RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 SLF1Q9BQI6 1058 aa10.71□□□□□ -0.69
TPM3-218ENST00000505010 FTOQ9C0B1 505 aaKnown RBP eCLIP10.71□□□□□ -0.697e-6■■□□□ 12.9
TPM3-218ENST00000505010 SCAND2PQ9GZW5 306 aaPredicted RBP10.71□□□□□ -0.69
TPM3-218ENST00000505010 RPAP3Q9H6T3 665 aaPredicted RBP10.71□□□□□ -0.69
TPM3-218ENST00000505010 C6orf50Q9HD87 102 aa10.71□□□□□ -0.69
TPM3-218ENST00000505010 FBXO28Q9NVF7 368 aa10.71□□□□□ -0.69
TPM3-218ENST00000505010 CPA4Q9UI42 421 aa10.71□□□□□ -0.69
TPM3-218ENST00000505010 CFAP45Q9UL16 551 aa10.71□□□□□ -0.69
TPM3-218ENST00000505010 STXBP5LQ9Y2K9 1186 aa10.71□□□□□ -0.69
TPM3-218ENST00000505010 SMCHD1A6NHR9 2005 aa10.7□□□□□ -0.7
TPM3-218ENST00000505010 MYPNQ86TC9 1320 aa10.7□□□□□ -0.7
TPM3-218ENST00000505010 ESYT2A0FGR8 921 aa10.7□□□□□ -0.7
TPM3-218ENST00000505010 FAM205CA6NFA0 338 aa10.7□□□□□ -0.7
TPM3-218ENST00000505010 SMCO2A6NFE2 343 aa10.7□□□□□ -0.7
TPM3-218ENST00000505010 C19orf81C9J6K1 198 aa10.7□□□□□ -0.7
TPM3-218ENST00000505010 PLA2G6O60733 806 aa10.7□□□□□ -0.7
TPM3-218ENST00000505010 SGPL1O95470 568 aa10.7□□□□□ -0.7
TPM3-218ENST00000505010 CTGFP29279 349 aa10.7□□□□□ -0.7
TPM3-218ENST00000505010 GNA11P29992 359 aa10.7□□□□□ -0.7
TPM3-218ENST00000505010 USH1GQ495M9 461 aa10.7□□□□□ -0.7
TPM3-218ENST00000505010 ATL3Q6DD88 541 aa10.7□□□□□ -0.7
TPM3-218ENST00000505010 FBXO11Q86XK2 927 aa10.7□□□□□ -0.7
TPM3-218ENST00000505010 RASGRP4Q8TDF6 673 aa10.7□□□□□ -0.7
TPM3-218ENST00000505010 LEO1Q8WVC0 666 aaPredicted RBP10.7□□□□□ -0.7
TPM3-218ENST00000505010 C12orf42Q96LP6 360 aa10.7□□□□□ -0.7
TPM3-218ENST00000505010 AMNQ9BXJ7 453 aa10.7□□□□□ -0.7
TPM3-218ENST00000505010 COL25A1Q9BXS0 654 aaPredicted RBP10.7□□□□□ -0.7
TPM3-218ENST00000505010 ZMYND12Q9H0C1 365 aa10.7□□□□□ -0.7
TPM3-218ENST00000505010 RANBP17Q9H2T7 1088 aaKnown RBP10.7□□□□□ -0.7
TPM3-218ENST00000505010 LMBRD1Q9NUN5 540 aa10.7□□□□□ -0.7
TPM3-218ENST00000505010 NOL7Q9UMY1 257 aaKnown RBP10.7□□□□□ -0.7
TPM3-218ENST00000505010 AFG3L2Q9Y4W6 797 aa10.7□□□□□ -0.7
TPM3-218ENST00000505010 MYH7BA7E2Y1 1941 aa10.7□□□□□ -0.7
TPM3-218ENST00000505010 ELP1O95163 1332 aa10.69□□□□□ -0.7
TPM3-218ENST00000505010 CCDC194A0A1B0GVG4 234 aa10.69□□□□□ -0.7
TPM3-218ENST00000505010 ADAMTS3O15072 1205 aa10.69□□□□□ -0.7
TPM3-218ENST00000505010 FLOT1O75955 427 aa10.69□□□□□ -0.7
TPM3-218ENST00000505010 TFRCP02786 760 aaKnown RBP10.69□□□□□ -0.7
TPM3-218ENST00000505010 TAL1P17542 331 aaPredicted RBP10.69□□□□□ -0.7
TPM3-218ENST00000505010 CAPN2P17655 700 aa10.69□□□□□ -0.7
TPM3-218ENST00000505010 ATP2B1P20020 1258 aa10.69□□□□□ -0.7
TPM3-218ENST00000505010 PPATQ06203 517 aa10.69□□□□□ -0.7
TPM3-218ENST00000505010 STK38Q15208 465 aa10.69□□□□□ -0.7
TPM3-218ENST00000505010 ANO1Q5XXA6 986 aa10.69□□□□□ -0.7
TPM3-218ENST00000505010 PIK3AP1Q6ZUJ8 805 aa10.69□□□□□ -0.7
TPM3-218ENST00000505010 REXO1Q8N1G1 1221 aaKnown RBP10.69□□□□□ -0.7
TPM3-218ENST00000505010 SLAIN1Q8ND83 568 aa10.69□□□□□ -0.7
TPM3-218ENST00000505010 BICD2Q8TD16 824 aa10.69□□□□□ -0.7
TPM3-218ENST00000505010 CUL5Q93034 780 aa10.69□□□□□ -0.7
TPM3-218ENST00000505010 TNFRSF25Q93038 417 aa10.69□□□□□ -0.7
TPM3-218ENST00000505010 CTDP1Q9Y5B0 961 aaPredicted RBP10.69□□□□□ -0.7
TPM3-218ENST00000505010 PCDHA1Q9Y5I3 950 aa10.69□□□□□ -0.7
TPM3-218ENST00000505010 CLIC4Q9Y696 253 aa10.69□□□□□ -0.7
TPM3-218ENST00000505010 ZSWIM8A7E2V4 1837 aa10.68□□□□□ -0.7
TPM3-218ENST00000505010 PDHXO00330 501 aa10.68□□□□□ -0.7
TPM3-218ENST00000505010 GADD45BO75293 160 aaPredicted RBP10.68□□□□□ -0.7
TPM3-218ENST00000505010 BMP8BP34820 402 aa10.68□□□□□ -0.7
TPM3-218ENST00000505010 TRAF1Q13077 416 aa10.68□□□□□ -0.7
TPM3-218ENST00000505010 PPIL2Q13356 520 aa10.68□□□□□ -0.7
TPM3-218ENST00000505010 SF3A1Q15459 793 aaKnown RBP10.68□□□□□ -0.7
TPM3-218ENST00000505010 RILPL1Q5EBL4 403 aa10.68□□□□□ -0.7
TPM3-218ENST00000505010 EARS2Q5JPH6 523 aaKnown RBP10.68□□□□□ -0.7
TPM3-218ENST00000505010 GADL1Q6ZQY3 521 aa10.68□□□□□ -0.7
TPM3-218ENST00000505010 Q7L0L9 218 aa10.68□□□□□ -0.7
TPM3-218ENST00000505010 KRT25Q7Z3Z0 450 aa10.68□□□□□ -0.7
TPM3-218ENST00000505010 PRPF38AQ8NAV1 312 aaKnown RBP10.68□□□□□ -0.7
TPM3-218ENST00000505010 UNC93B1Q9H1C4 597 aa10.68□□□□□ -0.7
TPM3-218ENST00000505010 RIC8AQ9NPQ8 531 aa10.68□□□□□ -0.7
TPM3-218ENST00000505010 POLR3EQ9NVU0 708 aa10.68□□□□□ -0.7
TPM3-218ENST00000505010 TMEM260Q9NX78 707 aa10.68□□□□□ -0.7
TPM3-218ENST00000505010 RTEL1Q9NZ71 1219 aa10.68□□□□□ -0.7
TPM3-218ENST00000505010 PPP1R9AQ9ULJ8 1098 aa10.68□□□□□ -0.7
TPM3-218ENST00000505010 PCDHA6Q9UN73 950 aa10.68□□□□□ -0.7
TPM3-218ENST00000505010 PCDHA8Q9Y5H6 950 aa10.68□□□□□ -0.7
TPM3-218ENST00000505010 A0A0G2JLL6 359 aaPredicted RBP10.67□□□□□ -0.7
TPM3-218ENST00000505010 GOLGA6L4A6NEF3 574 aa10.67□□□□□ -0.7
TPM3-218ENST00000505010 TRAK2O60296 914 aa10.67□□□□□ -0.7
TPM3-218ENST00000505010 YEATS4O95619 227 aa10.67□□□□□ -0.7
TPM3-218ENST00000505010 MBD3O95983 291 aa10.67□□□□□ -0.7
TPM3-218ENST00000505010 ME1P48163 572 aa10.67□□□□□ -0.7
TPM3-218ENST00000505010 NASPP49321 788 aaPredicted RBP10.67□□□□□ -0.7
TPM3-218ENST00000505010 TOB1P50616 345 aaPredicted RBP10.67□□□□□ -0.7
TPM3-218ENST00000505010 MRPL12P52815 198 aaKnown RBP10.67□□□□□ -0.7
TPM3-218ENST00000505010 FCGRTP55899 365 aa10.67□□□□□ -0.7
TPM3-218ENST00000505010 PRKCZQ05513 592 aa10.67□□□□□ -0.7
TPM3-218ENST00000505010 UBE2SQ16763 222 aa10.67□□□□□ -0.7
TPM3-218ENST00000505010 SKOR2Q2VWA4 1001 aaPredicted RBP10.67□□□□□ -0.7
TPM3-218ENST00000505010 SH3D19Q5HYK7 790 aa10.67□□□□□ -0.7
TPM3-218ENST00000505010 TTC38Q5R3I4 469 aa10.67□□□□□ -0.7
TPM3-218ENST00000505010 JAKMIP3Q5VZ66 844 aa10.67□□□□□ -0.7
TPM3-218ENST00000505010 PRRT2Q7Z6L0 340 aaPredicted RBP10.67□□□□□ -0.7
TPM3-218ENST00000505010 ANKRD23Q86SG2 305 aa10.67□□□□□ -0.7
TPM3-218ENST00000505010 GDF15Q99988 308 aa10.67□□□□□ -0.7
TPM3-218ENST00000505010 GLT8D2Q9H1C3 349 aa10.67□□□□□ -0.7
TPM3-218ENST00000505010 PSTPIP2Q9H939 334 aa10.67□□□□□ -0.7
TPM3-218ENST00000505010 MTMR10Q9NXD2 777 aa10.67□□□□□ -0.7
TPM3-218ENST00000505010 CCPG1Q9ULG6 757 aa10.67□□□□□ -0.7
TPM3-218ENST00000505010 DDX49Q9Y6V7 483 aaKnown RBP10.67□□□□□ -0.7
TPM3-218ENST00000505010 ABCB11O95342 1321 aa10.66□□□□□ -0.7
TPM3-218ENST00000505010 USP17L15C9J2P7 530 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms