RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 GTF3C2Q8WUA4 911 aaPredicted RBP11.35□□□□□ -0.59
CLCN3-205ENST00000506924 FAM227BQ96M60 508 aa11.35□□□□□ -0.59
CLCN3-205ENST00000506924 DHX36Q9H2U1 1008 aaKnown RBP11.35□□□□□ -0.59
CLCN3-205ENST00000506924 DNAJC18Q9H819 358 aa11.35□□□□□ -0.59
CLCN3-205ENST00000506924 DCP1AQ9NPI6 582 aaPredicted RBP11.35□□□□□ -0.59
CLCN3-205ENST00000506924 CUEDC1Q9NWM3 386 aaPredicted RBP11.35□□□□□ -0.59
CLCN3-205ENST00000506924 NAV1Q8NEY1 1877 aa11.35□□□□□ -0.59
CLCN3-205ENST00000506924 BAZ2AQ9UIF9 1905 aaKnown RBP11.35□□□□□ -0.59
CLCN3-205ENST00000506924 COL2A1P02458 1487 aaPredicted RBP11.34□□□□□ -0.59
CLCN3-205ENST00000506924 UNCXA6NJT0 531 aa11.34□□□□□ -0.59
CLCN3-205ENST00000506924 TRPA1O75762 1119 aa11.34□□□□□ -0.59
CLCN3-205ENST00000506924 GDF11O95390 407 aa11.34□□□□□ -0.59
CLCN3-205ENST00000506924 APPP05067 770 aa11.34□□□□□ -0.59
CLCN3-205ENST00000506924 FAM157BP0CG42 384 aa11.34□□□□□ -0.59
CLCN3-205ENST00000506924 NPR3P17342 541 aa11.34□□□□□ -0.59
CLCN3-205ENST00000506924 JAG1P78504 1218 aa11.34□□□□□ -0.59
CLCN3-205ENST00000506924 MAP3K10Q02779 954 aa11.34□□□□□ -0.59
CLCN3-205ENST00000506924 DGKZQ13574 1117 aa11.34□□□□□ -0.59
CLCN3-205ENST00000506924 UBAP2LQ14157 1087 aaKnown RBP11.34□□□□□ -0.59
CLCN3-205ENST00000506924 LRRFIP1Q32MZ4 808 aaKnown RBP11.34□□□□□ -0.59
CLCN3-205ENST00000506924 ZMYM1Q5SVZ6 1142 aa11.34□□□□□ -0.59
CLCN3-205ENST00000506924 SV2AQ7L0J3 742 aa11.34□□□□□ -0.59
CLCN3-205ENST00000506924 CENPQQ7L2Z9 268 aaPredicted RBP11.34□□□□□ -0.59
CLCN3-205ENST00000506924 SAP130Q9H0E3 1048 aa11.34□□□□□ -0.59
CLCN3-205ENST00000506924 PICK1Q9NRD5 415 aa11.34□□□□□ -0.59
CLCN3-205ENST00000506924 STIM2Q9P246 746 aa11.34□□□□□ -0.59
CLCN3-205ENST00000506924 PCDHGC4Q9Y5F7 938 aa11.34□□□□□ -0.59
CLCN3-205ENST00000506924 A0A0D9SFI3 127 aa11.33□□□□□ -0.6
CLCN3-205ENST00000506924 GSG1L2A8MUP6 293 aa11.33□□□□□ -0.6
CLCN3-205ENST00000506924 CTNND1O60716 968 aaKnown RBP11.33□□□□□ -0.6
CLCN3-205ENST00000506924 THBS1P07996 1170 aa11.33□□□□□ -0.6
CLCN3-205ENST00000506924 ZBTB48P10074 688 aaPredicted RBP11.33□□□□□ -0.6
CLCN3-205ENST00000506924 GSPT1P15170 499 aaKnown RBP11.33□□□□□ -0.6
CLCN3-205ENST00000506924 PTPRAP18433 802 aa11.33□□□□□ -0.6
CLCN3-205ENST00000506924 NMIQ13287 307 aaPredicted RBP11.33□□□□□ -0.6
CLCN3-205ENST00000506924 NAA30Q147X3 362 aaPredicted RBP11.33□□□□□ -0.6
CLCN3-205ENST00000506924 NOL9Q5SY16 702 aaKnown RBP11.33□□□□□ -0.6
CLCN3-205ENST00000506924 TTC22Q5TAA0 569 aa11.33□□□□□ -0.6
CLCN3-205ENST00000506924 TTC6Q86TZ1 520 aa11.33□□□□□ -0.6
CLCN3-205ENST00000506924 ERO1BQ86YB8 467 aa11.33□□□□□ -0.6
CLCN3-205ENST00000506924 FOXP4Q8IVH2 680 aaPredicted RBP11.33□□□□□ -0.6
CLCN3-205ENST00000506924 SCYL3Q8IZE3 742 aa11.33□□□□□ -0.6
CLCN3-205ENST00000506924 SLC44A5Q8NCS7 719 aa11.33□□□□□ -0.6
CLCN3-205ENST00000506924 DYNLL2Q96FJ2 89 aa11.33□□□□□ -0.6
CLCN3-205ENST00000506924 CFHR5Q9BXR6 569 aa11.33□□□□□ -0.6
CLCN3-205ENST00000506924 ATP8A2Q9NTI2 1148 aa11.33□□□□□ -0.6
CLCN3-205ENST00000506924 RNF186Q9NXI6 227 aa11.33□□□□□ -0.6
CLCN3-205ENST00000506924 HERC5Q9UII4 1024 aaKnown RBP11.33□□□□□ -0.6
CLCN3-205ENST00000506924 PHF24Q9UPV7 400 aa11.33□□□□□ -0.6
CLCN3-205ENST00000506924 ZHX2Q9Y6X8 837 aa11.33□□□□□ -0.6
CLCN3-205ENST00000506924 DDX60LQ5H9U9 1706 aaKnown RBP11.32□□□□□ -0.6
CLCN3-205ENST00000506924 CCL15-CCL14A0A0B4J2E2 113 aa11.32□□□□□ -0.6
CLCN3-205ENST00000506924 MANSC4A6NHS7 340 aaPredicted RBP11.32□□□□□ -0.6
CLCN3-205ENST00000506924 MINDY4BA8MYZ0 360 aa11.32□□□□□ -0.6
CLCN3-205ENST00000506924 IGF2BP3O00425 579 aaKnown RBP eCLIP11.32□□□□□ -0.6
CLCN3-205ENST00000506924 TNFRSF10BO14763 440 aa11.32□□□□□ -0.6
CLCN3-205ENST00000506924 TBC1D8O95759 1140 aa11.32□□□□□ -0.6
CLCN3-205ENST00000506924 SDSP20132 328 aa11.32□□□□□ -0.6
CLCN3-205ENST00000506924 CAP2P40123 477 aa11.32□□□□□ -0.6
CLCN3-205ENST00000506924 LBX1P52954 281 aa11.32□□□□□ -0.6
CLCN3-205ENST00000506924 LAMC2Q13753 1193 aa11.32□□□□□ -0.6
CLCN3-205ENST00000506924 CCL15Q16663 113 aa11.32□□□□□ -0.6
CLCN3-205ENST00000506924 CTR9Q6PD62 1173 aa11.32□□□□□ -0.6
CLCN3-205ENST00000506924 PTPN18Q99952 460 aa11.32□□□□□ -0.6
CLCN3-205ENST00000506924 ZCCHC2Q9C0B9 1178 aaKnown RBP11.32□□□□□ -0.6
CLCN3-205ENST00000506924 EPB41L4AQ9HCS5 686 aaPredicted RBP11.32□□□□□ -0.6
CLCN3-205ENST00000506924 C11orf16Q9NQ32 467 aa11.32□□□□□ -0.6
CLCN3-205ENST00000506924 SERPINB13Q9UIV8 391 aa11.32□□□□□ -0.6
CLCN3-205ENST00000506924 DOCK1Q14185 1865 aa11.32□□□□□ -0.6
CLCN3-205ENST00000506924 ATAD5Q96QE3 1844 aa11.31□□□□□ -0.6
CLCN3-205ENST00000506924 TRIM75PA6NK02 468 aa11.31□□□□□ -0.6
CLCN3-205ENST00000506924 HSPA8P11142 646 aaKnown RBP11.31□□□□□ -0.6
CLCN3-205ENST00000506924 SCNN1AP37088 669 aa11.31□□□□□ -0.6
CLCN3-205ENST00000506924 TM4SF4P48230 202 aa11.31□□□□□ -0.6
CLCN3-205ENST00000506924 TDO2P48775 406 aa11.31□□□□□ -0.6
CLCN3-205ENST00000506924 PPATQ06203 517 aa11.31□□□□□ -0.6
CLCN3-205ENST00000506924 SREBF2Q12772 1141 aa11.31□□□□□ -0.6
CLCN3-205ENST00000506924 PPIL2Q13356 520 aa11.31□□□□□ -0.6
CLCN3-205ENST00000506924 VPS53Q5VIR6 699 aa11.31□□□□□ -0.6
CLCN3-205ENST00000506924 CWC27Q6UX04 472 aaKnown RBP11.31□□□□□ -0.6
CLCN3-205ENST00000506924 LRRC69Q6ZNQ3 347 aa11.31□□□□□ -0.6
CLCN3-205ENST00000506924 METTL16Q86W50 562 aaKnown RBP11.31□□□□□ -0.6
CLCN3-205ENST00000506924 BRI3BPQ8WY22 251 aa11.31□□□□□ -0.6
CLCN3-205ENST00000506924 IFT43Q96FT9 208 aa11.31□□□□□ -0.6
CLCN3-205ENST00000506924 TRERF1Q96PN7 1200 aa11.31□□□□□ -0.6
CLCN3-205ENST00000506924 NDFIP2Q9NV92 336 aa11.31□□□□□ -0.6
CLCN3-205ENST00000506924 KLK14Q9P0G3 267 aa11.31□□□□□ -0.6
CLCN3-205ENST00000506924 DMGDHQ9UI17 866 aaKnown RBP11.31□□□□□ -0.6
CLCN3-205ENST00000506924 ATXN7L1Q9ULK2 861 aaPredicted RBP11.31□□□□□ -0.6
CLCN3-205ENST00000506924 DNMT3AQ9Y6K1 912 aaPredicted RBP11.31□□□□□ -0.6
CLCN3-205ENST00000506924 MPHOSPH10O00566 681 aaKnown RBP11.3□□□□□ -0.6
CLCN3-205ENST00000506924 ICMTO60725 284 aa11.3□□□□□ -0.6
CLCN3-205ENST00000506924 FAM13AO94988 1023 aa11.3□□□□□ -0.6
CLCN3-205ENST00000506924 GH2P01242 217 aa11.3□□□□□ -0.6
CLCN3-205ENST00000506924 GNAT2P19087 354 aa11.3□□□□□ -0.6
CLCN3-205ENST00000506924 SHMT1P34896 483 aa11.3□□□□□ -0.6
CLCN3-205ENST00000506924 CTCFP49711 727 aaPredicted RBP11.3□□□□□ -0.6
CLCN3-205ENST00000506924 GTF2A2P52657 109 aa11.3□□□□□ -0.6
CLCN3-205ENST00000506924 SNAPC2Q13487 334 aa11.3□□□□□ -0.6
CLCN3-205ENST00000506924 CERKLQ49MI3 558 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms