RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 MAGEF1Q9HAY2 307 aa15.06■□□□□ 0
LMNA-220ENST00000504687 PICK1Q9NRD5 415 aa15.06■□□□□ 0
LMNA-220ENST00000504687 TBX3O15119 743 aa15.05■□□□□ -0
LMNA-220ENST00000504687 ICAM1P05362 532 aa15.05■□□□□ -0
LMNA-220ENST00000504687 IQCB1Q15051 598 aa15.05■□□□□ -0
LMNA-220ENST00000504687 UBE2SQ16763 222 aa15.05■□□□□ -0
LMNA-220ENST00000504687 SPECC1Q5M775 1068 aa15.05■□□□□ -0
LMNA-220ENST00000504687 CEP57L1Q8IYX8 460 aa15.05■□□□□ -0
LMNA-220ENST00000504687 RNF214Q8ND24 703 aa15.05■□□□□ -0
LMNA-220ENST00000504687 ANO3Q9BYT9 981 aa15.05■□□□□ -0
LMNA-220ENST00000504687 CBX8Q9HC52 389 aa15.05■□□□□ -0
LMNA-220ENST00000504687 EMILIN3Q9NT22 766 aa15.05■□□□□ -0
LMNA-220ENST00000504687 SERTAD1Q9UHV2 236 aa15.05■□□□□ -0
LMNA-220ENST00000504687 MYPNQ86TC9 1320 aa15.05■□□□□ -0
LMNA-220ENST00000504687 PTPRFP10586 1907 aa15.04■□□□□ -0
LMNA-220ENST00000504687 LOC285556D6RIA3 1793 aa15.04■□□□□ -0
LMNA-220ENST00000504687 A0A087X0B3 334 aa15.04■□□□□ -0
LMNA-220ENST00000504687 GLTPD2A6NH11 291 aa15.04■□□□□ -0
LMNA-220ENST00000504687 USP2O75604 605 aaPredicted RBP15.04■□□□□ -0
LMNA-220ENST00000504687 VCAM1P19320 739 aa15.04■□□□□ -0
LMNA-220ENST00000504687 ZRSR1Q15695 479 aaKnown RBP15.04■□□□□ -0
LMNA-220ENST00000504687 Q4G0T1 1027 aa15.04■□□□□ -0
LMNA-220ENST00000504687 PDXDC2PQ6P474 469 aa15.04■□□□□ -0
LMNA-220ENST00000504687 SULF1Q8IWU6 871 aa15.04■□□□□ -0
LMNA-220ENST00000504687 RBM46Q8TBY0 533 aaKnown RBP15.04■□□□□ -0
LMNA-220ENST00000504687 RAB34Q9BZG1 259 aa15.04■□□□□ -0
LMNA-220ENST00000504687 SLC38A10Q9HBR0 1119 aa15.04■□□□□ -0
LMNA-220ENST00000504687 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.04■□□□□ -0
LMNA-220ENST00000504687 ADAMTS5Q9UNA0 930 aa15.04■□□□□ -0
LMNA-220ENST00000504687 RABGAP1Q9Y3P9 1069 aa15.04■□□□□ -0
LMNA-220ENST00000504687 ZNF536O15090 1300 aa15.03■□□□□ -0
LMNA-220ENST00000504687 SPDYE3A6NKU9 549 aa15.03■□□□□ -0
LMNA-220ENST00000504687 USP17L15C9J2P7 530 aa15.03■□□□□ -0
LMNA-220ENST00000504687 USP17L13C9JLJ4 530 aa15.03■□□□□ -0
LMNA-220ENST00000504687 USP17L11C9JVI0 530 aa15.03■□□□□ -0
LMNA-220ENST00000504687 USP17L18D6R9N7 530 aa15.03■□□□□ -0
LMNA-220ENST00000504687 USP17L22D6RA61 530 aa15.03■□□□□ -0
LMNA-220ENST00000504687 USP17L17D6RBQ6 530 aa15.03■□□□□ -0
LMNA-220ENST00000504687 USP17L19D6RCP7 530 aa15.03■□□□□ -0
LMNA-220ENST00000504687 USP17L20D6RJB6 530 aa15.03■□□□□ -0
LMNA-220ENST00000504687 SMC2O95347 1197 aa15.03■□□□□ -0
LMNA-220ENST00000504687 OAZ1P54368 228 aa15.03■□□□□ -0
LMNA-220ENST00000504687 MAP3K9P80192 1104 aa15.03■□□□□ -0
LMNA-220ENST00000504687 USP17L24Q0WX57 530 aa15.03■□□□□ -0
LMNA-220ENST00000504687 CALCRLQ16602 461 aa15.03■□□□□ -0
LMNA-220ENST00000504687 HS1BP3Q53T59 392 aa15.03■□□□□ -0
LMNA-220ENST00000504687 USP17L6PQ6QN14 398 aa15.03■□□□□ -0
LMNA-220ENST00000504687 LDHDQ86WU2 507 aa15.03■□□□□ -0
LMNA-220ENST00000504687 POTEDQ86YR6 584 aa15.03■□□□□ -0
LMNA-220ENST00000504687 KIFC2Q96AC6 838 aa15.03■□□□□ -0
LMNA-220ENST00000504687 GSDMAQ96QA5 445 aa15.03■□□□□ -0
LMNA-220ENST00000504687 DNAJC25Q9H1X3 360 aa15.03■□□□□ -0
LMNA-220ENST00000504687 KCNMB3Q9NPA1 279 aa15.03■□□□□ -0
LMNA-220ENST00000504687 DISC1Q9NRI5 854 aa15.03■□□□□ -0
LMNA-220ENST00000504687 CCDC39Q9UFE4 941 aa15.03■□□□□ -0
LMNA-220ENST00000504687 PPP1R9AQ9ULJ8 1098 aa15.03■□□□□ -0
LMNA-220ENST00000504687 SCAF8Q9UPN6 1271 aaKnown RBP15.03■□□□□ -0
LMNA-220ENST00000504687 AFG3L2Q9Y4W6 797 aa15.03■□□□□ -0
LMNA-220ENST00000504687 PCDHA5Q9Y5H7 936 aa15.03■□□□□ -0
LMNA-220ENST00000504687 IQCA1LA6NCM1 817 aa15.02■□□□□ -0
LMNA-220ENST00000504687 UNCXA6NJT0 531 aa15.02■□□□□ -0
LMNA-220ENST00000504687 GCOM1H8Y6P7 765 aaPredicted RBP15.02■□□□□ -0
LMNA-220ENST00000504687 IKBKBO14920 756 aa15.02■□□□□ -0
LMNA-220ENST00000504687 ATP2A1O14983 1001 aa15.02■□□□□ -0
LMNA-220ENST00000504687 POLR2MP0CAP2 368 aa15.02■□□□□ -0
LMNA-220ENST00000504687 EPHX2P34913 555 aa15.02■□□□□ -0
LMNA-220ENST00000504687 UBA7P41226 1012 aa15.02■□□□□ -0
LMNA-220ENST00000504687 HSD17B4P51659 736 aa15.02■□□□□ -0
LMNA-220ENST00000504687 ARHGAP4P98171 946 aa15.02■□□□□ -0
LMNA-220ENST00000504687 SPP2Q13103 211 aa15.02■□□□□ -0
LMNA-220ENST00000504687 PNOCQ13519 176 aa15.02■□□□□ -0
LMNA-220ENST00000504687 MTMR2Q13614 643 aa15.02■□□□□ -0
LMNA-220ENST00000504687 TMEM266Q2M3C6 531 aa15.02■□□□□ -0
LMNA-220ENST00000504687 SARM1Q6SZW1 724 aa15.02■□□□□ -0
LMNA-220ENST00000504687 SLFN12Q8IYM2 578 aa15.02■□□□□ -0
LMNA-220ENST00000504687 KCTD17Q8N5Z5 321 aa15.02■□□□□ -0
LMNA-220ENST00000504687 MLKLQ8NB16 471 aa15.02■□□□□ -0
LMNA-220ENST00000504687 PAGE5Q96GU1 130 aa15.02■□□□□ -0
LMNA-220ENST00000504687 EHMT1Q9H9B1 1298 aa15.02■□□□□ -0
LMNA-220ENST00000504687 DDX25Q9UHL0 483 aaKnown RBP15.02■□□□□ -0
LMNA-220ENST00000504687 STK24Q9Y6E0 443 aa15.02■□□□□ -0
LMNA-220ENST00000504687 A0A0G2JMZ2 1700 aa15.01□□□□□ -0.01
LMNA-220ENST00000504687 SMCHD1A6NHR9 2005 aa15.01□□□□□ -0.01
LMNA-220ENST00000504687 SLC37A4O43826 429 aa15.01□□□□□ -0.01
LMNA-220ENST00000504687 PPP1R12BO60237 982 aaPredicted RBP15.01□□□□□ -0.01
LMNA-220ENST00000504687 TDP2O95551 362 aa15.01□□□□□ -0.01
LMNA-220ENST00000504687 HOXA7P31268 230 aaPredicted RBP15.01□□□□□ -0.01
LMNA-220ENST00000504687 DPYDQ12882 1025 aa15.01□□□□□ -0.01
LMNA-220ENST00000504687 MORC3Q14149 939 aa15.01□□□□□ -0.01
LMNA-220ENST00000504687 ZYXQ15942 572 aaKnown RBP15.01□□□□□ -0.01
LMNA-220ENST00000504687 USH1GQ495M9 461 aa15.01□□□□□ -0.01
LMNA-220ENST00000504687 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.01□□□□□ -0.01
LMNA-220ENST00000504687 C11orf57Q6ZUT1 292 aaPredicted RBP15.01□□□□□ -0.01
LMNA-220ENST00000504687 CCDC84Q86UT8 332 aaPredicted RBP15.01□□□□□ -0.01
LMNA-220ENST00000504687 MCF2L2Q86YR7 1114 aa15.01□□□□□ -0.01
LMNA-220ENST00000504687 SMARCE1Q969G3 411 aa15.01□□□□□ -0.01
LMNA-220ENST00000504687 ZKSCAN4Q969J2 545 aaPredicted RBP15.01□□□□□ -0.01
LMNA-220ENST00000504687 DHX58Q96C10 678 aa15.01□□□□□ -0.01
LMNA-220ENST00000504687 FAM20AQ96MK3 541 aa15.01□□□□□ -0.01
LMNA-220ENST00000504687 P2RX7Q99572 595 aaKnown RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms