RNA–Protein interactions for RNA: ENST00000504627.1

SQSTM1-209, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-209ENST00000504627 BEX3Q00994 111 aa20.99■□□□□ 0.95
SQSTM1-209ENST00000504627 ASPRV1Q53RT3 343 aa20.99■□□□□ 0.95
SQSTM1-209ENST00000504627 IFIT1BQ5T764 474 aaKnown RBP20.99■□□□□ 0.95
SQSTM1-209ENST00000504627 IQSEC1Q6DN90 963 aa20.99■□□□□ 0.95
SQSTM1-209ENST00000504627 SLC30A10Q6XR72 485 aa20.99■□□□□ 0.95
SQSTM1-209ENST00000504627 TLK2Q86UE8 772 aa20.99■□□□□ 0.95
SQSTM1-209ENST00000504627 TOX2Q96NM4 488 aa20.99■□□□□ 0.95
SQSTM1-209ENST00000504627 MPHOSPH6Q99547 160 aaKnown RBP20.99■□□□□ 0.95
SQSTM1-209ENST00000504627 PDGFCQ9NRA1 345 aa20.99■□□□□ 0.95
SQSTM1-209ENST00000504627 A0A0U1RQG5 324 aaPredicted RBP20.98■□□□□ 0.95
SQSTM1-209ENST00000504627 DYNC1LI2O43237 492 aaPredicted RBP20.98■□□□□ 0.95
SQSTM1-209ENST00000504627 PARP1P09874 1014 aaKnown RBP20.98■□□□□ 0.95
SQSTM1-209ENST00000504627 SMPD1P17405 629 aa20.98■□□□□ 0.95
SQSTM1-209ENST00000504627 ANKRD33Q7Z3H0 272 aa20.98■□□□□ 0.95
SQSTM1-209ENST00000504627 CLEC4DQ8WXI8 215 aa20.98■□□□□ 0.95
SQSTM1-209ENST00000504627 GNEQ9Y223 722 aaKnown RBP20.98■□□□□ 0.95
SQSTM1-209ENST00000504627 RBM19Q9Y4C8 960 aaKnown RBP20.98■□□□□ 0.95
SQSTM1-209ENST00000504627 U3KPZ7 1027 aaPredicted RBP20.98■□□□□ 0.95
SQSTM1-209ENST00000504627 MROH7Q68CQ1 1323 aa20.98■□□□□ 0.95
SQSTM1-209ENST00000504627 LOC102724159A0A0B4J2E5 919 aa20.97■□□□□ 0.95
SQSTM1-209ENST00000504627 ZEB2O60315 1214 aa20.97■□□□□ 0.95
SQSTM1-209ENST00000504627 RPS6P62753 249 aaKnown RBP20.97■□□□□ 0.95
SQSTM1-209ENST00000504627 PWP2Q15269 919 aaKnown RBP20.97■□□□□ 0.95
SQSTM1-209ENST00000504627 CDC37Q16543 378 aaPredicted RBP20.97■□□□□ 0.95
SQSTM1-209ENST00000504627 TAPT1Q6NXT6 567 aa20.97■□□□□ 0.95
SQSTM1-209ENST00000504627 ADGRF4Q8IZF3 695 aa20.97■□□□□ 0.95
SQSTM1-209ENST00000504627 DEFB123Q8N688 67 aa20.97■□□□□ 0.95
SQSTM1-209ENST00000504627 MORC4Q8TE76 937 aa20.97■□□□□ 0.95
SQSTM1-209ENST00000504627 B4DLN1 442 aa20.96■□□□□ 0.95
SQSTM1-209ENST00000504627 KIAA0355O15063 1070 aa20.96■□□□□ 0.95
SQSTM1-209ENST00000504627 MRPL12P52815 198 aaKnown RBP20.96■□□□□ 0.95
SQSTM1-209ENST00000504627 PDE4DQ08499 809 aa20.96■□□□□ 0.95
SQSTM1-209ENST00000504627 FAAP100Q0VG06 881 aa20.96■□□□□ 0.95
SQSTM1-209ENST00000504627 SHHQ15465 462 aa20.96■□□□□ 0.95
SQSTM1-209ENST00000504627 FSCN1Q16658 493 aaKnown RBP20.96■□□□□ 0.95
SQSTM1-209ENST00000504627 VAT1LQ9HCJ6 419 aa20.96■□□□□ 0.95
SQSTM1-209ENST00000504627 Q9Y3F1 56 aa20.96■□□□□ 0.95
SQSTM1-209ENST00000504627 LTBP2Q14767 1821 aa20.95■□□□□ 0.94
SQSTM1-209ENST00000504627 ARVCFO00192 962 aa20.95■□□□□ 0.94
SQSTM1-209ENST00000504627 CTAGE5O15320 804 aa20.95■□□□□ 0.94
SQSTM1-209ENST00000504627 TLR3O15455 904 aaKnown RBP20.95■□□□□ 0.94
SQSTM1-209ENST00000504627 CABYRO75952 493 aa20.95■□□□□ 0.94
SQSTM1-209ENST00000504627 ITGB8P26012 769 aa20.95■□□□□ 0.94
SQSTM1-209ENST00000504627 NKX3-2P78367 333 aa20.95■□□□□ 0.94
SQSTM1-209ENST00000504627 PTH1RQ03431 593 aa20.95■□□□□ 0.94
SQSTM1-209ENST00000504627 Q7L0L9 218 aa20.95■□□□□ 0.94
SQSTM1-209ENST00000504627 RALYLQ86SE5 291 aaKnown RBP20.95■□□□□ 0.94
SQSTM1-209ENST00000504627 ABCB11O95342 1321 aa20.95■□□□□ 0.94
SQSTM1-209ENST00000504627 ERICH2A1L162 156 aa20.94■□□□□ 0.94
SQSTM1-209ENST00000504627 CYP21A2P08686 494 aa20.94■□□□□ 0.94
SQSTM1-209ENST00000504627 PTGS1P23219 599 aa20.94■□□□□ 0.94
SQSTM1-209ENST00000504627 CDK7P50613 346 aa20.94■□□□□ 0.94
SQSTM1-209ENST00000504627 C9orf50Q5SZB4 431 aa20.94■□□□□ 0.94
SQSTM1-209ENST00000504627 CXCL17Q6UXB2 119 aa20.94■□□□□ 0.94
SQSTM1-209ENST00000504627 CYB5R4Q7L1T6 521 aa20.94■□□□□ 0.94
SQSTM1-209ENST00000504627 DNERQ8NFT8 737 aa20.94■□□□□ 0.94
SQSTM1-209ENST00000504627 WDR11Q9BZH6 1224 aa20.94■□□□□ 0.94
SQSTM1-209ENST00000504627 FPGSQ05932 587 aa20.93■□□□□ 0.94
SQSTM1-209ENST00000504627 QRICH1Q2TAL8 776 aa20.93■□□□□ 0.94
SQSTM1-209ENST00000504627 DUSP28Q4G0W2 176 aa20.93■□□□□ 0.94
SQSTM1-209ENST00000504627 TMEM63BQ5T3F8 832 aa20.93■□□□□ 0.94
SQSTM1-209ENST00000504627 FBXO11Q86XK2 927 aa20.93■□□□□ 0.94
SQSTM1-209ENST00000504627 MCF2L2Q86YR7 1114 aa20.93■□□□□ 0.94
SQSTM1-209ENST00000504627 RGS22Q8NE09 1264 aa20.93■□□□□ 0.94
SQSTM1-209ENST00000504627 MAP4K1Q92918 833 aa20.93■□□□□ 0.94
SQSTM1-209ENST00000504627 IFIT3O14879 490 aaKnown RBP20.92■□□□□ 0.94
SQSTM1-209ENST00000504627 TIMP1P01033 207 aa20.92■□□□□ 0.94
SQSTM1-209ENST00000504627 HSPA4P34932 840 aa20.92■□□□□ 0.94
SQSTM1-209ENST00000504627 ANAPC15P60006 121 aa20.92■□□□□ 0.94
SQSTM1-209ENST00000504627 SART3Q15020 963 aaKnown RBP20.92■□□□□ 0.94
SQSTM1-209ENST00000504627 SEC23AQ15436 765 aa20.92■□□□□ 0.94
SQSTM1-209ENST00000504627 NCOA7Q8NI08 942 aa20.92■□□□□ 0.94
SQSTM1-209ENST00000504627 IL17RAQ96F46 866 aa20.92■□□□□ 0.94
SQSTM1-209ENST00000504627 JMJD4Q9H9V9 463 aa20.92■□□□□ 0.94
SQSTM1-209ENST00000504627 MRPL11Q9Y3B7 192 aaKnown RBP20.92■□□□□ 0.94
SQSTM1-209ENST00000504627 KLRF2D3W0D1 207 aa20.91■□□□□ 0.94
SQSTM1-209ENST00000504627 LCTP09848 1927 aa20.91■□□□□ 0.94
SQSTM1-209ENST00000504627 ANP32AP39687 249 aaKnown RBP20.91■□□□□ 0.94
SQSTM1-209ENST00000504627 ITGA7Q13683 1181 aa20.91■□□□□ 0.94
SQSTM1-209ENST00000504627 PPP2R5BQ15173 497 aa20.91■□□□□ 0.94
SQSTM1-209ENST00000504627 STAG2Q8N3U4 1231 aa20.91■□□□□ 0.94
SQSTM1-209ENST00000504627 MAF1Q9H063 256 aa20.91■□□□□ 0.94
SQSTM1-209ENST00000504627 TBX21Q9UL17 535 aa20.91■□□□□ 0.94
SQSTM1-209ENST00000504627 RBM8AQ9Y5S9 174 aaKnown RBP20.91■□□□□ 0.94
SQSTM1-209ENST00000504627 LRRC37A2A6NM11 1700 aa20.9■□□□□ 0.94
SQSTM1-209ENST00000504627 E7EWF7 191 aa20.9■□□□□ 0.94
SQSTM1-209ENST00000504627 CPT1AP50416 773 aa20.9■□□□□ 0.94
SQSTM1-209ENST00000504627 BRDTQ58F21 947 aaPredicted RBP20.9■□□□□ 0.94
SQSTM1-209ENST00000504627 FAM126BQ8IXS8 530 aa20.9■□□□□ 0.94
SQSTM1-209ENST00000504627 OR6J1Q8NGC5 347 aa20.9■□□□□ 0.94
SQSTM1-209ENST00000504627 SCFD2Q8WU76 684 aa20.9■□□□□ 0.94
SQSTM1-209ENST00000504627 TBC1D5Q92609 795 aa20.9■□□□□ 0.94
SQSTM1-209ENST00000504627 RNPC3Q96LT9 517 aaKnown RBP20.9■□□□□ 0.94
SQSTM1-209ENST00000504627 RBM47A0AV96 593 aaKnown RBP20.89■□□□□ 0.93
SQSTM1-209ENST00000504627 EDNRBP24530 442 aa20.89■□□□□ 0.93
SQSTM1-209ENST00000504627 WTAPQ15007 396 aa20.89■□□□□ 0.93
SQSTM1-209ENST00000504627 RNF20Q5VTR2 975 aa20.89■□□□□ 0.93
SQSTM1-209ENST00000504627 MFSD5Q6N075 450 aa20.89■□□□□ 0.93
SQSTM1-209ENST00000504627 AMNQ9BXJ7 453 aa20.89■□□□□ 0.93
SQSTM1-209ENST00000504627 SEZ6LQ9BYH1 1024 aa20.89■□□□□ 0.93
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