RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 SMC2O95347 1197 aa9.12□□□□□ -0.95
COL4A5-208ENST00000505728 EGFRP00533 1210 aa9.12□□□□□ -0.95
COL4A5-208ENST00000505728 GCFC2P16383 781 aaKnown RBP9.12□□□□□ -0.95
COL4A5-208ENST00000505728 SARSP49591 514 aaKnown RBP9.12□□□□□ -0.95
COL4A5-208ENST00000505728 USP11P51784 963 aa9.12□□□□□ -0.95
COL4A5-208ENST00000505728 POSTNQ15063 836 aa9.12□□□□□ -0.95
COL4A5-208ENST00000505728 IL17AQ16552 155 aa9.12□□□□□ -0.95
COL4A5-208ENST00000505728 LETM2Q2VYF4 491 aa9.12□□□□□ -0.95
COL4A5-208ENST00000505728 CT47A1Q5JQC4 288 aaPredicted RBP9.12□□□□□ -0.95
COL4A5-208ENST00000505728 NT5DC1Q5TFE4 455 aa9.12□□□□□ -0.95
COL4A5-208ENST00000505728 PPP4R3AQ6IN85 833 aa9.12□□□□□ -0.95
COL4A5-208ENST00000505728 C11orf57Q6ZUT1 292 aaPredicted RBP9.12□□□□□ -0.95
COL4A5-208ENST00000505728 USP49Q70CQ1 688 aa9.12□□□□□ -0.95
COL4A5-208ENST00000505728 CDAN1Q8IWY9 1227 aa9.12□□□□□ -0.95
COL4A5-208ENST00000505728 TRIML1Q8N9V2 468 aa9.12□□□□□ -0.95
COL4A5-208ENST00000505728 DHX58Q96C10 678 aa9.12□□□□□ -0.95
COL4A5-208ENST00000505728 ABHD8Q96I13 439 aa9.12□□□□□ -0.95
COL4A5-208ENST00000505728 EPSTI1Q96J88 318 aa9.12□□□□□ -0.95
COL4A5-208ENST00000505728 NUP88Q99567 741 aaPredicted RBP9.12□□□□□ -0.95
COL4A5-208ENST00000505728 TMEM60Q9H2L4 133 aa9.12□□□□□ -0.95
COL4A5-208ENST00000505728 TMEM260Q9NX78 707 aa9.12□□□□□ -0.95
COL4A5-208ENST00000505728 TSKSQ9UJT2 592 aa9.12□□□□□ -0.95
COL4A5-208ENST00000505728 PCDHA5Q9Y5H7 936 aa9.12□□□□□ -0.95
COL4A5-208ENST00000505728 SMCHD1A6NHR9 2005 aa9.11□□□□□ -0.95
COL4A5-208ENST00000505728 ATAD5Q96QE3 1844 aa9.11□□□□□ -0.95
COL4A5-208ENST00000505728 BECN2A8MW95 431 aa9.11□□□□□ -0.95
COL4A5-208ENST00000505728 WDR46O15213 610 aaKnown RBP9.11□□□□□ -0.95
COL4A5-208ENST00000505728 NEMFO60524 1076 aa9.11□□□□□ -0.95
COL4A5-208ENST00000505728 ADCY5O95622 1261 aa9.11□□□□□ -0.95
COL4A5-208ENST00000505728 USP14P54578 494 aa9.11□□□□□ -0.95
COL4A5-208ENST00000505728 PNOCQ13519 176 aa9.11□□□□□ -0.95
COL4A5-208ENST00000505728 KIAA1755Q5JYT7 1200 aa9.11□□□□□ -0.95
COL4A5-208ENST00000505728 FAM83BQ5T0W9 1011 aa9.11□□□□□ -0.95
COL4A5-208ENST00000505728 NBPF12Q5TAG4 269 aaPredicted RBP9.11□□□□□ -0.95
COL4A5-208ENST00000505728 MOXD1Q6UVY6 613 aa9.11□□□□□ -0.95
COL4A5-208ENST00000505728 LUZP1Q86V48 1076 aa9.11□□□□□ -0.95
COL4A5-208ENST00000505728 PDILTQ8N807 584 aa9.11□□□□□ -0.95
COL4A5-208ENST00000505728 SPATA20Q8TB22 786 aa9.11□□□□□ -0.95
COL4A5-208ENST00000505728 ZC3H15Q8WU90 426 aaKnown RBP9.11□□□□□ -0.95
COL4A5-208ENST00000505728 LPAR1Q92633 364 aa9.11□□□□□ -0.95
COL4A5-208ENST00000505728 ERCC4Q92889 916 aaPredicted RBP9.11□□□□□ -0.95
COL4A5-208ENST00000505728 SMARCE1Q969G3 411 aa9.11□□□□□ -0.95
COL4A5-208ENST00000505728 PAGE5Q96GU1 130 aa9.11□□□□□ -0.95
COL4A5-208ENST00000505728 MTMR9Q96QG7 549 aa9.11□□□□□ -0.95
COL4A5-208ENST00000505728 WDR18Q9BV38 432 aa9.11□□□□□ -0.95
COL4A5-208ENST00000505728 KIAA1683Q9H0B3 1180 aa9.11□□□□□ -0.95
COL4A5-208ENST00000505728 RANBP17Q9H2T7 1088 aaKnown RBP9.11□□□□□ -0.95
COL4A5-208ENST00000505728 ZNF408Q9H9D4 720 aa9.11□□□□□ -0.95
COL4A5-208ENST00000505728 CCDC39Q9UFE4 941 aa9.11□□□□□ -0.95
COL4A5-208ENST00000505728 DACH1Q9UI36 760 aa9.11□□□□□ -0.95
COL4A5-208ENST00000505728 PNMA2Q9UL42 364 aa9.11□□□□□ -0.95
COL4A5-208ENST00000505728 PITPNM2Q9BZ72 1349 aa9.1□□□□□ -0.95
COL4A5-208ENST00000505728 CYP3A7-CYP3A51PA0A087WV96 503 aa9.1□□□□□ -0.95
COL4A5-208ENST00000505728 A0A087X0B3 334 aa9.1□□□□□ -0.95
COL4A5-208ENST00000505728 PIK3CDO00329 1044 aa9.1□□□□□ -0.95
COL4A5-208ENST00000505728 MEIS2O14770 477 aa9.1□□□□□ -0.95
COL4A5-208ENST00000505728 IKBKBO14920 756 aa9.1□□□□□ -0.95
COL4A5-208ENST00000505728 SLC26A4O43511 780 aa9.1□□□□□ -0.95
COL4A5-208ENST00000505728 GTPBP6O43824 516 aaPredicted RBP9.1□□□□□ -0.95
COL4A5-208ENST00000505728 EDIL3O43854 480 aa9.1□□□□□ -0.95
COL4A5-208ENST00000505728 MYL1P05976 194 aa9.1□□□□□ -0.95
COL4A5-208ENST00000505728 FDX1P10109 184 aa9.1□□□□□ -0.95
COL4A5-208ENST00000505728 CYP3A7P24462 503 aa9.1□□□□□ -0.95
COL4A5-208ENST00000505728 MAP2K2P36507 400 aa9.1□□□□□ -0.95
COL4A5-208ENST00000505728 UBA7P41226 1012 aa9.1□□□□□ -0.95
COL4A5-208ENST00000505728 FXR2P51116 673 aaKnown RBP eCLIP9.1□□□□□ -0.95
COL4A5-208ENST00000505728 TPM4P67936 248 aa9.1□□□□□ -0.95
COL4A5-208ENST00000505728 SEMA3FQ13275 785 aa9.1□□□□□ -0.95
COL4A5-208ENST00000505728 MORC3Q14149 939 aa9.1□□□□□ -0.95
COL4A5-208ENST00000505728 PDIA5Q14554 519 aa9.1□□□□□ -0.95
COL4A5-208ENST00000505728 E2F4Q16254 413 aa9.1□□□□□ -0.95
COL4A5-208ENST00000505728 CALCRLQ16602 461 aa9.1□□□□□ -0.95
COL4A5-208ENST00000505728 UBE2SQ16763 222 aa9.1□□□□□ -0.95
COL4A5-208ENST00000505728 TMEM266Q2M3C6 531 aa9.1□□□□□ -0.95
COL4A5-208ENST00000505728 SUPT20HL1Q3ZLR7 823 aa9.1□□□□□ -0.95
COL4A5-208ENST00000505728 ANGEL2Q5VTE6 544 aaKnown RBP9.1□□□□□ -0.95
COL4A5-208ENST00000505728 SARM1Q6SZW1 724 aa9.1□□□□□ -0.95
COL4A5-208ENST00000505728 SCYL3Q8IZE3 742 aa9.1□□□□□ -0.95
COL4A5-208ENST00000505728 SPICE1Q8N0Z3 855 aa9.1□□□□□ -0.95
COL4A5-208ENST00000505728 MLKLQ8NB16 471 aa9.1□□□□□ -0.95
COL4A5-208ENST00000505728 GSDMAQ96QA5 445 aa9.1□□□□□ -0.95
COL4A5-208ENST00000505728 ZIC5Q96T25 663 aa9.1□□□□□ -0.95
COL4A5-208ENST00000505728 FEZ1Q99689 392 aa9.1□□□□□ -0.95
COL4A5-208ENST00000505728 ANO3Q9BYT9 981 aa9.1□□□□□ -0.95
COL4A5-208ENST00000505728 RAB34Q9BZG1 259 aa9.1□□□□□ -0.95
COL4A5-208ENST00000505728 CUEDC2Q9H467 287 aa9.1□□□□□ -0.95
COL4A5-208ENST00000505728 MAGEF1Q9HAY2 307 aa9.1□□□□□ -0.95
COL4A5-208ENST00000505728 AS3MTQ9HBK9 375 aa9.1□□□□□ -0.95
COL4A5-208ENST00000505728 MAN1B1Q9UKM7 699 aa9.1□□□□□ -0.95
COL4A5-208ENST00000505728 MRPL11Q9Y3B7 192 aaKnown RBP9.1□□□□□ -0.95
COL4A5-208ENST00000505728 ASTN2O75129 1339 aaPredicted RBP9.09□□□□□ -0.95
COL4A5-208ENST00000505728 ABCB11O95342 1321 aa9.09□□□□□ -0.95
COL4A5-208ENST00000505728 USP17L15C9J2P7 530 aa9.09□□□□□ -0.95
COL4A5-208ENST00000505728 USP17L13C9JLJ4 530 aa9.09□□□□□ -0.95
COL4A5-208ENST00000505728 USP17L11C9JVI0 530 aa9.09□□□□□ -0.95
COL4A5-208ENST00000505728 USP17L18D6R9N7 530 aa9.09□□□□□ -0.95
COL4A5-208ENST00000505728 USP17L22D6RA61 530 aa9.09□□□□□ -0.95
COL4A5-208ENST00000505728 USP17L17D6RBQ6 530 aa9.09□□□□□ -0.95
COL4A5-208ENST00000505728 USP17L19D6RCP7 530 aa9.09□□□□□ -0.95
COL4A5-208ENST00000505728 USP17L20D6RJB6 530 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms