RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 SEPT9Q9UHD8 586 aaPredicted RBP7.26□□□□□ -1.25
GYPB-204ENST00000504951 ASTN1O14525 1302 aa7.26□□□□□ -1.25
GYPB-204ENST00000504951 UMODL1Q5DID0 1318 aa7.26□□□□□ -1.25
GYPB-204ENST00000504951 PNMA6EA0A0J9YXQ4 647 aa7.25□□□□□ -1.25
GYPB-204ENST00000504951 FAM86C2PA6NEL3 165 aa7.25□□□□□ -1.25
GYPB-204ENST00000504951 ASB14A6NK59 587 aa7.25□□□□□ -1.25
GYPB-204ENST00000504951 RFXAPO00287 272 aa7.25□□□□□ -1.25
GYPB-204ENST00000504951 DCXO43602 365 aa7.25□□□□□ -1.25
GYPB-204ENST00000504951 CCL23P55773 120 aa7.25□□□□□ -1.25
GYPB-204ENST00000504951 ERVK-21P61565 698 aa7.25□□□□□ -1.25
GYPB-204ENST00000504951 TNFAIP2Q03169 654 aa7.25□□□□□ -1.25
GYPB-204ENST00000504951 PTPN11Q06124 597 aaPredicted RBP7.25□□□□□ -1.25
GYPB-204ENST00000504951 TTLL4Q14679 1199 aa7.25□□□□□ -1.25
GYPB-204ENST00000504951 FSCN1Q16658 493 aaKnown RBP7.25□□□□□ -1.25
GYPB-204ENST00000504951 LRRFIP1Q32MZ4 808 aaKnown RBP7.25□□□□□ -1.25
GYPB-204ENST00000504951 ARMCX2Q7L311 632 aa7.25□□□□□ -1.25
GYPB-204ENST00000504951 PACS2Q86VP3 889 aa7.25□□□□□ -1.25
GYPB-204ENST00000504951 MICALL1Q8N3F8 863 aa7.25□□□□□ -1.25
GYPB-204ENST00000504951 FAM133AQ8N9E0 248 aa7.25□□□□□ -1.25
GYPB-204ENST00000504951 MIGA1Q8NAN2 632 aa7.25□□□□□ -1.25
GYPB-204ENST00000504951 MORC4Q8TE76 937 aa7.25□□□□□ -1.25
GYPB-204ENST00000504951 MKL1Q969V6 931 aa7.25□□□□□ -1.25
GYPB-204ENST00000504951 UPF3BQ9BZI7 483 aaKnown RBP7.25□□□□□ -1.25
GYPB-204ENST00000504951 UBE2ZQ9H832 354 aaPredicted RBP7.25□□□□□ -1.25
GYPB-204ENST00000504951 FBXO28Q9NVF7 368 aa7.25□□□□□ -1.25
GYPB-204ENST00000504951 MCM9Q9NXL9 1143 aa7.25□□□□□ -1.25
GYPB-204ENST00000504951 ZHX1Q9UKY1 873 aaPredicted RBP7.25□□□□□ -1.25
GYPB-204ENST00000504951 MAGEB6P1A0A0J9YX57 407 aa7.24□□□□□ -1.25
GYPB-204ENST00000504951 MPHOSPH10O00566 681 aaKnown RBP7.24□□□□□ -1.25
GYPB-204ENST00000504951 DPYSL4O14531 572 aa7.24□□□□□ -1.25
GYPB-204ENST00000504951 BCAR3O75815 825 aa7.24□□□□□ -1.25
GYPB-204ENST00000504951 IDH1O75874 414 aaKnown RBP7.24□□□□□ -1.25
GYPB-204ENST00000504951 IQCF3P0C7M6 154 aa7.24□□□□□ -1.25
GYPB-204ENST00000504951 EEF2P13639 858 aaKnown RBP7.24□□□□□ -1.25
GYPB-204ENST00000504951 TRIM27P14373 513 aa7.24□□□□□ -1.25
GYPB-204ENST00000504951 AKR1B1P15121 316 aa7.24□□□□□ -1.25
GYPB-204ENST00000504951 ATP8B2P98198 1209 aa7.24□□□□□ -1.25
GYPB-204ENST00000504951 TTF1Q15361 905 aaPredicted RBP7.24□□□□□ -1.25
GYPB-204ENST00000504951 CSPP1Q1MSJ5 1256 aa7.24□□□□□ -1.25
GYPB-204ENST00000504951 C12orf60Q5U649 245 aa7.24□□□□□ -1.25
GYPB-204ENST00000504951 SNRNP48Q6IEG0 339 aaKnown RBP7.24□□□□□ -1.25
GYPB-204ENST00000504951 CXCL17Q6UXB2 119 aa7.24□□□□□ -1.25
GYPB-204ENST00000504951 C16orf86Q6ZW13 317 aa7.24□□□□□ -1.25
GYPB-204ENST00000504951 RPAP2Q8IXW5 612 aaPredicted RBP7.24□□□□□ -1.25
GYPB-204ENST00000504951 CCDC144CPQ8IYA2 1237 aa7.24□□□□□ -1.25
GYPB-204ENST00000504951 SPICE1Q8N0Z3 855 aa7.24□□□□□ -1.25
GYPB-204ENST00000504951 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.24□□□□□ -1.25
GYPB-204ENST00000504951 ARNTL2Q8WYA1 636 aa7.24□□□□□ -1.25
GYPB-204ENST00000504951 SLF1Q9BQI6 1058 aa7.24□□□□□ -1.25
GYPB-204ENST00000504951 AP5M1Q9H0R1 490 aa7.24□□□□□ -1.25
GYPB-204ENST00000504951 IRF2BPLQ9H1B7 796 aa7.24□□□□□ -1.25
GYPB-204ENST00000504951 TRPV6Q9H1D0 765 aa7.24□□□□□ -1.25
GYPB-204ENST00000504951 SLC38A10Q9HBR0 1119 aa7.24□□□□□ -1.25
GYPB-204ENST00000504951 POLR3EQ9NVU0 708 aa7.24□□□□□ -1.25
GYPB-204ENST00000504951 NYAP2Q9P242 653 aa7.24□□□□□ -1.25
GYPB-204ENST00000504951 CTNNA3Q9UI47 895 aa7.24□□□□□ -1.25
GYPB-204ENST00000504951 DBNLQ9UJU6 430 aaKnown RBP7.24□□□□□ -1.25
GYPB-204ENST00000504951 FAM50BQ9Y247 325 aa7.24□□□□□ -1.25
GYPB-204ENST00000504951 RIPK3Q9Y572 518 aa7.24□□□□□ -1.25
GYPB-204ENST00000504951 COL11A1P12107 1806 aaPredicted RBP7.24□□□□□ -1.25
GYPB-204ENST00000504951 RBM47A0AV96 593 aaKnown RBP7.23□□□□□ -1.25
GYPB-204ENST00000504951 ZBBXA8MT70 800 aa7.23□□□□□ -1.25
GYPB-204ENST00000504951 USP17L12C9JPN9 530 aa7.23□□□□□ -1.25
GYPB-204ENST00000504951 USP17L21D6R901 530 aa7.23□□□□□ -1.25
GYPB-204ENST00000504951 NCK2O43639 380 aa7.23□□□□□ -1.25
GYPB-204ENST00000504951 KPNA6O60684 536 aa7.23□□□□□ -1.25
GYPB-204ENST00000504951 EFCAB14O75071 495 aa7.23□□□□□ -1.25
GYPB-204ENST00000504951 ZBED4O75132 1171 aa7.23□□□□□ -1.25
GYPB-204ENST00000504951 CDK8P49336 464 aa7.23□□□□□ -1.25
GYPB-204ENST00000504951 RBL2Q08999 1139 aa7.23□□□□□ -1.25
GYPB-204ENST00000504951 TKFCQ3LXA3 575 aa7.23□□□□□ -1.25
GYPB-204ENST00000504951 HERC4Q5GLZ8 1057 aaPredicted RBP7.23□□□□□ -1.25
GYPB-204ENST00000504951 KRT40Q6A162 431 aa7.23□□□□□ -1.25
GYPB-204ENST00000504951 TAPT1Q6NXT6 567 aa7.23□□□□□ -1.25
GYPB-204ENST00000504951 NFRKBQ6P4R8 1299 aa7.23□□□□□ -1.25
GYPB-204ENST00000504951 TLK2Q86UE8 772 aa7.23□□□□□ -1.25
GYPB-204ENST00000504951 CLUAP1Q96AJ1 413 aa7.23□□□□□ -1.25
GYPB-204ENST00000504951 RAD9AQ99638 391 aa7.23□□□□□ -1.25
GYPB-204ENST00000504951 SUGCTQ9HAC7 445 aa7.23□□□□□ -1.25
GYPB-204ENST00000504951 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.22□□□□□ -1.25
GYPB-204ENST00000504951 ABHD14A-ACY1A0A1B0GW23 586 aa7.22□□□□□ -1.25
GYPB-204ENST00000504951 TCRBV5S4A2TA0A5A2 114 aa7.22□□□□□ -1.25
GYPB-204ENST00000504951 F5H6K3 240 aa7.22□□□□□ -1.25
GYPB-204ENST00000504951 PLA2G6O60733 806 aa7.22□□□□□ -1.25
GYPB-204ENST00000504951 ARHGEF15O94989 841 aa7.22□□□□□ -1.25
GYPB-204ENST00000504951 GJB5O95377 273 aa7.22□□□□□ -1.25
GYPB-204ENST00000504951 CXCL10P02778 98 aa7.22□□□□□ -1.25
GYPB-204ENST00000504951 SMPD1P17405 629 aa7.22□□□□□ -1.25
GYPB-204ENST00000504951 BEX3Q00994 111 aa7.22□□□□□ -1.25
GYPB-204ENST00000504951 KLRC3Q07444 240 aa7.22□□□□□ -1.25
GYPB-204ENST00000504951 BFSP2Q13515 415 aa7.22□□□□□ -1.25
GYPB-204ENST00000504951 DUSP28Q4G0W2 176 aa7.22□□□□□ -1.25
GYPB-204ENST00000504951 PTCRAQ6ISU1 281 aaPredicted RBP7.22□□□□□ -1.25
GYPB-204ENST00000504951 ADHFE1Q8IWW8 467 aa7.22□□□□□ -1.25
GYPB-204ENST00000504951 ANKRD35Q8N283 1001 aa7.22□□□□□ -1.25
GYPB-204ENST00000504951 CAGE1Q8TC20 777 aa7.22□□□□□ -1.25
GYPB-204ENST00000504951 EAF2Q96CJ1 260 aaPredicted RBP7.22□□□□□ -1.25
GYPB-204ENST00000504951 SCLYQ96I15 445 aa7.22□□□□□ -1.25
GYPB-204ENST00000504951 SAMD11Q96NU1 681 aa7.22□□□□□ -1.25
GYPB-204ENST00000504951 TGS1Q96RS0 853 aaKnown RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms