RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 ZNF333Q96JL9 665 aa19.05■□□□□ 0.64
SCLT1-205ENST00000503401 ASTN1O14525 1302 aa19.05■□□□□ 0.64
SCLT1-205ENST00000503401 KIAA0100Q14667 2235 aaKnown RBP19.05■□□□□ 0.64
SCLT1-205ENST00000503401 SOWAHBA6NEL2 793 aa19.04■□□□□ 0.64
SCLT1-205ENST00000503401 IFNAR1P17181 557 aa19.04■□□□□ 0.64
SCLT1-205ENST00000503401 WWC2Q6AWC2 1192 aa19.04■□□□□ 0.64
SCLT1-205ENST00000503401 CD2BP2O95400 341 aaKnown RBP19.03■□□□□ 0.64
SCLT1-205ENST00000503401 PRKAR2AP13861 404 aaKnown RBP19.03■□□□□ 0.64
SCLT1-205ENST00000503401 HOXA13P31271 388 aaPredicted RBP19.03■□□□□ 0.64
SCLT1-205ENST00000503401 OLFML2BQ68BL8 750 aa19.03■□□□□ 0.64
SCLT1-205ENST00000503401 TYW1BQ6NUM6 668 aa19.03■□□□□ 0.64
SCLT1-205ENST00000503401 MCF2L2Q86YR7 1114 aa19.03■□□□□ 0.64
SCLT1-205ENST00000503401 TRMT44Q8IYL2 757 aaKnown RBP19.03■□□□□ 0.64
SCLT1-205ENST00000503401 COL20A1Q9P218 1284 aa19.03■□□□□ 0.64
SCLT1-205ENST00000503401 LIMCH1Q9UPQ0 1083 aa19.03■□□□□ 0.64
SCLT1-205ENST00000503401 DIS3Q9Y2L1 958 aaKnown RBP19.03■□□□□ 0.64
SCLT1-205ENST00000503401 PRPF3O43395 683 aaKnown RBP19.03■□□□□ 0.64
SCLT1-205ENST00000503401 CACNB2Q08289 660 aaPredicted RBP19.03■□□□□ 0.64
SCLT1-205ENST00000503401 TRAF1Q13077 416 aa19.03■□□□□ 0.64
SCLT1-205ENST00000503401 PKN1Q16512 942 aa19.03■□□□□ 0.64
SCLT1-205ENST00000503401 PRAMEF19Q5SWL8 479 aa19.03■□□□□ 0.64
SCLT1-205ENST00000503401 GTF3C6Q969F1 213 aa19.03■□□□□ 0.64
SCLT1-205ENST00000503401 TINF2Q9BSI4 451 aa19.03■□□□□ 0.64
SCLT1-205ENST00000503401 ST18O60284 1047 aa19.02■□□□□ 0.64
SCLT1-205ENST00000503401 IGHA2P01877 340 aa19.02■□□□□ 0.64
SCLT1-205ENST00000503401 UBXN2AP68543 259 aa19.02■□□□□ 0.64
SCLT1-205ENST00000503401 AKAP17AQ02040 695 aaKnown RBP19.02■□□□□ 0.64
SCLT1-205ENST00000503401 ST3GAL1Q11201 340 aa19.02■□□□□ 0.64
SCLT1-205ENST00000503401 PFKFB3Q16875 520 aaPredicted RBP19.02■□□□□ 0.64
SCLT1-205ENST00000503401 MFSD14CQ5VZR4 134 aa19.02■□□□□ 0.64
SCLT1-205ENST00000503401 RGS22Q8NE09 1264 aa19.02■□□□□ 0.64
SCLT1-205ENST00000503401 SYTL5Q8TDW5 730 aaPredicted RBP19.02■□□□□ 0.64
SCLT1-205ENST00000503401 RNF26Q9BY78 433 aaPredicted RBP19.02■□□□□ 0.64
SCLT1-205ENST00000503401 UNC93B1Q9H1C4 597 aa19.02■□□□□ 0.64
SCLT1-205ENST00000503401 CCDC85CA6NKD9 419 aa19.01■□□□□ 0.63
SCLT1-205ENST00000503401 STXBP3O00186 592 aa19.01■□□□□ 0.63
SCLT1-205ENST00000503401 CTDNEP1O95476 244 aa19.01■□□□□ 0.63
SCLT1-205ENST00000503401 SCG2P13521 617 aa19.01■□□□□ 0.63
SCLT1-205ENST00000503401 HSD17B4P51659 736 aa19.01■□□□□ 0.63
SCLT1-205ENST00000503401 SSRP1Q08945 709 aaKnown RBP19.01■□□□□ 0.63
SCLT1-205ENST00000503401 CPLX2Q6PUV4 134 aaKnown RBP19.01■□□□□ 0.63
SCLT1-205ENST00000503401 CCL5P13501 91 aa19■□□□□ 0.63
SCLT1-205ENST00000503401 CCND3P30281 292 aaPredicted RBP19■□□□□ 0.63
SCLT1-205ENST00000503401 NAPAP54920 295 aa19■□□□□ 0.63
SCLT1-205ENST00000503401 MAP3K21Q5TCX8 1036 aa19■□□□□ 0.63
SCLT1-205ENST00000503401 ARMCX2Q7L311 632 aa19■□□□□ 0.63
SCLT1-205ENST00000503401 ZNF467Q7Z7K2 595 aaPredicted RBP19■□□□□ 0.63
SCLT1-205ENST00000503401 FCHSD1Q86WN1 690 aa19■□□□□ 0.63
SCLT1-205ENST00000503401 TRIM22Q8IYM9 498 aa19■□□□□ 0.63
SCLT1-205ENST00000503401 TRPV1Q8NER1 839 aa19■□□□□ 0.63
SCLT1-205ENST00000503401 TAAR1Q96RJ0 339 aa19■□□□□ 0.63
SCLT1-205ENST00000503401 BARHL2Q9NY43 387 aa19■□□□□ 0.63
SCLT1-205ENST00000503401 GCOM1H8Y6P7 765 aaPredicted RBP19■□□□□ 0.63
SCLT1-205ENST00000503401 SNAI1O95863 264 aaPredicted RBP19■□□□□ 0.63
SCLT1-205ENST00000503401 POLR2MP0CAP2 368 aa19■□□□□ 0.63
SCLT1-205ENST00000503401 ALDH5A1P51649 535 aaPredicted RBP19■□□□□ 0.63
SCLT1-205ENST00000503401 USP17L6PQ6QN14 398 aa19■□□□□ 0.63
SCLT1-205ENST00000503401 MAMDC4Q6UXC1 1216 aa19■□□□□ 0.63
SCLT1-205ENST00000503401 CCDC83Q8IWF9 413 aa19■□□□□ 0.63
SCLT1-205ENST00000503401 AIFM3Q96NN9 605 aa19■□□□□ 0.63
SCLT1-205ENST00000503401 RNF208Q9H0X6 261 aa19■□□□□ 0.63
SCLT1-205ENST00000503401 PSTPIP2Q9H939 334 aa19■□□□□ 0.63
SCLT1-205ENST00000503401 UBE2SQ16763 222 aa18.99■□□□□ 0.63
SCLT1-205ENST00000503401 SHISA4Q96DD7 197 aa18.99■□□□□ 0.63
SCLT1-205ENST00000503401 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.99■□□□□ 0.63
SCLT1-205ENST00000503401 RBM27Q9P2N5 1060 aaKnown RBP18.99■□□□□ 0.63
SCLT1-205ENST00000503401 ADD3Q9UEY8 706 aaKnown RBP18.99■□□□□ 0.63
SCLT1-205ENST00000503401 DNAH12Q6ZR08 3092 aa18.99■□□□□ 0.63
SCLT1-205ENST00000503401 SYNGAP1Q96PV0 1343 aa18.98■□□□□ 0.63
SCLT1-205ENST00000503401 MEIS2O14770 477 aa18.98■□□□□ 0.63
SCLT1-205ENST00000503401 JAK2O60674 1132 aa18.98■□□□□ 0.63
SCLT1-205ENST00000503401 CDKL5O76039 1030 aa18.98■□□□□ 0.63
SCLT1-205ENST00000503401 CYBAP13498 195 aa18.98■□□□□ 0.63
SCLT1-205ENST00000503401 CNGA1P29973 690 aa18.98■□□□□ 0.63
SCLT1-205ENST00000503401 GHRHRQ02643 423 aa18.98■□□□□ 0.63
SCLT1-205ENST00000503401 EEPD1Q7L9B9 569 aa18.98■□□□□ 0.63
SCLT1-205ENST00000503401 RMDN3Q96TC7 470 aa18.98■□□□□ 0.63
SCLT1-205ENST00000503401 HMX1Q9NP08 348 aaPredicted RBP18.98■□□□□ 0.63
SCLT1-205ENST00000503401 VPS54Q9P1Q0 977 aa18.98■□□□□ 0.63
SCLT1-205ENST00000503401 LRRC37A2A6NM11 1700 aa18.98■□□□□ 0.63
SCLT1-205ENST00000503401 RPTORQ8N122 1335 aa18.97■□□□□ 0.63
SCLT1-205ENST00000503401 ASB14A6NK59 587 aa18.97■□□□□ 0.63
SCLT1-205ENST00000503401 DEXIO95424 95 aa18.97■□□□□ 0.63
SCLT1-205ENST00000503401 EIF2AK2P19525 551 aaKnown RBP18.97■□□□□ 0.63
SCLT1-205ENST00000503401 MSL3Q8N5Y2 521 aaKnown RBP18.97■□□□□ 0.63
SCLT1-205ENST00000503401 NSUN7Q8NE18 718 aaKnown RBP18.97■□□□□ 0.63
SCLT1-205ENST00000503401 ZSCAN31Q96LW9 406 aaPredicted RBP18.97■□□□□ 0.63
SCLT1-205ENST00000503401 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.97■□□□□ 0.63
SCLT1-205ENST00000503401 SMCO2A6NFE2 343 aa18.96■□□□□ 0.63
SCLT1-205ENST00000503401 hCG_1984214I3L0E3 225 aa18.96■□□□□ 0.63
SCLT1-205ENST00000503401 ADAMTS3O15072 1205 aa18.96■□□□□ 0.63
SCLT1-205ENST00000503401 ARHGEF16Q5VV41 709 aa18.96■□□□□ 0.63
SCLT1-205ENST00000503401 ANO1Q5XXA6 986 aa18.96■□□□□ 0.63
SCLT1-205ENST00000503401 ZNF713Q8N859 430 aaPredicted RBP18.96■□□□□ 0.63
SCLT1-205ENST00000503401 DNERQ8NFT8 737 aa18.96■□□□□ 0.63
SCLT1-205ENST00000503401 SMARCC2Q8TAQ2 1214 aa18.96■□□□□ 0.63
SCLT1-205ENST00000503401 CUL5Q93034 780 aa18.96■□□□□ 0.63
SCLT1-205ENST00000503401 PXMP2Q9NR77 195 aa18.96■□□□□ 0.63
SCLT1-205ENST00000503401 SH2B1Q9NRF2 756 aaPredicted RBP18.96■□□□□ 0.63
SCLT1-205ENST00000503401 ORC3Q9UBD5 711 aaPredicted RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms