RNA–Protein interactions for RNA: ENST00000504616.1

AP003478.1-201, humanhuman

BASIC

Gene AP003478.1, Length 833 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003478.1-201ENST00000504616 PDE4DQ08499 809 aa12.19□□□□□ -0.46
AP003478.1-201ENST00000504616 SNX17Q15036 470 aa12.19□□□□□ -0.46
AP003478.1-201ENST00000504616 QRICH1Q2TAL8 776 aa12.19□□□□□ -0.46
AP003478.1-201ENST00000504616 TMEM67Q5HYA8 995 aa12.19□□□□□ -0.46
AP003478.1-201ENST00000504616 CASC1Q6TDU7 716 aa12.19□□□□□ -0.46
AP003478.1-201ENST00000504616 FBXO11Q86XK2 927 aa12.19□□□□□ -0.46
AP003478.1-201ENST00000504616 KLHDC9Q8NEP7 349 aa12.19□□□□□ -0.46
AP003478.1-201ENST00000504616 GLT1D1Q96MS3 346 aa12.19□□□□□ -0.46
AP003478.1-201ENST00000504616 AP5M1Q9H0R1 490 aa12.19□□□□□ -0.46
AP003478.1-201ENST00000504616 JMJD4Q9H9V9 463 aa12.19□□□□□ -0.46
AP003478.1-201ENST00000504616 VTA1Q9NP79 307 aa12.19□□□□□ -0.46
AP003478.1-201ENST00000504616 PDGFCQ9NRA1 345 aa12.19□□□□□ -0.46
AP003478.1-201ENST00000504616 LAMA3Q16787 3333 aa12.18□□□□□ -0.46
AP003478.1-201ENST00000504616 NEFLP07196 543 aa12.18□□□□□ -0.46
AP003478.1-201ENST00000504616 ASGR1P07306 291 aa12.18□□□□□ -0.46
AP003478.1-201ENST00000504616 SMPD1P17405 629 aa12.18□□□□□ -0.46
AP003478.1-201ENST00000504616 PTGS1P23219 599 aa12.18□□□□□ -0.46
AP003478.1-201ENST00000504616 CST5P28325 142 aaPredicted RBP12.18□□□□□ -0.46
AP003478.1-201ENST00000504616 CATIPQ7Z7H3 387 aa12.18□□□□□ -0.46
AP003478.1-201ENST00000504616 HOMER1Q86YM7 354 aa12.18□□□□□ -0.46
AP003478.1-201ENST00000504616 MB21D2Q8IYB1 491 aaPredicted RBP12.18□□□□□ -0.46
AP003478.1-201ENST00000504616 TDHQ8IZJ6 230 aa12.18□□□□□ -0.46
AP003478.1-201ENST00000504616 LSG1Q9H089 658 aaKnown RBP12.18□□□□□ -0.46
AP003478.1-201ENST00000504616 UPF3AQ9H1J1 476 aaKnown RBP12.18□□□□□ -0.46
AP003478.1-201ENST00000504616 SENP2Q9HC62 589 aa12.18□□□□□ -0.46
AP003478.1-201ENST00000504616 PDLIM7Q9NR12 457 aa12.18□□□□□ -0.46
AP003478.1-201ENST00000504616 MAD2L2Q9UI95 211 aa12.18□□□□□ -0.46
AP003478.1-201ENST00000504616 LOC102724159A0A0B4J2E5 919 aa12.17□□□□□ -0.46
AP003478.1-201ENST00000504616 B4DLN1 442 aa12.17□□□□□ -0.46
AP003478.1-201ENST00000504616 SLC27A2O14975 620 aa12.17□□□□□ -0.46
AP003478.1-201ENST00000504616 DYNC1LI2O43237 492 aaPredicted RBP12.17□□□□□ -0.46
AP003478.1-201ENST00000504616 CLTBP09497 229 aa12.17□□□□□ -0.46
AP003478.1-201ENST00000504616 MRPL12P52815 198 aaKnown RBP12.17□□□□□ -0.46
AP003478.1-201ENST00000504616 ANTXR2P58335 489 aa12.17□□□□□ -0.46
AP003478.1-201ENST00000504616 GRM4Q14833 912 aa12.17□□□□□ -0.46
AP003478.1-201ENST00000504616 PWP2Q15269 919 aaKnown RBP12.17□□□□□ -0.46
AP003478.1-201ENST00000504616 FSCN1Q16658 493 aaKnown RBP12.17□□□□□ -0.46
AP003478.1-201ENST00000504616 C1orf53Q5VUE5 145 aa12.17□□□□□ -0.46
AP003478.1-201ENST00000504616 IQSEC1Q6DN90 963 aa12.17□□□□□ -0.46
AP003478.1-201ENST00000504616 CCSAPQ6IQ19 270 aaPredicted RBP12.17□□□□□ -0.46
AP003478.1-201ENST00000504616 TAPT1Q6NXT6 567 aa12.17□□□□□ -0.46
AP003478.1-201ENST00000504616 MCF2L2Q86YR7 1114 aa12.17□□□□□ -0.46
AP003478.1-201ENST00000504616 DNERQ8NFT8 737 aa12.17□□□□□ -0.46
AP003478.1-201ENST00000504616 MORC4Q8TE76 937 aa12.17□□□□□ -0.46
AP003478.1-201ENST00000504616 AMNQ9BXJ7 453 aa12.17□□□□□ -0.46
AP003478.1-201ENST00000504616 GNEQ9Y223 722 aaKnown RBP12.17□□□□□ -0.46
AP003478.1-201ENST00000504616 MRPL11Q9Y3B7 192 aaKnown RBP12.17□□□□□ -0.46
AP003478.1-201ENST00000504616 SZT2Q5T011 3432 aa12.17□□□□□ -0.46
AP003478.1-201ENST00000504616 MROH7Q68CQ1 1323 aa12.16□□□□□ -0.46
AP003478.1-201ENST00000504616 A0A0U1RQG5 324 aaPredicted RBP12.16□□□□□ -0.46
AP003478.1-201ENST00000504616 PALM3A6NDB9 673 aaPredicted RBP12.16□□□□□ -0.46
AP003478.1-201ENST00000504616 DCDC2CA8MYV0 355 aa12.16□□□□□ -0.46
AP003478.1-201ENST00000504616 ZBTB5O15062 677 aa12.16□□□□□ -0.46
AP003478.1-201ENST00000504616 PRC1O43663 620 aa12.16□□□□□ -0.46
AP003478.1-201ENST00000504616 ZEB2O60315 1214 aa12.16□□□□□ -0.46
AP003478.1-201ENST00000504616 CDC45O75419 566 aa12.16□□□□□ -0.46
AP003478.1-201ENST00000504616 CFBP00751 764 aa12.16□□□□□ -0.46
AP003478.1-201ENST00000504616 MCM5P33992 734 aa12.16□□□□□ -0.46
AP003478.1-201ENST00000504616 PPP2R5BQ15173 497 aa12.16□□□□□ -0.46
AP003478.1-201ENST00000504616 TMEM63BQ5T3F8 832 aa12.16□□□□□ -0.46
AP003478.1-201ENST00000504616 CREB3L3Q68CJ9 461 aa12.16□□□□□ -0.46
AP003478.1-201ENST00000504616 CXCL17Q6UXB2 119 aa12.16□□□□□ -0.46
AP003478.1-201ENST00000504616 NFXL1Q6ZNB6 911 aa12.16□□□□□ -0.46
AP003478.1-201ENST00000504616 SH3RF1Q7Z6J0 888 aa12.16□□□□□ -0.46
AP003478.1-201ENST00000504616 RGS22Q8NE09 1264 aa12.16□□□□□ -0.46
AP003478.1-201ENST00000504616 TBC1D5Q92609 795 aa12.16□□□□□ -0.46
AP003478.1-201ENST00000504616 BADQ92934 168 aa12.16□□□□□ -0.46
AP003478.1-201ENST00000504616 WDR11Q9BZH6 1224 aa12.16□□□□□ -0.46
AP003478.1-201ENST00000504616 TMEM39AQ9NV64 488 aa12.16□□□□□ -0.46
AP003478.1-201ENST00000504616 BAZ2BQ9UIF8 2168 aaKnown RBP12.16□□□□□ -0.46
AP003478.1-201ENST00000504616 KIAA1217Q5T5P2 1943 aa12.15□□□□□ -0.46
AP003478.1-201ENST00000504616 ELP1O95163 1332 aa12.15□□□□□ -0.46
AP003478.1-201ENST00000504616 TRIM43BA6NCK2 446 aa12.15□□□□□ -0.46
AP003478.1-201ENST00000504616 CCDC69A6NI79 296 aa12.15□□□□□ -0.46
AP003478.1-201ENST00000504616 SOX1O00570 391 aaPredicted RBP12.15□□□□□ -0.46
AP003478.1-201ENST00000504616 CTAGE5O15320 804 aa12.15□□□□□ -0.46
AP003478.1-201ENST00000504616 RAG1P15918 1043 aa12.15□□□□□ -0.46
AP003478.1-201ENST00000504616 TROAPQ12815 778 aa12.15□□□□□ -0.46
AP003478.1-201ENST00000504616 DUSP28Q4G0W2 176 aa12.15□□□□□ -0.46
AP003478.1-201ENST00000504616 RNF20Q5VTR2 975 aa12.15□□□□□ -0.46
AP003478.1-201ENST00000504616 ZNF654Q8IZM8 581 aa12.15□□□□□ -0.46
AP003478.1-201ENST00000504616 OR6J1Q8NGC5 347 aa12.15□□□□□ -0.46
AP003478.1-201ENST00000504616 CTCFLQ8NI51 663 aaPredicted RBP12.15□□□□□ -0.46
AP003478.1-201ENST00000504616 SYTL5Q8TDW5 730 aaPredicted RBP12.15□□□□□ -0.46
AP003478.1-201ENST00000504616 SCFD2Q8WU76 684 aa12.15□□□□□ -0.46
AP003478.1-201ENST00000504616 PIBF1Q8WXW3 757 aa12.15□□□□□ -0.46
AP003478.1-201ENST00000504616 TRIM43Q96BQ3 446 aaPredicted RBP12.15□□□□□ -0.46
AP003478.1-201ENST00000504616 LRCH3Q96II8 777 aa12.15□□□□□ -0.46
AP003478.1-201ENST00000504616 PIGSQ96S52 555 aa12.15□□□□□ -0.46
AP003478.1-201ENST00000504616 RMDN3Q96TC7 470 aa12.15□□□□□ -0.46
AP003478.1-201ENST00000504616 MYL10Q9BUA6 226 aa12.15□□□□□ -0.46
AP003478.1-201ENST00000504616 LY9Q9HBG7 655 aa12.15□□□□□ -0.46
AP003478.1-201ENST00000504616 GPHNQ9NQX3 736 aaPredicted RBP12.15□□□□□ -0.46
AP003478.1-201ENST00000504616 PCDHA1Q9Y5I3 950 aa12.15□□□□□ -0.46
AP003478.1-201ENST00000504616 ARVCFO00192 962 aa12.14□□□□□ -0.47
AP003478.1-201ENST00000504616 PPP1R11O60927 126 aaPredicted RBP12.14□□□□□ -0.47
AP003478.1-201ENST00000504616 EIF2AK2P19525 551 aaKnown RBP12.14□□□□□ -0.47
AP003478.1-201ENST00000504616 EDNRBP24530 442 aa12.14□□□□□ -0.47
AP003478.1-201ENST00000504616 KIF5BP33176 963 aa12.14□□□□□ -0.47
AP003478.1-201ENST00000504616 NECTIN1Q15223 517 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms