RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 SLURP1P55000 103 aa6.64□□□□□ -1.35
SUB1-204ENST00000504016 COL9A2Q14055 689 aaPredicted RBP6.64□□□□□ -1.35
SUB1-204ENST00000504016 HEATR6Q6AI08 1181 aaKnown RBP6.64□□□□□ -1.35
SUB1-204ENST00000504016 FRMD5Q7Z6J6 570 aa6.64□□□□□ -1.35
SUB1-204ENST00000504016 ADAT2Q7Z6V5 191 aaKnown RBP6.64□□□□□ -1.35
SUB1-204ENST00000504016 CAPN10Q9HC96 672 aa6.64□□□□□ -1.35
SUB1-204ENST00000504016 GINM1Q9NU53 330 aa6.64□□□□□ -1.35
SUB1-204ENST00000504016 PLA2G2DQ9UNK4 145 aa6.64□□□□□ -1.35
SUB1-204ENST00000504016 INPP5FQ9Y2H2 1132 aa6.64□□□□□ -1.35
SUB1-204ENST00000504016 PMF1-BGLAPU3KQ54 211 aa6.64□□□□□ -1.35
SUB1-204ENST00000504016 NCAM1P13591 858 aa6.63□□□□□ -1.35
SUB1-204ENST00000504016 FBLN1P23142 703 aa6.63□□□□□ -1.35
SUB1-204ENST00000504016 EIF6P56537 245 aaKnown RBP6.63□□□□□ -1.35
SUB1-204ENST00000504016 EEF1DP3Q658K8 133 aa6.63□□□□□ -1.35
SUB1-204ENST00000504016 RCSD1Q6JBY9 416 aa6.63□□□□□ -1.35
SUB1-204ENST00000504016 NPM2Q86SE8 214 aaKnown RBP6.63□□□□□ -1.35
SUB1-204ENST00000504016 CABP7Q86V35 215 aa6.63□□□□□ -1.35
SUB1-204ENST00000504016 FNIP1Q8TF40 1166 aa6.63□□□□□ -1.35
SUB1-204ENST00000504016 ALG3Q92685 438 aa6.63□□□□□ -1.35
SUB1-204ENST00000504016 TGIF2Q9GZN2 237 aa6.63□□□□□ -1.35
SUB1-204ENST00000504016 RNF38Q9H0F5 515 aa6.63□□□□□ -1.35
SUB1-204ENST00000504016 GBP3Q9H0R5 595 aa6.63□□□□□ -1.35
SUB1-204ENST00000504016 RXFP1Q9HBX9 757 aa6.63□□□□□ -1.35
SUB1-204ENST00000504016 STXBP3O00186 592 aa6.62□□□□□ -1.35
SUB1-204ENST00000504016 VAMP4O75379 141 aa6.62□□□□□ -1.35
SUB1-204ENST00000504016 PPM1BO75688 479 aa6.62□□□□□ -1.35
SUB1-204ENST00000504016 PLA2G1BP04054 148 aaKnown RBP6.62□□□□□ -1.35
SUB1-204ENST00000504016 DPY19L1Q2PZI1 675 aa6.62□□□□□ -1.35
SUB1-204ENST00000504016 DBX2Q6ZNG2 339 aa6.62□□□□□ -1.35
SUB1-204ENST00000504016 ADGRG2Q8IZP9 1017 aa6.62□□□□□ -1.35
SUB1-204ENST00000504016 LZTR1Q8N653 840 aa6.62□□□□□ -1.35
SUB1-204ENST00000504016 FGD4Q96M96 766 aa6.62□□□□□ -1.35
SUB1-204ENST00000504016 PHAXQ9H814 394 aaKnown RBP6.62□□□□□ -1.35
SUB1-204ENST00000504016 PCDHB10Q9UN67 800 aa6.62□□□□□ -1.35
SUB1-204ENST00000504016 EFR3BQ9Y2G0 817 aa6.62□□□□□ -1.35
SUB1-204ENST00000504016 A0A1B0GTL3 188 aa6.61□□□□□ -1.35
SUB1-204ENST00000504016 AURKAO14965 403 aa6.61□□□□□ -1.35
SUB1-204ENST00000504016 ASGR2P07307 311 aa6.61□□□□□ -1.35
SUB1-204ENST00000504016 GLI4P10075 376 aa6.61□□□□□ -1.35
SUB1-204ENST00000504016 MC3RP41968 323 aa6.61□□□□□ -1.35
SUB1-204ENST00000504016 SEPHS1P49903 392 aa6.61□□□□□ -1.35
SUB1-204ENST00000504016 SLC7A5Q01650 507 aa6.61□□□□□ -1.35
SUB1-204ENST00000504016 PLP2Q04941 152 aa6.61□□□□□ -1.35
SUB1-204ENST00000504016 VWA3BQ502W6 1294 aa6.61□□□□□ -1.35
SUB1-204ENST00000504016 LIPIQ6XZB0 460 aa6.61□□□□□ -1.35
SUB1-204ENST00000504016 GPRASP2Q96D09 838 aa6.61□□□□□ -1.35
SUB1-204ENST00000504016 SPATA32Q96LK8 384 aa6.61□□□□□ -1.35
SUB1-204ENST00000504016 MCMBPQ9BTE3 642 aa6.61□□□□□ -1.35
SUB1-204ENST00000504016 KLHL25Q9H0H3 589 aa6.61□□□□□ -1.35
SUB1-204ENST00000504016 RWDD3Q9Y3V2 267 aa6.61□□□□□ -1.35
SUB1-204ENST00000504016 C2orf71A6NGG8 1288 aa6.6□□□□□ -1.35
SUB1-204ENST00000504016 EPHX1P07099 455 aa6.6□□□□□ -1.35
SUB1-204ENST00000504016 SAPCD2Q86UD0 394 aa6.6□□□□□ -1.35
SUB1-204ENST00000504016 ZNF526Q8TF50 670 aaPredicted RBP6.6□□□□□ -1.35
SUB1-204ENST00000504016 SPATA25Q9BR10 227 aa6.6□□□□□ -1.35
SUB1-204ENST00000504016 BDH2Q9BUT1 245 aa6.6□□□□□ -1.35
SUB1-204ENST00000504016 BCAS3Q9H6U6 928 aa6.6□□□□□ -1.35
SUB1-204ENST00000504016 USP40Q9NVE5 1235 aa6.6□□□□□ -1.35
SUB1-204ENST00000504016 NUDT5Q9UKK9 219 aa6.6□□□□□ -1.35
SUB1-204ENST00000504016 JAG2Q9Y219 1238 aa6.6□□□□□ -1.35
SUB1-204ENST00000504016 A0A1W2PQH9 124 aa6.59□□□□□ -1.35
SUB1-204ENST00000504016 PRICKLE3O43900 615 aaPredicted RBP6.59□□□□□ -1.35
SUB1-204ENST00000504016 SOX9P48436 509 aa6.59□□□□□ -1.35
SUB1-204ENST00000504016 GIPRP48546 466 aa6.59□□□□□ -1.35
SUB1-204ENST00000504016 NASPP49321 788 aaPredicted RBP6.59□□□□□ -1.35
SUB1-204ENST00000504016 HTRA3P83110 453 aa6.59□□□□□ -1.35
SUB1-204ENST00000504016 AMPD2Q01433 879 aa6.59□□□□□ -1.35
SUB1-204ENST00000504016 RTP5Q14D33 572 aa6.59□□□□□ -1.35
SUB1-204ENST00000504016 PPP2R5EQ16537 467 aa6.59□□□□□ -1.35
SUB1-204ENST00000504016 UBXN11Q5T124 520 aa6.59□□□□□ -1.35
SUB1-204ENST00000504016 NT5DC1Q5TFE4 455 aa6.59□□□□□ -1.35
SUB1-204ENST00000504016 CPNE8Q86YQ8 564 aa6.59□□□□□ -1.35
SUB1-204ENST00000504016 USP33Q8TEY7 942 aa6.59□□□□□ -1.35
SUB1-204ENST00000504016 PEX11GQ96HA9 241 aa6.59□□□□□ -1.35
SUB1-204ENST00000504016 IGSF5Q9NSI5 407 aa6.59□□□□□ -1.35
SUB1-204ENST00000504016 CGGBP1Q9UFW8 167 aaPredicted RBP6.59□□□□□ -1.35
SUB1-204ENST00000504016 SUGT1Q9Y2Z0 365 aa6.59□□□□□ -1.35
SUB1-204ENST00000504016 BACE2Q9Y5Z0 518 aa6.59□□□□□ -1.35
SUB1-204ENST00000504016 PAMP19021 973 aa6.58□□□□□ -1.36
SUB1-204ENST00000504016 PMLP29590 882 aa6.58□□□□□ -1.36
SUB1-204ENST00000504016 B3GNT8Q7Z7M8 397 aa6.58□□□□□ -1.36
SUB1-204ENST00000504016 ARHGEF39Q8N4T4 335 aa6.58□□□□□ -1.36
SUB1-204ENST00000504016 C19orf47Q8N9M1 422 aaKnown RBP6.58□□□□□ -1.36
SUB1-204ENST00000504016 NETO2Q8NC67 525 aa6.58□□□□□ -1.36
SUB1-204ENST00000504016 OR6P1Q8NGX9 317 aa6.58□□□□□ -1.36
SUB1-204ENST00000504016 TSPAN17Q96FV3 270 aa6.58□□□□□ -1.36
SUB1-204ENST00000504016 GULP1Q9UBP9 304 aa6.58□□□□□ -1.36
SUB1-204ENST00000504016 NPHP3-ACAD11A0A0J9YXS1 232 aa6.57□□□□□ -1.36
SUB1-204ENST00000504016 SH3D21A4FU49 640 aa6.57□□□□□ -1.36
SUB1-204ENST00000504016 PPP1R11O60927 126 aaPredicted RBP6.57□□□□□ -1.36
SUB1-204ENST00000504016 ADRB1P08588 477 aa6.57□□□□□ -1.36
SUB1-204ENST00000504016 SLC9A5Q14940 896 aa6.57□□□□□ -1.36
SUB1-204ENST00000504016 SPATS1Q496A3 300 aa6.57□□□□□ -1.36
SUB1-204ENST00000504016 ZFYVE27Q5T4F4 411 aa6.57□□□□□ -1.36
SUB1-204ENST00000504016 CPLX3Q8WVH0 158 aa6.57□□□□□ -1.36
SUB1-204ENST00000504016 RCC1LQ96I51 464 aaKnown RBP6.57□□□□□ -1.36
SUB1-204ENST00000504016 FBLN5Q9UBX5 448 aa6.57□□□□□ -1.36
SUB1-204ENST00000504016 TRBV23OR9-2A0A075B6M9 112 aa6.56□□□□□ -1.36
SUB1-204ENST00000504016 NPHS1O60500 1241 aa6.56□□□□□ -1.36
SUB1-204ENST00000504016 ZBTB7AO95365 584 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms