RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 UPF3BQ9BZI7 483 aaKnown RBP21.12■□□□□ 0.97
PDLIM7-209ENST00000503346 ADD3Q9UEY8 706 aaKnown RBP21.12■□□□□ 0.97
PDLIM7-209ENST00000503346 ZNFX1Q9P2E3 1918 aaKnown RBP21.12■□□□□ 0.97
PDLIM7-209ENST00000503346 NID2Q14112 1375 aa21.11■□□□□ 0.97
PDLIM7-209ENST00000503346 GOLGA8AA7E2F4 631 aa21.11■□□□□ 0.97
PDLIM7-209ENST00000503346 GOLGA8BA8MQT2 603 aa21.11■□□□□ 0.97
PDLIM7-209ENST00000503346 OPLAHO14841 1288 aa21.11■□□□□ 0.97
PDLIM7-209ENST00000503346 CALML3P27482 149 aa21.11■□□□□ 0.97
PDLIM7-209ENST00000503346 MLLT1Q03111 559 aaPredicted RBP21.11■□□□□ 0.97
PDLIM7-209ENST00000503346 UBE2Q1Q7Z7E8 422 aa21.11■□□□□ 0.97
PDLIM7-209ENST00000503346 ANKLE1Q8NAG6 615 aa21.11■□□□□ 0.97
PDLIM7-209ENST00000503346 MORC4Q8TE76 937 aa21.11■□□□□ 0.97
PDLIM7-209ENST00000503346 TBC1D5Q92609 795 aa21.11■□□□□ 0.97
PDLIM7-209ENST00000503346 ABHD16BQ9H3Z7 469 aa21.11■□□□□ 0.97
PDLIM7-209ENST00000503346 FAM217BQ9NTX9 383 aaPredicted RBP21.11■□□□□ 0.97
PDLIM7-209ENST00000503346 ALDH5A1P51649 535 aaPredicted RBP21.1■□□□□ 0.97
PDLIM7-209ENST00000503346 FUT2Q10981 343 aa21.1■□□□□ 0.97
PDLIM7-209ENST00000503346 ACVR2BQ13705 512 aa21.1■□□□□ 0.97
PDLIM7-209ENST00000503346 TOB2Q14106 344 aaPredicted RBP21.1■□□□□ 0.97
PDLIM7-209ENST00000503346 SAMD3Q8N6K7 520 aa21.1■□□□□ 0.97
PDLIM7-209ENST00000503346 DNERQ8NFT8 737 aa21.1■□□□□ 0.97
PDLIM7-209ENST00000503346 PIBF1Q8WXW3 757 aa21.1■□□□□ 0.97
PDLIM7-209ENST00000503346 KATNBL1Q9H079 304 aa21.1■□□□□ 0.97
PDLIM7-209ENST00000503346 SEC63Q9UGP8 760 aaKnown RBP21.1■□□□□ 0.97
PDLIM7-209ENST00000503346 GTF3C3Q9Y5Q9 886 aa21.1■□□□□ 0.97
PDLIM7-209ENST00000503346 PLXNA1Q9UIW2 1896 aa21.09■□□□□ 0.97
PDLIM7-209ENST00000503346 SMCHD1A6NHR9 2005 aa21.09■□□□□ 0.97
PDLIM7-209ENST00000503346 CCDC196A0A1B0GTZ2 297 aa21.09■□□□□ 0.97
PDLIM7-209ENST00000503346 CDC27P30260 824 aa21.09■□□□□ 0.97
PDLIM7-209ENST00000503346 METAP2P50579 478 aaKnown RBP eCLIP21.09■□□□□ 0.97
PDLIM7-209ENST00000503346 HSD17B4P51659 736 aa21.09■□□□□ 0.97
PDLIM7-209ENST00000503346 SYTL5Q8TDW5 730 aaPredicted RBP21.09■□□□□ 0.97
PDLIM7-209ENST00000503346 PDRG1Q9NUG6 133 aa21.09■□□□□ 0.97
PDLIM7-209ENST00000503346 MAP3K20Q9NYL2 800 aaKnown RBP21.09■□□□□ 0.97
PDLIM7-209ENST00000503346 ZHX1Q9UKY1 873 aaPredicted RBP21.09■□□□□ 0.97
PDLIM7-209ENST00000503346 NAP1L2Q9ULW6 460 aaPredicted RBP21.09■□□□□ 0.97
PDLIM7-209ENST00000503346 CNTNAP5Q8WYK1 1306 aa21.08■□□□□ 0.97
PDLIM7-209ENST00000503346 FARP2O94887 1054 aaPredicted RBP21.08■□□□□ 0.97
PDLIM7-209ENST00000503346 AKR1A1P14550 325 aa21.08■□□□□ 0.97
PDLIM7-209ENST00000503346 CCDC82Q8N4S0 544 aa21.08■□□□□ 0.97
PDLIM7-209ENST00000503346 CFBP00751 764 aa21.07■□□□□ 0.96
PDLIM7-209ENST00000503346 EDNRBP24530 442 aa21.07■□□□□ 0.96
PDLIM7-209ENST00000503346 PDIA3P30101 505 aaKnown RBP21.07■□□□□ 0.96
PDLIM7-209ENST00000503346 ADD1P35611 737 aaKnown RBP21.07■□□□□ 0.96
PDLIM7-209ENST00000503346 MNX1P50219 401 aaPredicted RBP21.07■□□□□ 0.96
PDLIM7-209ENST00000503346 ALDH8A1Q9H2A2 487 aaPredicted RBP21.07■□□□□ 0.96
PDLIM7-209ENST00000503346 COL20A1Q9P218 1284 aa21.07■□□□□ 0.96
PDLIM7-209ENST00000503346 FAM184BQ9ULE4 1060 aa21.07■□□□□ 0.96
PDLIM7-209ENST00000503346 TAAR1Q96RJ0 339 aa21.06■□□□□ 0.96
PDLIM7-209ENST00000503346 MPHOSPH6Q99547 160 aaKnown RBP21.06■□□□□ 0.96
PDLIM7-209ENST00000503346 DDX49Q9Y6V7 483 aaKnown RBP21.06■□□□□ 0.96
PDLIM7-209ENST00000503346 hCG_1642624A0A1W2PR95 340 aa21.05■□□□□ 0.96
PDLIM7-209ENST00000503346 B4DLN1 442 aa21.05■□□□□ 0.96
PDLIM7-209ENST00000503346 GCOM1H8Y6P7 765 aaPredicted RBP21.05■□□□□ 0.96
PDLIM7-209ENST00000503346 POLR2MP0CAP2 368 aa21.05■□□□□ 0.96
PDLIM7-209ENST00000503346 RARBP10826 455 aa21.05■□□□□ 0.96
PDLIM7-209ENST00000503346 MRPL12P52815 198 aaKnown RBP21.05■□□□□ 0.96
PDLIM7-209ENST00000503346 ANO1Q5XXA6 986 aa21.05■□□□□ 0.96
PDLIM7-209ENST00000503346 ZNF274Q96GC6 653 aaPredicted RBP21.05■□□□□ 0.96
PDLIM7-209ENST00000503346 VTA1Q9NP79 307 aa21.05■□□□□ 0.96
PDLIM7-209ENST00000503346 CCDC144BQ3MJ40 725 aa21.04■□□□□ 0.96
PDLIM7-209ENST00000503346 NECAB2Q7Z6G3 386 aa21.04■□□□□ 0.96
PDLIM7-209ENST00000503346 FBXO16Q8IX29 292 aaPredicted RBP21.04■□□□□ 0.96
PDLIM7-209ENST00000503346 NSUN6Q8TEA1 469 aaKnown RBP21.04■□□□□ 0.96
PDLIM7-209ENST00000503346 DIS3LQ8TF46 1054 aaKnown RBP21.04■□□□□ 0.96
PDLIM7-209ENST00000503346 PAWRQ96IZ0 340 aaKnown RBP21.04■□□□□ 0.96
PDLIM7-209ENST00000503346 RMDN3Q96TC7 470 aa21.04■□□□□ 0.96
PDLIM7-209ENST00000503346 V9GY48 417 aaPredicted RBP21.04■□□□□ 0.96
PDLIM7-209ENST00000503346 LCTP09848 1927 aa21.04■□□□□ 0.96
PDLIM7-209ENST00000503346 DUSP11O75319 330 aaKnown RBP21.03■□□□□ 0.96
PDLIM7-209ENST00000503346 TAPT1Q6NXT6 567 aa21.03■□□□□ 0.96
PDLIM7-209ENST00000503346 ARRDC4Q8NCT1 418 aa21.03■□□□□ 0.96
PDLIM7-209ENST00000503346 IWS1Q96ST2 819 aa21.03■□□□□ 0.96
PDLIM7-209ENST00000503346 XPNPEP3Q9NQH7 507 aa21.03■□□□□ 0.96
PDLIM7-209ENST00000503346 BAZ2BQ9UIF8 2168 aaKnown RBP21.03■□□□□ 0.96
PDLIM7-209ENST00000503346 MKI67P46013 3256 aaKnown RBP21.03■□□□□ 0.96
PDLIM7-209ENST00000503346 hCG_1984214I3L0E3 225 aa21.02■□□□□ 0.96
PDLIM7-209ENST00000503346 PIK3CDO00329 1044 aa21.02■□□□□ 0.96
PDLIM7-209ENST00000503346 DNM1LO00429 736 aa21.02■□□□□ 0.96
PDLIM7-209ENST00000503346 HOXA13P31271 388 aaPredicted RBP21.02■□□□□ 0.96
PDLIM7-209ENST00000503346 PDE4DQ08499 809 aa21.02■□□□□ 0.96
PDLIM7-209ENST00000503346 ANKRD1Q15327 319 aa21.02■□□□□ 0.96
PDLIM7-209ENST00000503346 NTRK3Q16288 839 aa21.02■□□□□ 0.96
PDLIM7-209ENST00000503346 ARHGEF16Q5VV41 709 aa21.02■□□□□ 0.96
PDLIM7-209ENST00000503346 EEPD1Q7L9B9 569 aa21.02■□□□□ 0.96
PDLIM7-209ENST00000503346 ZNF713Q8N859 430 aaPredicted RBP21.02■□□□□ 0.96
PDLIM7-209ENST00000503346 PXMP2Q9NR77 195 aa21.02■□□□□ 0.96
PDLIM7-209ENST00000503346 ADCY6O43306 1168 aa21.01■□□□□ 0.95
PDLIM7-209ENST00000503346 COL6A1P12109 1028 aa21.01■□□□□ 0.95
PDLIM7-209ENST00000503346 IFNAR1P17181 557 aa21.01■□□□□ 0.95
PDLIM7-209ENST00000503346 ADCYAP1R1P41586 468 aa21.01■□□□□ 0.95
PDLIM7-209ENST00000503346 CCT2P78371 535 aaKnown RBP21.01■□□□□ 0.95
PDLIM7-209ENST00000503346 WWC2Q6AWC2 1192 aa21.01■□□□□ 0.95
PDLIM7-209ENST00000503346 IQSEC1Q6DN90 963 aa21.01■□□□□ 0.95
PDLIM7-209ENST00000503346 HEATR3Q7Z4Q2 680 aa21.01■□□□□ 0.95
PDLIM7-209ENST00000503346 GPKOWQ92917 476 aaPredicted RBP eCLIP21.01■□□□□ 0.95
PDLIM7-209ENST00000503346 LENG1Q96BZ8 264 aaPredicted RBP21.01■□□□□ 0.95
PDLIM7-209ENST00000503346 LARP6Q9BRS8 491 aaKnown RBP21.01■□□□□ 0.95
PDLIM7-209ENST00000503346 C11orf49Q9H6J7 331 aa21.01■□□□□ 0.95
PDLIM7-209ENST00000503346 NCOA5Q9HCD5 579 aaKnown RBP21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms