RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 NFIBO00712 420 aa11.87□□□□□ -0.51
TPM3-217ENST00000504663 RIOK3O14730 519 aaKnown RBP11.87□□□□□ -0.51
TPM3-217ENST00000504663 ATP2A1O14983 1001 aa11.87□□□□□ -0.51
TPM3-217ENST00000504663 PEX10O60683 326 aa11.87□□□□□ -0.51
TPM3-217ENST00000504663 MBD3O95983 291 aa11.87□□□□□ -0.51
TPM3-217ENST00000504663 MARCKSP29966 332 aaPredicted RBP11.87□□□□□ -0.51
TPM3-217ENST00000504663 HSD17B4P51659 736 aa11.87□□□□□ -0.51
TPM3-217ENST00000504663 SNW1Q13573 536 aaKnown RBP11.87□□□□□ -0.51
TPM3-217ENST00000504663 TMEM132BQ14DG7 1078 aa11.87□□□□□ -0.51
TPM3-217ENST00000504663 STK38Q15208 465 aa11.87□□□□□ -0.51
TPM3-217ENST00000504663 NONOQ15233 471 aaKnown RBP eCLIP11.87□□□□□ -0.51
TPM3-217ENST00000504663 ZNF174Q15697 407 aa11.87□□□□□ -0.51
TPM3-217ENST00000504663 CSPP1Q1MSJ5 1256 aa11.87□□□□□ -0.51
TPM3-217ENST00000504663 MUM1L1Q5H9M0 696 aa11.87□□□□□ -0.51
TPM3-217ENST00000504663 ADALQ6DHV7 355 aa11.87□□□□□ -0.51
TPM3-217ENST00000504663 SHC4Q6S5L8 630 aa11.87□□□□□ -0.51
TPM3-217ENST00000504663 TEX2Q8IWB9 1127 aa11.87□□□□□ -0.51
TPM3-217ENST00000504663 BICD2Q8TD16 824 aa11.87□□□□□ -0.51
TPM3-217ENST00000504663 TBCKQ8TEA7 893 aa11.87□□□□□ -0.51
TPM3-217ENST00000504663 MBOAT7Q96N66 472 aa11.87□□□□□ -0.51
TPM3-217ENST00000504663 CLIC6Q96NY7 704 aa11.87□□□□□ -0.51
TPM3-217ENST00000504663 ANP32EQ9BTT0 268 aa11.87□□□□□ -0.51
TPM3-217ENST00000504663 ANO3Q9BYT9 981 aa11.87□□□□□ -0.51
TPM3-217ENST00000504663 RAVER2Q9HCJ3 691 aaKnown RBP11.87□□□□□ -0.51
TPM3-217ENST00000504663 TMOD4Q9NZQ9 345 aa11.87□□□□□ -0.51
TPM3-217ENST00000504663 AGTPBP1Q9UPW5 1226 aa11.87□□□□□ -0.51
TPM3-217ENST00000504663 HPSEQ9Y251 543 aa11.87□□□□□ -0.51
TPM3-217ENST00000504663 DDX49Q9Y6V7 483 aaKnown RBP11.87□□□□□ -0.51
TPM3-217ENST00000504663 CCDC194A0A1B0GVG4 234 aa11.86□□□□□ -0.51
TPM3-217ENST00000504663 SLC37A4O43826 429 aa11.86□□□□□ -0.51
TPM3-217ENST00000504663 TDP2O95551 362 aa11.86□□□□□ -0.51
TPM3-217ENST00000504663 FDX1P10109 184 aa11.86□□□□□ -0.51
TPM3-217ENST00000504663 ATP2B1P20020 1258 aa11.86□□□□□ -0.51
TPM3-217ENST00000504663 SREBF1P36956 1147 aa11.86□□□□□ -0.51
TPM3-217ENST00000504663 OAZ1P54368 228 aa11.86□□□□□ -0.51
TPM3-217ENST00000504663 AP3B2Q13367 1082 aa11.86□□□□□ -0.51
TPM3-217ENST00000504663 COG2Q14746 738 aa11.86□□□□□ -0.51
TPM3-217ENST00000504663 SKOR2Q2VWA4 1001 aaPredicted RBP11.86□□□□□ -0.51
TPM3-217ENST00000504663 NEK8Q86SG6 692 aa11.86□□□□□ -0.51
TPM3-217ENST00000504663 LENG9Q96B70 501 aa11.86□□□□□ -0.51
TPM3-217ENST00000504663 GLT8D2Q9H1C3 349 aa11.86□□□□□ -0.51
TPM3-217ENST00000504663 R3HDMLQ9H3Y0 253 aa11.86□□□□□ -0.51
TPM3-217ENST00000504663 BTBD7Q9P203 1132 aa11.86□□□□□ -0.51
TPM3-217ENST00000504663 CCPG1Q9ULG6 757 aa11.86□□□□□ -0.51
TPM3-217ENST00000504663 NOL7Q9UMY1 257 aaKnown RBP11.86□□□□□ -0.51
TPM3-217ENST00000504663 SRPRBQ9Y5M8 271 aaKnown RBP11.86□□□□□ -0.51
TPM3-217ENST00000504663 HOXA13P31271 388 aaPredicted RBP11.85□□□□□ -0.51
TPM3-217ENST00000504663 MRPL12P52815 198 aaKnown RBP11.85□□□□□ -0.51
TPM3-217ENST00000504663 PTGDRQ13258 359 aa11.85□□□□□ -0.51
TPM3-217ENST00000504663 GSE1Q14687 1217 aa11.85□□□□□ -0.51
TPM3-217ENST00000504663 SPRYD7Q5W111 196 aa11.85□□□□□ -0.51
TPM3-217ENST00000504663 RESP18Q5W5W9 173 aa11.85□□□□□ -0.51
TPM3-217ENST00000504663 GADL1Q6ZQY3 521 aa11.85□□□□□ -0.51
TPM3-217ENST00000504663 RASAL3Q86YV0 1011 aa11.85□□□□□ -0.51
TPM3-217ENST00000504663 BRI3BPQ8WY22 251 aa11.85□□□□□ -0.51
TPM3-217ENST00000504663 ASCC2Q9H1I8 757 aaPredicted RBP11.85□□□□□ -0.51
TPM3-217ENST00000504663 MRPL11Q9Y3B7 192 aaKnown RBP11.85□□□□□ -0.51
TPM3-217ENST00000504663 CYP3A7-CYP3A51PA0A087WV96 503 aa11.84□□□□□ -0.51
TPM3-217ENST00000504663 CUTAO60888 179 aa11.84□□□□□ -0.51
TPM3-217ENST00000504663 NR1I2O75469 434 aa11.84□□□□□ -0.51
TPM3-217ENST00000504663 CYP3A7P24462 503 aa11.84□□□□□ -0.51
TPM3-217ENST00000504663 MCM7P33993 719 aa11.84□□□□□ -0.51
TPM3-217ENST00000504663 ME1P48163 572 aa11.84□□□□□ -0.51
TPM3-217ENST00000504663 ORC2Q13416 577 aaPredicted RBP11.84□□□□□ -0.51
TPM3-217ENST00000504663 PPP4R3AQ6IN85 833 aa11.84□□□□□ -0.51
TPM3-217ENST00000504663 CAVIN1Q6NZI2 390 aaKnown RBP11.84□□□□□ -0.51
TPM3-217ENST00000504663 SLC30A10Q6XR72 485 aa11.84□□□□□ -0.51
TPM3-217ENST00000504663 USP49Q70CQ1 688 aa11.84□□□□□ -0.51
TPM3-217ENST00000504663 CCAR1Q8IX12 1150 aaKnown RBP11.84□□□□□ -0.51
TPM3-217ENST00000504663 FMR1NBQ8N0W7 255 aaPredicted RBP11.84□□□□□ -0.51
TPM3-217ENST00000504663 KRI1Q8N9T8 703 aaKnown RBP11.84□□□□□ -0.51
TPM3-217ENST00000504663 FSIP1Q8NA03 581 aa11.84□□□□□ -0.51
TPM3-217ENST00000504663 SLC10A4Q96EP9 437 aa11.84□□□□□ -0.51
TPM3-217ENST00000504663 MTMR9Q96QG7 549 aa11.84□□□□□ -0.51
TPM3-217ENST00000504663 TXNRD2Q9NNW7 524 aa11.84□□□□□ -0.51
TPM3-217ENST00000504663 SSUH2Q9Y2M2 353 aa11.84□□□□□ -0.51
TPM3-217ENST00000504663 ADGRA2Q96PE1 1338 aa11.84□□□□□ -0.51
TPM3-217ENST00000504663 IGLV3-22A0A075B6J6 115 aa11.83□□□□□ -0.52
TPM3-217ENST00000504663 A0A087X0B3 334 aa11.83□□□□□ -0.52
TPM3-217ENST00000504663 TESPA1A2RU30 521 aaPredicted RBP11.83□□□□□ -0.52
TPM3-217ENST00000504663 ZBED4O75132 1171 aa11.83□□□□□ -0.52
TPM3-217ENST00000504663 BMP15O95972 392 aa11.83□□□□□ -0.52
TPM3-217ENST00000504663 CYP3A4P08684 503 aa11.83□□□□□ -0.52
TPM3-217ENST00000504663 ZBTB48P10074 688 aaPredicted RBP11.83□□□□□ -0.52
TPM3-217ENST00000504663 PFKFB1P16118 471 aa11.83□□□□□ -0.52
TPM3-217ENST00000504663 CMA1P23946 247 aa11.83□□□□□ -0.52
TPM3-217ENST00000504663 CIITAP33076 1130 aa11.83□□□□□ -0.52
TPM3-217ENST00000504663 NDUFA8P51970 172 aa11.83□□□□□ -0.52
TPM3-217ENST00000504663 HERVK_113P62684 666 aa11.83□□□□□ -0.52
TPM3-217ENST00000504663 TRAF1Q13077 416 aa11.83□□□□□ -0.52
TPM3-217ENST00000504663 SNAPC2Q13487 334 aa11.83□□□□□ -0.52
TPM3-217ENST00000504663 LETM2Q2VYF4 491 aa11.83□□□□□ -0.52
TPM3-217ENST00000504663 SNRNP48Q6IEG0 339 aaKnown RBP11.83□□□□□ -0.52
TPM3-217ENST00000504663 RBM43Q6ZSC3 357 aaKnown RBP11.83□□□□□ -0.52
TPM3-217ENST00000504663 CPXCR1Q8N123 301 aa11.83□□□□□ -0.52
TPM3-217ENST00000504663 C2orf69Q8N8R5 385 aa11.83□□□□□ -0.52
TPM3-217ENST00000504663 ZNF579Q8NAF0 562 aaKnown RBP11.83□□□□□ -0.52
TPM3-217ENST00000504663 SYTL5Q8TDW5 730 aaPredicted RBP11.83□□□□□ -0.52
TPM3-217ENST00000504663 MRPS27Q92552 414 aaKnown RBP11.83□□□□□ -0.52
TPM3-217ENST00000504663 HAS1Q92839 578 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms