RNA–Protein interactions for RNA: ENST00000505874.1

LINC00616-202, long intergenic non-protein coding RNA 616, humanhuman

TSL 3

Gene LINC00616, Length 260 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00616-202ENST00000505874 TMEFF1Q8IYR6 380 aa6.6□□□□□ -1.35
LINC00616-202ENST00000505874 DACT3Q96B18 629 aaPredicted RBP6.6□□□□□ -1.35
LINC00616-202ENST00000505874 GULP1Q9UBP9 304 aa6.6□□□□□ -1.35
LINC00616-202ENST00000505874 DBR1Q9UK59 544 aaKnown RBP6.6□□□□□ -1.35
LINC00616-202ENST00000505874 EMC9Q9Y3B6 208 aa6.6□□□□□ -1.35
LINC00616-202ENST00000505874 NPHP3-ACAD11A0A0J9YXS1 232 aa6.59□□□□□ -1.35
LINC00616-202ENST00000505874 ZC3H12DA2A288 527 aaKnown RBP6.59□□□□□ -1.35
LINC00616-202ENST00000505874 NOP56O00567 594 aaKnown RBP6.59□□□□□ -1.35
LINC00616-202ENST00000505874 BUB1BO60566 1050 aaPredicted RBP6.59□□□□□ -1.35
LINC00616-202ENST00000505874 NAT2P11245 290 aa6.59□□□□□ -1.35
LINC00616-202ENST00000505874 PAMP19021 973 aa6.59□□□□□ -1.35
LINC00616-202ENST00000505874 PRR5P85299 388 aa6.59□□□□□ -1.35
LINC00616-202ENST00000505874 VMACQ2NL98 169 aa6.59□□□□□ -1.35
LINC00616-202ENST00000505874 CNKSR3Q6P9H4 555 aa6.59□□□□□ -1.35
LINC00616-202ENST00000505874 TTLL10Q6ZVT0 673 aa6.59□□□□□ -1.35
LINC00616-202ENST00000505874 LZTR1Q8N653 840 aa6.59□□□□□ -1.35
LINC00616-202ENST00000505874 BVESQ8NE79 360 aa6.59□□□□□ -1.35
LINC00616-202ENST00000505874 NLGN2Q8NFZ4 835 aa6.59□□□□□ -1.35
LINC00616-202ENST00000505874 ACTR10Q9NZ32 417 aa6.59□□□□□ -1.35
LINC00616-202ENST00000505874 CLEC1BQ9P126 229 aa6.59□□□□□ -1.35
LINC00616-202ENST00000505874 FBLN5Q9UBX5 448 aa6.59□□□□□ -1.35
LINC00616-202ENST00000505874 PLA2G2DQ9UNK4 145 aa6.59□□□□□ -1.35
LINC00616-202ENST00000505874 B2RBV5 119 aa6.58□□□□□ -1.36
LINC00616-202ENST00000505874 ETFBP38117 255 aa6.58□□□□□ -1.36
LINC00616-202ENST00000505874 SCRN1Q12765 414 aa6.58□□□□□ -1.36
LINC00616-202ENST00000505874 GNL2Q13823 731 aaKnown RBP6.58□□□□□ -1.36
LINC00616-202ENST00000505874 POMZP3Q6PJE2 187 aa6.58□□□□□ -1.36
LINC00616-202ENST00000505874 CABP7Q86V35 215 aa6.58□□□□□ -1.36
LINC00616-202ENST00000505874 FAM129CQ86XR2 697 aa6.58□□□□□ -1.36
LINC00616-202ENST00000505874 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.58□□□□□ -1.36
LINC00616-202ENST00000505874 ZCCHC4Q9H5U6 513 aa6.58□□□□□ -1.36
LINC00616-202ENST00000505874 GPRC5CQ9NQ84 441 aa6.58□□□□□ -1.36
LINC00616-202ENST00000505874 TRIM13O60858 407 aa6.57□□□□□ -1.36
LINC00616-202ENST00000505874 PPP1R11O60927 126 aaPredicted RBP6.57□□□□□ -1.36
LINC00616-202ENST00000505874 GLI4P10075 376 aa6.57□□□□□ -1.36
LINC00616-202ENST00000505874 PLS3P13797 630 aa6.57□□□□□ -1.36
LINC00616-202ENST00000505874 LIMS1P48059 325 aa6.57□□□□□ -1.36
LINC00616-202ENST00000505874 RBM25P49756 843 aaKnown RBP6.57□□□□□ -1.36
LINC00616-202ENST00000505874 ZNF143P52747 638 aaPredicted RBP6.57□□□□□ -1.36
LINC00616-202ENST00000505874 TNNI3KQ59H18 835 aa6.57□□□□□ -1.36
LINC00616-202ENST00000505874 GTF2IRD2BQ6EKJ0 949 aa6.57□□□□□ -1.36
LINC00616-202ENST00000505874 GTF2IRD2Q86UP8 949 aa6.57□□□□□ -1.36
LINC00616-202ENST00000505874 FAM178BQ8IXR5 827 aa6.57□□□□□ -1.36
LINC00616-202ENST00000505874 CRACR2BQ8N4Y2 399 aaPredicted RBP6.57□□□□□ -1.36
LINC00616-202ENST00000505874 PWWP2AQ96N64 755 aa6.57□□□□□ -1.36
LINC00616-202ENST00000505874 BCAS3Q9H6U6 928 aa6.57□□□□□ -1.36
LINC00616-202ENST00000505874 TRBV23OR9-2A0A075B6M9 112 aa6.56□□□□□ -1.36
LINC00616-202ENST00000505874 C7orf72A4D263 438 aa6.56□□□□□ -1.36
LINC00616-202ENST00000505874 DDAH1O94760 285 aa6.56□□□□□ -1.36
LINC00616-202ENST00000505874 PFKLP17858 780 aa6.56□□□□□ -1.36
LINC00616-202ENST00000505874 MBLAC2Q68D91 279 aa6.56□□□□□ -1.36
LINC00616-202ENST00000505874 LILRA6Q6PI73 481 aa6.56□□□□□ -1.36
LINC00616-202ENST00000505874 TRIM59Q8IWR1 403 aa6.56□□□□□ -1.36
LINC00616-202ENST00000505874 USP33Q8TEY7 942 aa6.56□□□□□ -1.36
LINC00616-202ENST00000505874 COPS5Q92905 334 aa6.56□□□□□ -1.36
LINC00616-202ENST00000505874 PARD6AQ9NPB6 346 aa6.56□□□□□ -1.36
LINC00616-202ENST00000505874 PRKAG3Q9UGI9 489 aa6.56□□□□□ -1.36
LINC00616-202ENST00000505874 IRS2Q9Y4H2 1338 aa6.55□□□□□ -1.36
LINC00616-202ENST00000505874 TBX1O43435 398 aa6.55□□□□□ -1.36
LINC00616-202ENST00000505874 NPHS1O60500 1241 aa6.55□□□□□ -1.36
LINC00616-202ENST00000505874 HOXA5P20719 270 aa6.55□□□□□ -1.36
LINC00616-202ENST00000505874 IGFBP6P24592 240 aaPredicted RBP6.55□□□□□ -1.36
LINC00616-202ENST00000505874 TARBP2Q15633 366 aaKnown RBP6.55□□□□□ -1.36
LINC00616-202ENST00000505874 SV2CQ496J9 727 aa6.55□□□□□ -1.36
LINC00616-202ENST00000505874 MICAL1Q8TDZ2 1067 aa6.55□□□□□ -1.36
LINC00616-202ENST00000505874 BTN2A2Q8WVV5 523 aa6.55□□□□□ -1.36
LINC00616-202ENST00000505874 MRGPRX3Q96LB0 322 aa6.55□□□□□ -1.36
LINC00616-202ENST00000505874 TINF2Q9BSI4 451 aa6.55□□□□□ -1.36
LINC00616-202ENST00000505874 MTA3Q9BTC8 594 aa6.55□□□□□ -1.36
LINC00616-202ENST00000505874 BTG4Q9NY30 223 aa6.55□□□□□ -1.36
LINC00616-202ENST00000505874 LRP2BPQ9P2M1 347 aa6.55□□□□□ -1.36
LINC00616-202ENST00000505874 FUCA1P04066 466 aa6.54□□□□□ -1.36
LINC00616-202ENST00000505874 THBDP07204 575 aa6.54□□□□□ -1.36
LINC00616-202ENST00000505874 ATF2P15336 505 aa6.54□□□□□ -1.36
LINC00616-202ENST00000505874 FBLN1P23142 703 aa6.54□□□□□ -1.36
LINC00616-202ENST00000505874 MC3RP41968 323 aa6.54□□□□□ -1.36
LINC00616-202ENST00000505874 ARID5AQ03989 594 aa6.54□□□□□ -1.36
LINC00616-202ENST00000505874 MARCH10Q8NA82 808 aaPredicted RBP6.54□□□□□ -1.36
LINC00616-202ENST00000505874 ALG3Q92685 438 aa6.54□□□□□ -1.36
LINC00616-202ENST00000505874 KCNC2Q96PR1 638 aa6.54□□□□□ -1.36
LINC00616-202ENST00000505874 NKX2-4Q9H2Z4 354 aa6.54□□□□□ -1.36
LINC00616-202ENST00000505874 ZNF408Q9H9D4 720 aa6.54□□□□□ -1.36
LINC00616-202ENST00000505874 CYP26B1Q9NR63 512 aa6.54□□□□□ -1.36
LINC00616-202ENST00000505874 FAN1Q9Y2M0 1017 aa6.54□□□□□ -1.36
LINC00616-202ENST00000505874 KRTAP9-7A8MTY7 169 aa6.53□□□□□ -1.36
LINC00616-202ENST00000505874 SUSD5O60279 629 aa6.53□□□□□ -1.36
LINC00616-202ENST00000505874 ITGAVP06756 1048 aa6.53□□□□□ -1.36
LINC00616-202ENST00000505874 ASGR2P07307 311 aa6.53□□□□□ -1.36
LINC00616-202ENST00000505874 FGRP09769 529 aa6.53□□□□□ -1.36
LINC00616-202ENST00000505874 DNAJA1P31689 397 aaKnown RBP6.53□□□□□ -1.36
LINC00616-202ENST00000505874 CTSWP56202 376 aa6.53□□□□□ -1.36
LINC00616-202ENST00000505874 FXNQ16595 210 aa6.53□□□□□ -1.36
LINC00616-202ENST00000505874 WWC2Q6AWC2 1192 aa6.53□□□□□ -1.36
LINC00616-202ENST00000505874 MRM1Q6IN84 353 aaKnown RBP6.53□□□□□ -1.36
LINC00616-202ENST00000505874 PEX11GQ96HA9 241 aa6.53□□□□□ -1.36
LINC00616-202ENST00000505874 MARCH2Q9P0N8 246 aa6.53□□□□□ -1.36
LINC00616-202ENST00000505874 NUDT5Q9UKK9 219 aa6.53□□□□□ -1.36
LINC00616-202ENST00000505874 NTRK1P04629 796 aa6.52□□□□□ -1.37
LINC00616-202ENST00000505874 SNRPB2P08579 225 aaKnown RBP6.52□□□□□ -1.37
LINC00616-202ENST00000505874 PMLP29590 882 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms