RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 TMTC3Q6ZXV5 915 aa19.32■□□□□ 0.68
SNCA-209ENST00000506244 SAMD3Q8N6K7 520 aa19.32■□□□□ 0.68
SNCA-209ENST00000506244 ZSWIM6Q9HCJ5 1215 aa19.32■□□□□ 0.68
SNCA-209ENST00000506244 MAP3K20Q9NYL2 800 aaKnown RBP19.32■□□□□ 0.68
SNCA-209ENST00000506244 NAP1L2Q9ULW6 460 aaPredicted RBP19.32■□□□□ 0.68
SNCA-209ENST00000506244 LRRC37A2A6NM11 1700 aa19.31■□□□□ 0.68
SNCA-209ENST00000506244 PLEKHA8P1O95397 391 aa19.31■□□□□ 0.68
SNCA-209ENST00000506244 SNAI1O95863 264 aaPredicted RBP19.31■□□□□ 0.68
SNCA-209ENST00000506244 ZNF865P0CJ78 1059 aaPredicted RBP19.31■□□□□ 0.68
SNCA-209ENST00000506244 CPA1P15085 419 aa19.31■□□□□ 0.68
SNCA-209ENST00000506244 ALDH5A1P51649 535 aaPredicted RBP19.31■□□□□ 0.68
SNCA-209ENST00000506244 ACVR2BQ13705 512 aa19.31■□□□□ 0.68
SNCA-209ENST00000506244 SLC35G1Q2M3R5 365 aa19.31■□□□□ 0.68
SNCA-209ENST00000506244 PRAMEF19Q5SWL8 479 aa19.31■□□□□ 0.68
SNCA-209ENST00000506244 NECAB2Q7Z6G3 386 aa19.31■□□□□ 0.68
SNCA-209ENST00000506244 RAB11FIP4Q86YS3 637 aa19.31■□□□□ 0.68
SNCA-209ENST00000506244 BRF1Q92994 677 aa19.31■□□□□ 0.68
SNCA-209ENST00000506244 HTATIP2Q9BUP3 242 aa19.31■□□□□ 0.68
SNCA-209ENST00000506244 AGXT2Q9BYV1 514 aa19.31■□□□□ 0.68
SNCA-209ENST00000506244 BRPF3Q9ULD4 1205 aa19.31■□□□□ 0.68
SNCA-209ENST00000506244 FAM184BQ9ULE4 1060 aa19.31■□□□□ 0.68
SNCA-209ENST00000506244 PPP1R11O60927 126 aaPredicted RBP19.3■□□□□ 0.68
SNCA-209ENST00000506244 METAP2P50579 478 aaKnown RBP eCLIP19.3■□□□□ 0.68
SNCA-209ENST00000506244 UBE2Q1Q7Z7E8 422 aa19.3■□□□□ 0.68
SNCA-209ENST00000506244 SRBD1Q8N5C6 995 aaKnown RBP19.3■□□□□ 0.68
SNCA-209ENST00000506244 ARRDC4Q8NCT1 418 aa19.3■□□□□ 0.68
SNCA-209ENST00000506244 VTA1Q9NP79 307 aa19.3■□□□□ 0.68
SNCA-209ENST00000506244 NID2Q14112 1375 aa19.3■□□□□ 0.68
SNCA-209ENST00000506244 MCM3APO60318 1980 aa19.3■□□□□ 0.68
SNCA-209ENST00000506244 ASTN1O14525 1302 aa19.29■□□□□ 0.68
SNCA-209ENST00000506244 CFBP00751 764 aa19.29■□□□□ 0.68
SNCA-209ENST00000506244 GHRHRQ02643 423 aa19.29■□□□□ 0.68
SNCA-209ENST00000506244 APOBRQ0VD83 1088 aa19.29■□□□□ 0.68
SNCA-209ENST00000506244 MORC4Q8TE76 937 aa19.29■□□□□ 0.68
SNCA-209ENST00000506244 BAZ2BQ9UIF8 2168 aaKnown RBP19.29■□□□□ 0.68
SNCA-209ENST00000506244 KBTBD13C9JR72 458 aa19.28■□□□□ 0.68
SNCA-209ENST00000506244 DNM1LO00429 736 aa19.28■□□□□ 0.68
SNCA-209ENST00000506244 HSD17B4P51659 736 aa19.28■□□□□ 0.68
SNCA-209ENST00000506244 PDE4DQ08499 809 aa19.28■□□□□ 0.68
SNCA-209ENST00000506244 SYTL5Q8TDW5 730 aaPredicted RBP19.28■□□□□ 0.68
SNCA-209ENST00000506244 NSUN6Q8TEA1 469 aaKnown RBP19.28■□□□□ 0.68
SNCA-209ENST00000506244 PIBF1Q8WXW3 757 aa19.28■□□□□ 0.68
SNCA-209ENST00000506244 C11orf49Q9H6J7 331 aa19.28■□□□□ 0.68
SNCA-209ENST00000506244 XPNPEP3Q9NQH7 507 aa19.28■□□□□ 0.68
SNCA-209ENST00000506244 CNTNAP5Q8WYK1 1306 aa19.27■□□□□ 0.68
SNCA-209ENST00000506244 CMTR1Q8N1G2 835 aaKnown RBP19.27■□□□□ 0.68
SNCA-209ENST00000506244 PAWRQ96IZ0 340 aaKnown RBP19.27■□□□□ 0.68
SNCA-209ENST00000506244 UPF3BQ9BZI7 483 aaKnown RBP19.27■□□□□ 0.68
SNCA-209ENST00000506244 KATNBL1Q9H079 304 aa19.27■□□□□ 0.68
SNCA-209ENST00000506244 SPC25Q9HBM1 224 aa19.27■□□□□ 0.68
SNCA-209ENST00000506244 GCOM1H8Y6P7 765 aaPredicted RBP19.26■□□□□ 0.67
SNCA-209ENST00000506244 hCG_1984214I3L0E3 225 aa19.26■□□□□ 0.67
SNCA-209ENST00000506244 OPLAHO14841 1288 aa19.26■□□□□ 0.67
SNCA-209ENST00000506244 DUSP11O75319 330 aaKnown RBP19.26■□□□□ 0.67
SNCA-209ENST00000506244 POLR2MP0CAP2 368 aa19.26■□□□□ 0.67
SNCA-209ENST00000506244 EDNRBP24530 442 aa19.26■□□□□ 0.67
SNCA-209ENST00000506244 CCDC144BQ3MJ40 725 aa19.26■□□□□ 0.67
SNCA-209ENST00000506244 ANO1Q5XXA6 986 aa19.26■□□□□ 0.67
SNCA-209ENST00000506244 RNF180Q86T96 592 aa19.26■□□□□ 0.67
SNCA-209ENST00000506244 FBXO16Q8IX29 292 aaPredicted RBP19.26■□□□□ 0.67
SNCA-209ENST00000506244 ZNF713Q8N859 430 aaPredicted RBP19.26■□□□□ 0.67
SNCA-209ENST00000506244 DIS3LQ8TF46 1054 aaKnown RBP19.26■□□□□ 0.67
SNCA-209ENST00000506244 CUL5Q93034 780 aa19.26■□□□□ 0.67
SNCA-209ENST00000506244 PURBQ96QR8 312 aaKnown RBP19.26■□□□□ 0.67
SNCA-209ENST00000506244 IWS1Q96ST2 819 aa19.26■□□□□ 0.67
SNCA-209ENST00000506244 RMDN3Q96TC7 470 aa19.26■□□□□ 0.67
SNCA-209ENST00000506244 PDRG1Q9NUG6 133 aa19.26■□□□□ 0.67
SNCA-209ENST00000506244 RBM27Q9P2N5 1060 aaKnown RBP19.26■□□□□ 0.67
SNCA-209ENST00000506244 EVCP57679 992 aa19.25■□□□□ 0.67
SNCA-209ENST00000506244 C8orf34Q49A92 452 aa19.25■□□□□ 0.67
SNCA-209ENST00000506244 ARHGEF16Q5VV41 709 aa19.25■□□□□ 0.67
SNCA-209ENST00000506244 CCDC82Q8N4S0 544 aa19.25■□□□□ 0.67
SNCA-209ENST00000506244 IL17RAQ96F46 866 aa19.25■□□□□ 0.67
SNCA-209ENST00000506244 PDE4DIPQ5VU43 2346 aa19.24■□□□□ 0.67
SNCA-209ENST00000506244 MYCNP04198 464 aaPredicted RBP19.24■□□□□ 0.67
SNCA-209ENST00000506244 TNFAIP2Q03169 654 aa19.24■□□□□ 0.67
SNCA-209ENST00000506244 ANKRD1Q15327 319 aa19.24■□□□□ 0.67
SNCA-209ENST00000506244 PPP1R18Q6NYC8 613 aa19.24■□□□□ 0.67
SNCA-209ENST00000506244 EEPD1Q7L9B9 569 aa19.24■□□□□ 0.67
SNCA-209ENST00000506244 HEATR3Q7Z4Q2 680 aa19.24■□□□□ 0.67
SNCA-209ENST00000506244 TEX2Q8IWB9 1127 aa19.24■□□□□ 0.67
SNCA-209ENST00000506244 SYNRGQ9UMZ2 1314 aa19.24■□□□□ 0.67
SNCA-209ENST00000506244 COL6A1P12109 1028 aa19.23■□□□□ 0.67
SNCA-209ENST00000506244 CDC27P30260 824 aa19.23■□□□□ 0.67
SNCA-209ENST00000506244 MNX1P50219 401 aaPredicted RBP19.23■□□□□ 0.67
SNCA-209ENST00000506244 TOB2Q14106 344 aaPredicted RBP19.23■□□□□ 0.67
SNCA-209ENST00000506244 LRRC41Q15345 812 aa19.23■□□□□ 0.67
SNCA-209ENST00000506244 STXBP2Q15833 593 aa19.23■□□□□ 0.67
SNCA-209ENST00000506244 IQSEC1Q6DN90 963 aa19.23■□□□□ 0.67
SNCA-209ENST00000506244 NOL8Q76FK4 1167 aaKnown RBP19.23■□□□□ 0.67
SNCA-209ENST00000506244 TBC1D5Q92609 795 aa19.23■□□□□ 0.67
SNCA-209ENST00000506244 TAAR1Q96RJ0 339 aa19.23■□□□□ 0.67
SNCA-209ENST00000506244 PXMP2Q9NR77 195 aa19.23■□□□□ 0.67
SNCA-209ENST00000506244 COL20A1Q9P218 1284 aa19.23■□□□□ 0.67
SNCA-209ENST00000506244 MKI67P46013 3256 aaKnown RBP19.23■□□□□ 0.67
SNCA-209ENST00000506244 PDIA3P30101 505 aaKnown RBP19.22■□□□□ 0.67
SNCA-209ENST00000506244 HOXA13P31271 388 aaPredicted RBP19.22■□□□□ 0.67
SNCA-209ENST00000506244 ADCYAP1R1P41586 468 aa19.22■□□□□ 0.67
SNCA-209ENST00000506244 AKAP17AQ02040 695 aaKnown RBP19.22■□□□□ 0.67
SNCA-209ENST00000506244 FUT2Q10981 343 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms