RNA–Protein interactions for RNA: ENST00000503084.1

TNPO1-202, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 623 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-202ENST00000503084 TBX10O75333 385 aa13.83□□□□□ -0.2
TNPO1-202ENST00000503084 IDH1O75874 414 aaKnown RBP13.83□□□□□ -0.2
TNPO1-202ENST00000503084 CYP2D6P10635 497 aa13.83□□□□□ -0.2
TNPO1-202ENST00000503084 SIGLEC14Q08ET2 396 aa13.83□□□□□ -0.2
TNPO1-202ENST00000503084 BFSP2Q13515 415 aa13.83□□□□□ -0.2
TNPO1-202ENST00000503084 EPC2Q52LR7 807 aa13.83□□□□□ -0.2
TNPO1-202ENST00000503084 DGLUCYQ7Z3D6 616 aa13.83□□□□□ -0.2
TNPO1-202ENST00000503084 FBXO16Q8IX29 292 aaPredicted RBP13.83□□□□□ -0.2
TNPO1-202ENST00000503084 CPXCR1Q8N123 301 aa13.83□□□□□ -0.2
TNPO1-202ENST00000503084 RMDN1Q96DB5 314 aa13.83□□□□□ -0.2
TNPO1-202ENST00000503084 NUP88Q99567 741 aaPredicted RBP13.83□□□□□ -0.2
TNPO1-202ENST00000503084 SLF1Q9BQI6 1058 aa13.83□□□□□ -0.2
TNPO1-202ENST00000503084 FRYLO94915 3013 aa13.82□□□□□ -0.2
TNPO1-202ENST00000503084 ANKRD11Q6UB99 2663 aaPredicted RBP13.82□□□□□ -0.2
TNPO1-202ENST00000503084 TRIP12Q14669 1992 aaPredicted RBP13.82□□□□□ -0.2
TNPO1-202ENST00000503084 ATP2A1O14983 1001 aa13.82□□□□□ -0.2
TNPO1-202ENST00000503084 SRGAP3O43295 1099 aa13.82□□□□□ -0.2
TNPO1-202ENST00000503084 RAD21O60216 631 aa13.82□□□□□ -0.2
TNPO1-202ENST00000503084 CTC1Q2NKJ3 1217 aa13.82□□□□□ -0.2
TNPO1-202ENST00000503084 LRRFIP1Q32MZ4 808 aaKnown RBP13.82□□□□□ -0.2
TNPO1-202ENST00000503084 NBPF20Q3BBV1 942 aa13.82□□□□□ -0.2
TNPO1-202ENST00000503084 CNKSR3Q6P9H4 555 aa13.82□□□□□ -0.2
TNPO1-202ENST00000503084 FRMD5Q7Z6J6 570 aa13.82□□□□□ -0.2
TNPO1-202ENST00000503084 FAM133AQ8N9E0 248 aa13.82□□□□□ -0.2
TNPO1-202ENST00000503084 DYNLL2Q96FJ2 89 aa13.82□□□□□ -0.2
TNPO1-202ENST00000503084 MYL3P08590 195 aa13.81□□□□□ -0.2
TNPO1-202ENST00000503084 EEF2P13639 858 aaKnown RBP13.81□□□□□ -0.2
TNPO1-202ENST00000503084 GPM6BQ13491 265 aa13.81□□□□□ -0.2
TNPO1-202ENST00000503084 TAPT1Q6NXT6 567 aa13.81□□□□□ -0.2
TNPO1-202ENST00000503084 EEPD1Q7L9B9 569 aa13.81□□□□□ -0.2
TNPO1-202ENST00000503084 NKD2Q969F2 451 aaPredicted RBP13.81□□□□□ -0.2
TNPO1-202ENST00000503084 DBNDD2Q9BQY9 259 aa13.81□□□□□ -0.2
TNPO1-202ENST00000503084 RIOK1Q9BRS2 568 aaKnown RBP13.81□□□□□ -0.2
TNPO1-202ENST00000503084 RAVER2Q9HCJ3 691 aaKnown RBP13.81□□□□□ -0.2
TNPO1-202ENST00000503084 GOPCQ9HD26 462 aa13.81□□□□□ -0.2
TNPO1-202ENST00000503084 POLR3EQ9NVU0 708 aa13.81□□□□□ -0.2
TNPO1-202ENST00000503084 MCM9Q9NXL9 1143 aa13.81□□□□□ -0.2
TNPO1-202ENST00000503084 Q9Y3F1 56 aa13.81□□□□□ -0.2
TNPO1-202ENST00000503084 MICAL3Q7RTP6 2002 aa13.8□□□□□ -0.2
TNPO1-202ENST00000503084 H3BNC9 293 aa13.8□□□□□ -0.2
TNPO1-202ENST00000503084 IGSF3O75054 1194 aa13.8□□□□□ -0.2
TNPO1-202ENST00000503084 PDGFBP01127 241 aaPredicted RBP13.8□□□□□ -0.2
TNPO1-202ENST00000503084 MKRN4PQ13434 485 aaPredicted RBP13.8□□□□□ -0.2
TNPO1-202ENST00000503084 CCDC184Q52MB2 194 aa13.8□□□□□ -0.2
TNPO1-202ENST00000503084 SP7Q8TDD2 431 aaPredicted RBP13.8□□□□□ -0.2
TNPO1-202ENST00000503084 AFAP1L1Q8TED9 768 aa13.8□□□□□ -0.2
TNPO1-202ENST00000503084 SSH1Q8WYL5 1049 aa13.8□□□□□ -0.2
TNPO1-202ENST00000503084 MEIS3Q99687 375 aa13.8□□□□□ -0.2
TNPO1-202ENST00000503084 MTG1Q9BT17 334 aaPredicted RBP13.8□□□□□ -0.2
TNPO1-202ENST00000503084 HOMER2Q9NSB8 354 aa13.8□□□□□ -0.2
TNPO1-202ENST00000503084 SWAP70Q9UH65 585 aa13.8□□□□□ -0.2
TNPO1-202ENST00000503084 FBXO40Q9UH90 709 aa13.8□□□□□ -0.2
TNPO1-202ENST00000503084 CD207Q9UJ71 328 aa13.8□□□□□ -0.2
TNPO1-202ENST00000503084 NOD1Q9Y239 953 aa13.8□□□□□ -0.2
TNPO1-202ENST00000503084 INSL6Q9Y581 213 aa13.8□□□□□ -0.2
TNPO1-202ENST00000503084 ABHD14A-ACY1A0A1B0GW23 586 aa13.79□□□□□ -0.2
TNPO1-202ENST00000503084 LOC730098B7Z3J9 87 aa13.79□□□□□ -0.2
TNPO1-202ENST00000503084 NBNO60934 754 aa13.79□□□□□ -0.2
TNPO1-202ENST00000503084 CXCL10P02778 98 aa13.79□□□□□ -0.2
TNPO1-202ENST00000503084 NUBP1P53384 320 aa13.79□□□□□ -0.2
TNPO1-202ENST00000503084 HYAL1Q12794 435 aa13.79□□□□□ -0.2
TNPO1-202ENST00000503084 IQSEC1Q6DN90 963 aa13.79□□□□□ -0.2
TNPO1-202ENST00000503084 NFRKBQ6P4R8 1299 aa13.79□□□□□ -0.2
TNPO1-202ENST00000503084 LRRC8DQ7L1W4 858 aa13.79□□□□□ -0.2
TNPO1-202ENST00000503084 CHST13Q8NET6 341 aa13.79□□□□□ -0.2
TNPO1-202ENST00000503084 NLRC5Q86WI3 1866 aa13.78□□□□□ -0.2
TNPO1-202ENST00000503084 ASB14A6NK59 587 aa13.78□□□□□ -0.2
TNPO1-202ENST00000503084 NCK2O43639 380 aa13.78□□□□□ -0.2
TNPO1-202ENST00000503084 SELPP16109 830 aa13.78□□□□□ -0.2
TNPO1-202ENST00000503084 GTF2F1P35269 517 aaKnown RBP eCLIP13.78□□□□□ -0.23e-6■■■■□ 22.6
TNPO1-202ENST00000503084 CBX2Q14781 532 aaPredicted RBP13.78□□□□□ -0.2
TNPO1-202ENST00000503084 CCDC158Q5M9N0 1113 aa13.78□□□□□ -0.2
TNPO1-202ENST00000503084 CAGE1Q8TC20 777 aa13.78□□□□□ -0.2
TNPO1-202ENST00000503084 SAMD11Q96NU1 681 aa13.78□□□□□ -0.2
TNPO1-202ENST00000503084 CTAGE1Q96RT6 745 aa13.78□□□□□ -0.2
TNPO1-202ENST00000503084 A1CFQ9NQ94 594 aaKnown RBP13.78□□□□□ -0.2
TNPO1-202ENST00000503084 LINC01565O15544 149 aa13.77□□□□□ -0.21
TNPO1-202ENST00000503084 EFCAB14O75071 495 aa13.77□□□□□ -0.21
TNPO1-202ENST00000503084 LCTP09848 1927 aa13.77□□□□□ -0.21
TNPO1-202ENST00000503084 HTRA4P83105 476 aaPredicted RBP13.77□□□□□ -0.21
TNPO1-202ENST00000503084 MTX1Q13505 466 aa13.77□□□□□ -0.21
TNPO1-202ENST00000503084 DUSP28Q4G0W2 176 aa13.77□□□□□ -0.21
TNPO1-202ENST00000503084 FAM208BQ5VWN6 2430 aa13.77□□□□□ -0.21
TNPO1-202ENST00000503084 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.77□□□□□ -0.21
TNPO1-202ENST00000503084 FBXO11Q86XK2 927 aa13.77□□□□□ -0.21
TNPO1-202ENST00000503084 CCDC155Q8N6L0 562 aa13.77□□□□□ -0.21
TNPO1-202ENST00000503084 DHX38Q92620 1227 aaKnown RBP13.77□□□□□ -0.21
TNPO1-202ENST00000503084 SLC38A10Q9HBR0 1119 aa13.77□□□□□ -0.21
TNPO1-202ENST00000503084 CTDP1Q9Y5B0 961 aaPredicted RBP13.77□□□□□ -0.21
TNPO1-202ENST00000503084 FASNP49327 2511 aaKnown RBP13.77□□□□□ -0.21
TNPO1-202ENST00000503084 ZBED4O75132 1171 aa13.76□□□□□ -0.21
TNPO1-202ENST00000503084 CPT1AP50416 773 aa13.76□□□□□ -0.21
TNPO1-202ENST00000503084 TNNI3KQ59H18 835 aa13.76□□□□□ -0.21
TNPO1-202ENST00000503084 MCTP2Q6DN12 878 aa13.76□□□□□ -0.21
TNPO1-202ENST00000503084 KIAA1211Q6ZU35 1233 aa13.76□□□□□ -0.21
TNPO1-202ENST00000503084 TMEM192Q8IY95 271 aa13.76□□□□□ -0.21
TNPO1-202ENST00000503084 MYOCDQ8IZQ8 938 aa13.76□□□□□ -0.21
TNPO1-202ENST00000503084 PRPF38AQ8NAV1 312 aaKnown RBP13.76□□□□□ -0.21
TNPO1-202ENST00000503084 SDR42E1Q8WUS8 393 aa13.76□□□□□ -0.21
TNPO1-202ENST00000503084 KIFC2Q96AC6 838 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms