAP3K20Q9NYL2 800 aaKnown RBP22.97■■□□□ 1.27
DDR1-259ENST00000507046 ASTN1O14525 1302 aa22.97■■□□□ 1.27
DDR1-259ENST00000507046 CNTNAP5Q8WYK1 1306 aa22.97■■□□□ 1.27
DDR1-259ENST00000507046 BAZ2BQ9UIF8 2168 aaKnown RBP22.97■■□□□ 1.27
DDR1-259ENST00000507046 BRCA2P51587 3418 aa22.96■■□□□ 1.27
DDR1-259ENST00000507046 ACVR2BQ13705 512 aa22.96■■□□□ 1.27
DDR1-259ENST00000507046 TOB2Q14106 344 aaPredicted RBP22.96■■□□□ 1.27
DDR1-259ENST00000507046 SAMD3Q8N6K7 520 aa22.96■■□□□ 1.27
DDR1-259ENST00000507046 SYTL5Q8TDW5 730 aaPredicted RBP22.96■■□□□ 1.27
DDR1-259ENST00000507046 LRRC37A2A6NM11 1700 aa22.96■■□□□ 1.27
DDR1-259ENST00000507046 MCM3APO60318 1980 aa22.95■■□□□ 1.26
DDR1-259ENST00000507046 RARBP10826 455 aa22.95■■□□□ 1.26
DDR1-259ENST00000507046 CDC27P30260 824 aa22.95■■□□□ 1.26
DDR1-259ENST00000507046 EVCP57679 992 aa22.95■■□□□ 1.26
DDR1-259ENST00000507046 GHRHRQ02643 423 aa22.95■■□□□ 1.26
DDR1-259ENST00000507046 IL17RAQ96F46 866 aa22.95■■□□□ 1.26
DDR1-259ENST00000507046 FAM184BQ9ULE4 1060 aa22.95■■□□□ 1.26
DDR1-259ENST00000507046 GCOM1H8Y6P7 765 aaPredicted RBP22.94■■□□□ 1.26
DDR1-259ENST00000507046 OPLAHO14841 1288 aa22.94■■□□□ 1.26
DDR1-259ENST00000507046 POLR2MP0CAP2 368 aa22.94■■□□□ 1.26
DDR1-259ENST00000507046 HSD17B4P51659 736 aa22.94■■□□□ 1.26
DDR1-259ENST00000507046 PDE4DQ08499 809 aa22.94■■□□□ 1.26
DDR1-259ENST00000507046 ANO1Q5XXA6 986 aa22.94■■□□□ 1.26
DDR1-259ENST00000507046 MORC4Q8TE76 937 aa22.94■■□□□ 1.26
DDR1-259ENST00000507046 TBC1D5Q92609 795 aa22.94■■□□□ 1.26
DDR1-259ENST00000507046 NSUN6Q8TEA1 469 aaKnown RBP22.93■■□□□ 1.26
DDR1-259ENST00000507046 KATNBL1Q9H079 304 aa22.93■■□□□ 1.26
DDR1-259ENST00000507046 VTA1Q9NP79 307 aa22.93■■□□□ 1.26
DDR1-259ENST00000507046 FAM217BQ9NTX9 383 aaPredicted RBP22.93■■□□□ 1.26
DDR1-259ENST00000507046 hCG_1642624A0A1W2PR95 340 aa22.92■■□□□ 1.26
DDR1-259ENST00000507046 PDIA3P30101 505 aaKnown RBP22.92■■□□□ 1.26
DDR1-259ENST00000507046 ADD1P35611 737 aaKnown RBP22.92■■□□□ 1.26
DDR1-259ENST00000507046 FUT2Q10981 343 aa22.92■■□□□ 1.26
DDR1-259ENST00000507046 ANKRD1Q15327 319 aa22.92■■□□□ 1.26
DDR1-259ENST00000507046 CCDC144BQ3MJ40 725 aa22.92■■□□□ 1.26
DDR1-259ENST00000507046 HEATR3Q7Z4Q2 680 aa22.92■■□□□ 1.26
DDR1-259ENST00000507046 UBE2Q1Q7Z7E8 422 aa22.92■■□□□ 1.26
DDR1-259ENST00000507046 FBXO16Q8IX29 292 aaPredicted RBP22.92■■□□□ 1.26
DDR1-259ENST00000507046 ARRDC4Q8NCT1 418 aa22.92■■□□□ 1.26
DDR1-259ENST00000507046 CUL5Q93034 780 aa22.92■■□□□ 1.26
DDR1-259ENST00000507046 TAAR1Q96RJ0 339 aa22.92■■□□□ 1.26
DDR1-259ENST00000507046 RMDN3Q96TC7 470 aa22.92■■□□□ 1.26
DDR1-259ENST00000507046 XPNPEP3Q9NQH7 507 aa22.92■■□□□ 1.26
DDR1-259ENST00000507046 COL20A1Q9P218 1284 aa22.92■■□□□ 1.26
DDR1-259ENST00000507046 hCG_1984214I3L0E3 225 aa22.91■■□□□ 1.26
DDR1-259ENST00000507046 EDNRBP24530 442 aa22.91■■□□□ 1.26
DDR1-259ENST00000507046 HOXA13P31271 388 aaPredicted RBP22.91■■□□□ 1.26
DDR1-259ENST00000507046 ARHGEF16Q5VV41 709 aa22.91■■□□□ 1.26
DDR1-259ENST00000507046 EEPD1Q7L9B9 569 aa22.91■■□□□ 1.26
DDR1-259ENST00000507046 NECAB2Q7Z6G3 386 aa22.91■■□□□ 1.26
DDR1-259ENST00000507046 ZNF713Q8N859 430 aaPredicted RBP22.91■■□□□ 1.26
DDR1-259ENST00000507046 ZNF274Q96GC6 653 aaPredicted RBP22.91■■□□□ 1.26
DDR1-259ENST00000507046 ALDH8A1Q9H2A2 487 aaPredicted RBP22.91■■□□□ 1.26
DDR1-259ENST00000507046 UPF2Q9HAU5 1272 aaKnown RBP22.91■■□□□ 1.26
DDR1-259ENST00000507046 RBM27Q9P2N5 1060 aaKnown RBP22.91■■□□□ 1.26
DDR1-259ENST00000507046 DDX49Q9Y6V7 483 aaKnown RBP22.91■■□□□ 1.26
DDR1-259ENST00000507046 DNM1LO00429 736 aa22.9■■□□□ 1.26
DDR1-259ENST00000507046 CCT2P78371 535 aaKnown RBP22.9■■□□□ 1.26
DDR1-259ENST00000507046 DIS3LQ8TF46 1054 aaKnown RBP22.9■■□□□ 1.26
DDR1-259ENST00000507046 GPKOWQ92917 476 aaPredicted RBP eCLIP22.9■■□□□ 1.26
DDR1-259ENST00000507046 PAWRQ96IZ0 340 aaKnown RBP22.9■■□□□ 1.26
DDR1-259ENST00000507046 IWS1Q96ST2 819 aa22.9■■□□□ 1.26
DDR1-259ENST00000507046 V9GY48 417 aaPredicted RBP22.9■■□□□ 1.26
DDR1-259ENST00000507046 KBTBD13C9JR72 458 aa22.89■■□□□ 1.25
DDR1-259ENST00000507046 DUSP11O75319 330 aaKnown RBP22.89■■□□□ 1.25
DDR1-259ENST00000507046 MYCNP04198 464 aaPredicted RBP22.89■■□□□ 1.25
DDR1-259ENST00000507046 AKAP17AQ02040 695 aaKnown RBP22.89■■□□□ 1.25
DDR1-259ENST00000507046 PPP1R18Q6NYC8 613 aa22.89■■□□□ 1.25
DDR1-259ENST00000507046 SMARCC2Q8TAQ2 1214 aa22.89■■□□□ 1.25
DDR1-259ENST00000507046 LENG1Q96BZ8 264 aaPredicted RBP22.89■■□□□ 1.25
DDR1-259ENST00000507046 HTATIP2Q9BUP3 242 aa22.89■■□□□ 1.25
DDR1-259ENST00000507046 C11orf49Q9H6J7 331 aa22.89■■□□□ 1.25
DDR1-259ENST00000507046 PXMP2Q9NR77 195 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms