RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 KLRK1P26718 216 aa27.3■■□□□ 1.96
DDX41-202ENST00000503078 SIK1P57059 783 aa27.3■■□□□ 1.96
DDX41-202ENST00000503078 ITPK1Q13572 414 aa27.3■■□□□ 1.96
DDX41-202ENST00000503078 CREG2Q8IUH2 290 aa27.3■■□□□ 1.96
DDX41-202ENST00000503078 AENQ8WTP8 325 aaKnown RBP27.3■■□□□ 1.96
DDX41-202ENST00000503078 BARHL2Q9NY43 387 aa27.3■■□□□ 1.96
DDX41-202ENST00000503078 STXBP3O00186 592 aa27.29■■□□□ 1.96
DDX41-202ENST00000503078 USO1O60763 962 aaKnown RBP27.29■■□□□ 1.96
DDX41-202ENST00000503078 PRDX5P30044 214 aa27.29■■□□□ 1.96
DDX41-202ENST00000503078 ASIC1P78348 528 aa27.29■■□□□ 1.96
DDX41-202ENST00000503078 CCDC96Q2M329 555 aa27.29■■□□□ 1.96
DDX41-202ENST00000503078 AMOTL1Q8IY63 956 aa27.29■■□□□ 1.96
DDX41-202ENST00000503078 CASZ1Q86V15 1759 aa27.29■■□□□ 1.96
DDX41-202ENST00000503078 MYH14Q7Z406 1995 aaKnown RBP27.29■■□□□ 1.96
DDX41-202ENST00000503078 A0A0G2JS52 829 aa27.29■■□□□ 1.96
DDX41-202ENST00000503078 TACC1O75410 805 aa27.28■■□□□ 1.96
DDX41-202ENST00000503078 USP17L8P0C7I0 530 aa27.28■■□□□ 1.96
DDX41-202ENST00000503078 HNRNPH3P31942 346 aaKnown RBP27.28■■□□□ 1.96
DDX41-202ENST00000503078 NT5C2P49902 561 aa27.28■■□□□ 1.96
DDX41-202ENST00000503078 ITIH3Q06033 890 aa27.28■■□□□ 1.96
DDX41-202ENST00000503078 TXNRD1Q16881 649 aa27.28■■□□□ 1.96
DDX41-202ENST00000503078 SLC35G1Q2M3R5 365 aa27.28■■□□□ 1.96
DDX41-202ENST00000503078 ZNF572Q7Z3I7 529 aaPredicted RBP27.28■■□□□ 1.96
DDX41-202ENST00000503078 KRT26Q7Z3Y9 468 aa27.28■■□□□ 1.96
DDX41-202ENST00000503078 PLAGL2Q9UPG8 496 aa27.28■■□□□ 1.96
DDX41-202ENST00000503078 GOLGA6BA6NDN3 693 aa27.28■■□□□ 1.96
DDX41-202ENST00000503078 CYTH3O43739 400 aa27.28■■□□□ 1.96
DDX41-202ENST00000503078 FCER1AP12319 257 aa27.28■■□□□ 1.96
DDX41-202ENST00000503078 CORO7P57737 925 aa27.28■■□□□ 1.96
DDX41-202ENST00000503078 SLC4A8Q2Y0W8 1093 aa27.28■■□□□ 1.96
DDX41-202ENST00000503078 RUBCNQ92622 972 aa27.28■■□□□ 1.96
DDX41-202ENST00000503078 CELF1Q92879 486 aaKnown RBP27.28■■□□□ 1.96
DDX41-202ENST00000503078 SHOX2O60902 331 aaPredicted RBP27.27■■□□□ 1.96
DDX41-202ENST00000503078 OR52Z1P0C646 297 aa27.27■■□□□ 1.96
DDX41-202ENST00000503078 PRLRP16471 622 aa27.27■■□□□ 1.96
DDX41-202ENST00000503078 MARCH10Q8NA82 808 aaPredicted RBP27.27■■□□□ 1.96
DDX41-202ENST00000503078 FAM76AQ8TAV0 307 aa27.27■■□□□ 1.96
DDX41-202ENST00000503078 IFIH1Q9BYX4 1025 aaKnown RBP27.27■■□□□ 1.96
DDX41-202ENST00000503078 SH2D4AQ9H788 454 aa27.27■■□□□ 1.96
DDX41-202ENST00000503078 PLEKP08567 350 aaPredicted RBP27.27■■□□□ 1.96
DDX41-202ENST00000503078 COBLL1Q53SF7 1204 aa27.27■■□□□ 1.96
DDX41-202ENST00000503078 SMCR8Q8TEV9 937 aaPredicted RBP27.27■■□□□ 1.96
DDX41-202ENST00000503078 PLEKHA4Q9H4M7 779 aa27.27■■□□□ 1.96
DDX41-202ENST00000503078 PCDHA13Q9Y5I0 950 aa27.27■■□□□ 1.96
DDX41-202ENST00000503078 CAPN6Q9Y6Q1 641 aa27.27■■□□□ 1.96
DDX41-202ENST00000503078 HIBADHP31937 336 aaKnown RBP27.26■■□□□ 1.95
DDX41-202ENST00000503078 AMPD3Q01432 767 aa27.26■■□□□ 1.95
DDX41-202ENST00000503078 MAPK8IP2Q13387 824 aaPredicted RBP27.26■■□□□ 1.95
DDX41-202ENST00000503078 CNNM4Q6P4Q7 775 aa27.26■■□□□ 1.95
DDX41-202ENST00000503078 EFCC1Q9HA90 598 aa27.26■■□□□ 1.95
DDX41-202ENST00000503078 SPATA31A5Q5VU36 1347 aa27.26■■□□□ 1.95
DDX41-202ENST00000503078 SPATA31A7Q8IWB4 1347 aa27.26■■□□□ 1.95
DDX41-202ENST00000503078 C12orf60Q5U649 245 aa27.26■■□□□ 1.95
DDX41-202ENST00000503078 ARHGAP20Q9P2F6 1191 aa27.26■■□□□ 1.95
DDX41-202ENST00000503078 MAST2Q6P0Q8 1798 aa27.25■■□□□ 1.95
DDX41-202ENST00000503078 GOLGA6CA6NDK9 693 aa27.25■■□□□ 1.95
DDX41-202ENST00000503078 NKRFO15226 690 aaKnown RBP eCLIP27.25■■□□□ 1.95
DDX41-202ENST00000503078 GOLGA6DP0CG33 693 aa27.25■■□□□ 1.95
DDX41-202ENST00000503078 GOLGA6AQ9NYA3 693 aa27.25■■□□□ 1.95
DDX41-202ENST00000503078 TFCP2L1Q9NZI6 479 aa27.25■■□□□ 1.95
DDX41-202ENST00000503078 CLEC4GQ6UXB4 293 aa27.24■■□□□ 1.95
DDX41-202ENST00000503078 C2CD5Q86YS7 1000 aa27.24■■□□□ 1.95
DDX41-202ENST00000503078 ACSBG1Q96GR2 724 aa27.24■■□□□ 1.95
DDX41-202ENST00000503078 LRRC1Q9BTT6 524 aa27.24■■□□□ 1.95
DDX41-202ENST00000503078 SEMA6BQ9H3T3 888 aa27.24■■□□□ 1.95
DDX41-202ENST00000503078 DNAJC21Q5F1R6 531 aaKnown RBP27.24■■□□□ 1.95
DDX41-202ENST00000503078 KIAA0895Q8NCT3 520 aa27.24■■□□□ 1.95
DDX41-202ENST00000503078 SPATA4Q8NEY3 305 aa27.24■■□□□ 1.95
DDX41-202ENST00000503078 MLXIPQ9HAP2 919 aa27.24■■□□□ 1.95
DDX41-202ENST00000503078 CCNT1O60563 726 aaKnown RBP27.23■■□□□ 1.95
DDX41-202ENST00000503078 LCA5LO95447 670 aa27.23■■□□□ 1.95
DDX41-202ENST00000503078 KIF11P52732 1056 aa27.23■■□□□ 1.95
DDX41-202ENST00000503078 EZH2Q15910 746 aaKnown RBP27.23■■□□□ 1.95
DDX41-202ENST00000503078 LETM2Q2VYF4 491 aa27.23■■□□□ 1.95
DDX41-202ENST00000503078 VWA3BQ502W6 1294 aa27.23■■□□□ 1.95
DDX41-202ENST00000503078 CENPPQ6IPU0 288 aa27.23■■□□□ 1.95
DDX41-202ENST00000503078 SND1Q7KZF4 910 aaKnown RBP eCLIP27.23■■□□□ 1.95
DDX41-202ENST00000503078 DYNLL2Q96FJ2 89 aa27.23■■□□□ 1.95
DDX41-202ENST00000503078 SIK3Q9Y2K2 1263 aa27.23■■□□□ 1.95
DDX41-202ENST00000503078 CCDC88AQ3V6T2 1871 aa27.23■■□□□ 1.95
DDX41-202ENST00000503078 USP17L3A6NCW0 530 aa27.23■■□□□ 1.95
DDX41-202ENST00000503078 USP17L4A6NCW7 530 aa27.23■■□□□ 1.95
DDX41-202ENST00000503078 MOCS3O95396 460 aa27.23■■□□□ 1.95
DDX41-202ENST00000503078 USP17L1Q7RTZ2 530 aa27.23■■□□□ 1.95
DDX41-202ENST00000503078 KRT25Q7Z3Z0 450 aa27.23■■□□□ 1.95
DDX41-202ENST00000503078 HDAC7Q8WUI4 952 aa27.23■■□□□ 1.95
DDX41-202ENST00000503078 ZMYND12Q9H0C1 365 aa27.23■■□□□ 1.95
DDX41-202ENST00000503078 MKNK2Q9HBH9 465 aa27.23■■□□□ 1.95
DDX41-202ENST00000503078 DMGDHQ9UI17 866 aaKnown RBP27.23■■□□□ 1.95
DDX41-202ENST00000503078 PALM3A6NDB9 673 aaPredicted RBP27.22■■□□□ 1.95
DDX41-202ENST00000503078 TCP1P17987 556 aaKnown RBP27.22■■□□□ 1.95
DDX41-202ENST00000503078 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.22■■□□□ 1.95
DDX41-202ENST00000503078 OSBPL9Q96SU4 736 aa27.22■■□□□ 1.95
DDX41-202ENST00000503078 NONOQ15233 471 aaKnown RBP eCLIP27.22■■□□□ 1.95
DDX41-202ENST00000503078 DRC1Q96MC2 740 aa27.22■■□□□ 1.95
DDX41-202ENST00000503078 ALS2CR12Q96Q35 445 aa27.22■■□□□ 1.95
DDX41-202ENST00000503078 HINFPQ9BQA5 517 aa27.22■■□□□ 1.95
DDX41-202ENST00000503078 NDST4Q9H3R1 872 aa27.22■■□□□ 1.95
DDX41-202ENST00000503078 DEF6Q9H4E7 631 aa27.22■■□□□ 1.95
DDX41-202ENST00000503078 HYOU1Q9Y4L1 999 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms