RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 RPN1P04843 607 aaKnown RBP24.07■■□□□ 1.44
UBE2D3-216ENST00000503742 GCFC2P16383 781 aaKnown RBP24.07■■□□□ 1.44
UBE2D3-216ENST00000503742 PLCG1P19174 1290 aa24.07■■□□□ 1.44
UBE2D3-216ENST00000503742 CAP2P40123 477 aa24.07■■□□□ 1.44
UBE2D3-216ENST00000503742 TXKP42681 527 aa24.07■■□□□ 1.44
UBE2D3-216ENST00000503742 MIGA2Q7L4E1 593 aa24.07■■□□□ 1.44
UBE2D3-216ENST00000503742 FBXO11Q86XK2 927 aa24.07■■□□□ 1.44
UBE2D3-216ENST00000503742 RMND1Q9NWS8 449 aa24.07■■□□□ 1.44
UBE2D3-216ENST00000503742 SERPINC1P01008 464 aa24.07■■□□□ 1.44
UBE2D3-216ENST00000503742 GSDMDP57764 484 aa24.07■■□□□ 1.44
UBE2D3-216ENST00000503742 SNAP25P60880 206 aa24.07■■□□□ 1.44
UBE2D3-216ENST00000503742 ARID5BQ14865 1188 aa24.07■■□□□ 1.44
UBE2D3-216ENST00000503742 SMYD4Q8IYR2 804 aaPredicted RBP24.07■■□□□ 1.44
UBE2D3-216ENST00000503742 SPICE1Q8N0Z3 855 aa24.07■■□□□ 1.44
UBE2D3-216ENST00000503742 GOPCQ9HD26 462 aa24.07■■□□□ 1.44
UBE2D3-216ENST00000503742 PRR12Q9ULL5 1215 aa24.07■■□□□ 1.44
UBE2D3-216ENST00000503742 IKQ13123 557 aaPredicted RBP24.06■■□□□ 1.44
UBE2D3-216ENST00000503742 PDIA5Q14554 519 aa24.06■■□□□ 1.44
UBE2D3-216ENST00000503742 ZNF658Q5TYW1 1059 aaPredicted RBP24.06■■□□□ 1.44
UBE2D3-216ENST00000503742 NAP1L5Q96NT1 182 aaPredicted RBP24.06■■□□□ 1.44
UBE2D3-216ENST00000503742 NAP1L4Q99733 375 aaKnown RBP24.06■■□□□ 1.44
UBE2D3-216ENST00000503742 AP3B2Q13367 1082 aa24.05■■□□□ 1.44
UBE2D3-216ENST00000503742 SPATA1Q5VX52 437 aa24.05■■□□□ 1.44
UBE2D3-216ENST00000503742 TMC6Q7Z403 805 aa24.05■■□□□ 1.44
UBE2D3-216ENST00000503742 PLIN2Q99541 437 aa24.05■■□□□ 1.44
UBE2D3-216ENST00000503742 ANO3Q9BYT9 981 aa24.05■■□□□ 1.44
UBE2D3-216ENST00000503742 DDX25Q9UHL0 483 aaKnown RBP24.05■■□□□ 1.44
UBE2D3-216ENST00000503742 EGFRP00533 1210 aa24.05■■□□□ 1.44
UBE2D3-216ENST00000503742 PTGER2P43116 358 aa24.05■■□□□ 1.44
UBE2D3-216ENST00000503742 USP11P51784 963 aa24.05■■□□□ 1.44
UBE2D3-216ENST00000503742 PRELPP51888 382 aa24.05■■□□□ 1.44
UBE2D3-216ENST00000503742 STAT2P52630 851 aa24.05■■□□□ 1.44
UBE2D3-216ENST00000503742 SEMA3FQ13275 785 aa24.05■■□□□ 1.44
UBE2D3-216ENST00000503742 KCNB1Q14721 858 aa24.05■■□□□ 1.44
UBE2D3-216ENST00000503742 TMEM266Q2M3C6 531 aa24.05■■□□□ 1.44
UBE2D3-216ENST00000503742 MCTP2Q6DN12 878 aa24.05■■□□□ 1.44
UBE2D3-216ENST00000503742 CRYGNQ8WXF5 182 aa24.05■■□□□ 1.44
UBE2D3-216ENST00000503742 HAS1Q92839 578 aa24.05■■□□□ 1.44
UBE2D3-216ENST00000503742 SAMSN1Q9NSI8 373 aaKnown RBP24.05■■□□□ 1.44
UBE2D3-216ENST00000503742 SYNRGQ9UMZ2 1314 aa24.05■■□□□ 1.44
UBE2D3-216ENST00000503742 KLRC4O43908 158 aa24.04■■□□□ 1.44
UBE2D3-216ENST00000503742 RASA3Q14644 834 aa24.04■■□□□ 1.44
UBE2D3-216ENST00000503742 KLHL10Q6JEL2 608 aa24.04■■□□□ 1.44
UBE2D3-216ENST00000503742 MBOAT7Q96N66 472 aa24.04■■□□□ 1.44
UBE2D3-216ENST00000503742 P2RX7Q99572 595 aaKnown RBP24.04■■□□□ 1.44
UBE2D3-216ENST00000503742 VCPKMTQ9H867 229 aa24.04■■□□□ 1.44
UBE2D3-216ENST00000503742 INTS13Q9NVM9 706 aa24.04■■□□□ 1.44
UBE2D3-216ENST00000503742 LRWD1Q9UFC0 647 aa24.04■■□□□ 1.44
UBE2D3-216ENST00000503742 CYP3A7-CYP3A51PA0A087WV96 503 aa24.03■■□□□ 1.44
UBE2D3-216ENST00000503742 FZD9O00144 591 aa24.03■■□□□ 1.44
UBE2D3-216ENST00000503742 CYP3A7P24462 503 aa24.03■■□□□ 1.44
UBE2D3-216ENST00000503742 RASSF7Q02833 373 aa24.03■■□□□ 1.44
UBE2D3-216ENST00000503742 TEPSINQ96N21 525 aa24.03■■□□□ 1.44
UBE2D3-216ENST00000503742 RAB34Q9BZG1 259 aa24.03■■□□□ 1.44
UBE2D3-216ENST00000503742 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.03■■□□□ 1.44
UBE2D3-216ENST00000503742 PLA2G6O60733 806 aa24.03■■□□□ 1.44
UBE2D3-216ENST00000503742 FAM83BQ5T0W9 1011 aa24.03■■□□□ 1.44
UBE2D3-216ENST00000503742 MOXD1Q6UVY6 613 aa24.03■■□□□ 1.44
UBE2D3-216ENST00000503742 CALML4Q96GE6 196 aa24.03■■□□□ 1.44
UBE2D3-216ENST00000503742 PHF20L1A8MW92 1017 aa24.02■■□□□ 1.44
UBE2D3-216ENST00000503742 OPLAHO14841 1288 aa24.02■■□□□ 1.44
UBE2D3-216ENST00000503742 ASNSP08243 561 aa24.02■■□□□ 1.44
UBE2D3-216ENST00000503742 GRB10Q13322 594 aa24.02■■□□□ 1.44
UBE2D3-216ENST00000503742 USH1GQ495M9 461 aa24.02■■□□□ 1.44
UBE2D3-216ENST00000503742 VSTM4Q8IW00 320 aa24.02■■□□□ 1.44
UBE2D3-216ENST00000503742 SH2D4AQ9H788 454 aa24.02■■□□□ 1.44
UBE2D3-216ENST00000503742 ATAD5Q96QE3 1844 aa24.02■■□□□ 1.44
UBE2D3-216ENST00000503742 GMPSP49915 693 aaPredicted RBP24.02■■□□□ 1.43
UBE2D3-216ENST00000503742 STX17P56962 302 aa24.02■■□□□ 1.43
UBE2D3-216ENST00000503742 CCZ1BP86790 482 aa24.02■■□□□ 1.43
UBE2D3-216ENST00000503742 CCZ1P86791 482 aaPredicted RBP24.02■■□□□ 1.43
UBE2D3-216ENST00000503742 TNFAIP1Q13829 316 aa24.02■■□□□ 1.43
UBE2D3-216ENST00000503742 HSP90AA4PQ58FG1 418 aa24.02■■□□□ 1.43
UBE2D3-216ENST00000503742 CDKAL1Q5VV42 579 aa24.02■■□□□ 1.43
UBE2D3-216ENST00000503742 PNMA5Q96PV4 448 aa24.02■■□□□ 1.43
UBE2D3-216ENST00000503742 C7orf25Q9BPX7 421 aa24.02■■□□□ 1.43
UBE2D3-216ENST00000503742 RWDD2AQ9UIY3 292 aa24.02■■□□□ 1.43
UBE2D3-216ENST00000503742 RHOBTB3O94955 611 aa24.01■■□□□ 1.43
UBE2D3-216ENST00000503742 CDK11BP21127 795 aaKnown RBP24.01■■□□□ 1.43
UBE2D3-216ENST00000503742 DHX8Q14562 1220 aaKnown RBP24.01■■□□□ 1.43
UBE2D3-216ENST00000503742 KMT5BQ4FZB7 885 aa24.01■■□□□ 1.43
UBE2D3-216ENST00000503742 CTNND2Q9UQB3 1225 aa24.01■■□□□ 1.43
UBE2D3-216ENST00000503742 POTEMA6NI47 508 aa24■■□□□ 1.43
UBE2D3-216ENST00000503742 FOSP01100 380 aaPredicted RBP24■■□□□ 1.43
UBE2D3-216ENST00000503742 ARMCX5Q6P1M9 558 aa24■■□□□ 1.43
UBE2D3-216ENST00000503742 APTXQ7Z2E3 356 aaKnown RBP24■■□□□ 1.43
UBE2D3-216ENST00000503742 TEX2Q8IWB9 1127 aa24■■□□□ 1.43
UBE2D3-216ENST00000503742 MICALL2Q8IY33 904 aa24■■□□□ 1.43
UBE2D3-216ENST00000503742 CCDC150Q8NCX0 1101 aa24■■□□□ 1.43
UBE2D3-216ENST00000503742 TRIM9Q9C026 710 aa24■■□□□ 1.43
UBE2D3-216ENST00000503742 KCNMB3Q9NPA1 279 aa24■■□□□ 1.43
UBE2D3-216ENST00000503742 STK17AQ9UEE5 414 aa24■■□□□ 1.43
UBE2D3-216ENST00000503742 SCAF8Q9UPN6 1271 aaKnown RBP24■■□□□ 1.43
UBE2D3-216ENST00000503742 GDAQ9Y2T3 454 aa24■■□□□ 1.43
UBE2D3-216ENST00000503742 SMCHD1A6NHR9 2005 aa24■■□□□ 1.43
UBE2D3-216ENST00000503742 PIK3CDO00329 1044 aa24■■□□□ 1.43
UBE2D3-216ENST00000503742 TRAF1Q13077 416 aa24■■□□□ 1.43
UBE2D3-216ENST00000503742 CHURC1Q8WUH1 139 aa24■■□□□ 1.43
UBE2D3-216ENST00000503742 GLIS2Q9BZE0 524 aaPredicted RBP24■■□□□ 1.43
UBE2D3-216ENST00000503742 RANBP17Q9H2T7 1088 aaKnown RBP24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 179.3 ms