RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 MCM3APO60318 1980 aa16.86■□□□□ 0.29
CDC42SE2-209ENST00000506419 RBM47A0AV96 593 aaKnown RBP16.85■□□□□ 0.29
CDC42SE2-209ENST00000506419 CYP21A2P08686 494 aa16.85■□□□□ 0.29
CDC42SE2-209ENST00000506419 RAG1P15918 1043 aa16.85■□□□□ 0.29
CDC42SE2-209ENST00000506419 FSCN1Q16658 493 aaKnown RBP16.85■□□□□ 0.29
CDC42SE2-209ENST00000506419 USH1GQ495M9 461 aa16.85■□□□□ 0.29
CDC42SE2-209ENST00000506419 TLK2Q86UE8 772 aa16.85■□□□□ 0.29
CDC42SE2-209ENST00000506419 STAG2Q8N3U4 1231 aa16.85■□□□□ 0.29
CDC42SE2-209ENST00000506419 SLC43A3Q8NBI5 491 aa16.85■□□□□ 0.29
CDC42SE2-209ENST00000506419 RGS22Q8NE09 1264 aa16.85■□□□□ 0.29
CDC42SE2-209ENST00000506419 AP5M1Q9H0R1 490 aa16.85■□□□□ 0.29
CDC42SE2-209ENST00000506419 JMJD4Q9H9V9 463 aa16.85■□□□□ 0.29
CDC42SE2-209ENST00000506419 ADD3Q9UEY8 706 aaKnown RBP16.85■□□□□ 0.29
CDC42SE2-209ENST00000506419 PNMA2Q9UL42 364 aa16.85■□□□□ 0.29
CDC42SE2-209ENST00000506419 Q9Y3F1 56 aa16.85■□□□□ 0.29
CDC42SE2-209ENST00000506419 A0A0U1RQG5 324 aaPredicted RBP16.84■□□□□ 0.29
CDC42SE2-209ENST00000506419 TIMP1P01033 207 aa16.84■□□□□ 0.29
CDC42SE2-209ENST00000506419 EDNRBP24530 442 aa16.84■□□□□ 0.29
CDC42SE2-209ENST00000506419 CDC37Q16543 378 aaPredicted RBP16.84■□□□□ 0.29
CDC42SE2-209ENST00000506419 DUSP28Q4G0W2 176 aa16.84■□□□□ 0.29
CDC42SE2-209ENST00000506419 WDR11Q9BZH6 1224 aa16.84■□□□□ 0.29
CDC42SE2-209ENST00000506419 CNNM2Q9H8M5 875 aa16.84■□□□□ 0.29
CDC42SE2-209ENST00000506419 SENP2Q9HC62 589 aa16.84■□□□□ 0.29
CDC42SE2-209ENST00000506419 LOC102724159A0A0B4J2E5 919 aa16.83■□□□□ 0.28
CDC42SE2-209ENST00000506419 SGSM2O43147 1006 aa16.83■□□□□ 0.28
CDC42SE2-209ENST00000506419 CD4P01730 458 aa16.83■□□□□ 0.28
CDC42SE2-209ENST00000506419 PARP1P09874 1014 aaKnown RBP16.83■□□□□ 0.28
CDC42SE2-209ENST00000506419 PWP2Q15269 919 aaKnown RBP16.83■□□□□ 0.28
CDC42SE2-209ENST00000506419 SLC35G1Q2M3R5 365 aa16.83■□□□□ 0.28
CDC42SE2-209ENST00000506419 QRICH1Q2TAL8 776 aa16.83■□□□□ 0.28
CDC42SE2-209ENST00000506419 ASPRV1Q53RT3 343 aa16.83■□□□□ 0.28
CDC42SE2-209ENST00000506419 C16orf59Q7L2K0 433 aa16.83■□□□□ 0.28
CDC42SE2-209ENST00000506419 FAM126BQ8IXS8 530 aa16.83■□□□□ 0.28
CDC42SE2-209ENST00000506419 TAAR1Q96RJ0 339 aa16.83■□□□□ 0.28
CDC42SE2-209ENST00000506419 A0A0C4DFX4 3053 aa16.83■□□□□ 0.28
CDC42SE2-209ENST00000506419 RAD50Q92878 1312 aa16.82■□□□□ 0.28
CDC42SE2-209ENST00000506419 PSMC6P62333 389 aa16.82■□□□□ 0.28
CDC42SE2-209ENST00000506419 IFIT1BQ5T764 474 aaKnown RBP16.82■□□□□ 0.28
CDC42SE2-209ENST00000506419 FAM109BQ6ICB4 259 aaPredicted RBP16.82■□□□□ 0.28
CDC42SE2-209ENST00000506419 STOX1Q6ZVD7 989 aa16.82■□□□□ 0.28
CDC42SE2-209ENST00000506419 SYTL5Q8TDW5 730 aaPredicted RBP16.82■□□□□ 0.28
CDC42SE2-209ENST00000506419 RUFY2Q8WXA3 655 aa16.82■□□□□ 0.28
CDC42SE2-209ENST00000506419 UBAC1Q9BSL1 405 aa16.82■□□□□ 0.28
CDC42SE2-209ENST00000506419 COL20A1Q9P218 1284 aa16.82■□□□□ 0.28
CDC42SE2-209ENST00000506419 MAD2L2Q9UI95 211 aa16.82■□□□□ 0.28
CDC42SE2-209ENST00000506419 PALM3A6NDB9 673 aaPredicted RBP16.81■□□□□ 0.28
CDC42SE2-209ENST00000506419 CABYRO75952 493 aa16.81■□□□□ 0.28
CDC42SE2-209ENST00000506419 ITGA7Q13683 1181 aa16.81■□□□□ 0.28
CDC42SE2-209ENST00000506419 MFSD5Q6N075 450 aa16.81■□□□□ 0.28
CDC42SE2-209ENST00000506419 CHST3Q7LGC8 479 aa16.81■□□□□ 0.28
CDC42SE2-209ENST00000506419 DNERQ8NFT8 737 aa16.81■□□□□ 0.28
CDC42SE2-209ENST00000506419 COPS5Q92905 334 aa16.81■□□□□ 0.28
CDC42SE2-209ENST00000506419 MAP4K1Q92918 833 aa16.81■□□□□ 0.28
CDC42SE2-209ENST00000506419 MTMR8Q96EF0 704 aa16.81■□□□□ 0.28
CDC42SE2-209ENST00000506419 U3KPZ7 1027 aaPredicted RBP16.81■□□□□ 0.28
CDC42SE2-209ENST00000506419 LTBP2Q14767 1821 aa16.81■□□□□ 0.28
CDC42SE2-209ENST00000506419 ABCB11O95342 1321 aa16.8■□□□□ 0.28
CDC42SE2-209ENST00000506419 MROH7Q68CQ1 1323 aa16.8■□□□□ 0.28
CDC42SE2-209ENST00000506419 KLRF2D3W0D1 207 aa16.8■□□□□ 0.28
CDC42SE2-209ENST00000506419 E7EWF7 191 aa16.8■□□□□ 0.28
CDC42SE2-209ENST00000506419 ZEB2O60315 1214 aa16.8■□□□□ 0.28
CDC42SE2-209ENST00000506419 PPP1R11O60927 126 aaPredicted RBP16.8■□□□□ 0.28
CDC42SE2-209ENST00000506419 FPGSQ05932 587 aa16.8■□□□□ 0.28
CDC42SE2-209ENST00000506419 PDE4DQ08499 809 aa16.8■□□□□ 0.28
CDC42SE2-209ENST00000506419 SKAP1Q86WV1 359 aa16.8■□□□□ 0.28
CDC42SE2-209ENST00000506419 FBXO11Q86XK2 927 aa16.8■□□□□ 0.28
CDC42SE2-209ENST00000506419 FAM161BQ96MY7 647 aa16.8■□□□□ 0.28
CDC42SE2-209ENST00000506419 GUCD1Q96NT3 240 aa16.8■□□□□ 0.28
CDC42SE2-209ENST00000506419 TRPV6Q9H1D0 765 aa16.8■□□□□ 0.28
CDC42SE2-209ENST00000506419 LCTP09848 1927 aa16.8■□□□□ 0.28
CDC42SE2-209ENST00000506419 OPLAHO14841 1288 aa16.79■□□□□ 0.28
CDC42SE2-209ENST00000506419 ARIH2O95376 493 aa16.79■□□□□ 0.28
CDC42SE2-209ENST00000506419 CYP2C18P33260 490 aa16.79■□□□□ 0.28
CDC42SE2-209ENST00000506419 ANTXR2P58335 489 aa16.79■□□□□ 0.28
CDC42SE2-209ENST00000506419 TRDNQ13061 729 aa16.79■□□□□ 0.28
CDC42SE2-209ENST00000506419 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.79■□□□□ 0.28
CDC42SE2-209ENST00000506419 SEMA6BQ9H3T3 888 aa16.79■□□□□ 0.28
CDC42SE2-209ENST00000506419 STXBP5LQ9Y2K9 1186 aa16.79■□□□□ 0.28
CDC42SE2-209ENST00000506419 MRPL11Q9Y3B7 192 aaKnown RBP16.79■□□□□ 0.28
CDC42SE2-209ENST00000506419 IFIT3O14879 490 aaKnown RBP16.78■□□□□ 0.28
CDC42SE2-209ENST00000506419 DHX16O60231 1041 aaKnown RBP16.78■□□□□ 0.28
CDC42SE2-209ENST00000506419 CSF2RAP15509 400 aa16.78■□□□□ 0.28
CDC42SE2-209ENST00000506419 COL9A3Q14050 684 aaPredicted RBP16.78■□□□□ 0.28
CDC42SE2-209ENST00000506419 TMEM240Q5SV17 173 aa16.78■□□□□ 0.28
CDC42SE2-209ENST00000506419 CCDC62Q6P9F0 684 aa16.78■□□□□ 0.28
CDC42SE2-209ENST00000506419 OR6J1Q8NGC5 347 aa16.78■□□□□ 0.28
CDC42SE2-209ENST00000506419 IGDCC4Q8TDY8 1250 aa16.78■□□□□ 0.28
CDC42SE2-209ENST00000506419 PPP1R12CQ9BZL4 782 aa16.78■□□□□ 0.28
CDC42SE2-209ENST00000506419 MAF1Q9H063 256 aa16.78■□□□□ 0.28
CDC42SE2-209ENST00000506419 GPHNQ9NQX3 736 aaPredicted RBP16.78■□□□□ 0.28
CDC42SE2-209ENST00000506419 UMODL1Q5DID0 1318 aa16.77■□□□□ 0.28
CDC42SE2-209ENST00000506419 TLR3O15455 904 aaKnown RBP16.77■□□□□ 0.28
CDC42SE2-209ENST00000506419 B4GALT4O60513 344 aa16.77■□□□□ 0.28
CDC42SE2-209ENST00000506419 MYL3P08590 195 aa16.77■□□□□ 0.28
CDC42SE2-209ENST00000506419 ACRP10323 421 aa16.77■□□□□ 0.28
CDC42SE2-209ENST00000506419 TXNP10599 105 aaKnown RBP16.77■□□□□ 0.28
CDC42SE2-209ENST00000506419 SMAD3P84022 425 aaKnown RBP16.77■□□□□ 0.28
CDC42SE2-209ENST00000506419 PURAQ00577 322 aaKnown RBP16.77■□□□□ 0.28
CDC42SE2-209ENST00000506419 TROAPQ12815 778 aa16.77■□□□□ 0.28
CDC42SE2-209ENST00000506419 GRM4Q14833 912 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms