RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 ICA1Q05084 483 aa6.08□□□□□ -1.44
HTT-202ENST00000502820 DMTNQ08495 405 aa6.08□□□□□ -1.44
HTT-202ENST00000502820 G3BP1Q13283 466 aaKnown RBP eCLIP6.08□□□□□ -1.44
HTT-202ENST00000502820 TNNI3KQ59H18 835 aa6.08□□□□□ -1.44
HTT-202ENST00000502820 FAM83BQ5T0W9 1011 aa6.08□□□□□ -1.44
HTT-202ENST00000502820 CEP85Q6P2H3 762 aa6.08□□□□□ -1.44
HTT-202ENST00000502820 SASS6Q6UVJ0 657 aa6.08□□□□□ -1.44
HTT-202ENST00000502820 ARMCX2Q7L311 632 aa6.08□□□□□ -1.44
HTT-202ENST00000502820 STK11IPQ8N1F8 1099 aa6.08□□□□□ -1.44
HTT-202ENST00000502820 PANK1Q8TE04 598 aa6.08□□□□□ -1.44
HTT-202ENST00000502820 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.08□□□□□ -1.44
HTT-202ENST00000502820 FSD1Q9BTV5 496 aa6.08□□□□□ -1.44
HTT-202ENST00000502820 CCDC94Q9BW85 323 aaPredicted RBP6.08□□□□□ -1.44
HTT-202ENST00000502820 ALDH8A1Q9H2A2 487 aaPredicted RBP6.08□□□□□ -1.44
HTT-202ENST00000502820 SLKQ9H2G2 1235 aaPredicted RBP6.08□□□□□ -1.44
HTT-202ENST00000502820 CHMP4BQ9H444 224 aaKnown RBP6.08□□□□□ -1.44
HTT-202ENST00000502820 C1orf115Q9H7X2 142 aa6.08□□□□□ -1.44
HTT-202ENST00000502820 RAVER2Q9HCJ3 691 aaKnown RBP6.08□□□□□ -1.44
HTT-202ENST00000502820 MCM9Q9NXL9 1143 aa6.08□□□□□ -1.44
HTT-202ENST00000502820 PRKAG3Q9UGI9 489 aa6.08□□□□□ -1.44
HTT-202ENST00000502820 CTNNA3Q9UI47 895 aa6.08□□□□□ -1.44
HTT-202ENST00000502820 FPGT-TNNI3KV9GXZ4 949 aa6.08□□□□□ -1.44
HTT-202ENST00000502820 FRMPD3Q5JV73 1810 aa6.08□□□□□ -1.44
HTT-202ENST00000502820 PTPRFP10586 1907 aa6.07□□□□□ -1.44
HTT-202ENST00000502820 REV3LO60673 3130 aa6.07□□□□□ -1.44
HTT-202ENST00000502820 LINC01553A4QN01 128 aa6.07□□□□□ -1.44
HTT-202ENST00000502820 PRR23AA6NEV1 266 aa6.07□□□□□ -1.44
HTT-202ENST00000502820 VWA5AO00534 786 aa6.07□□□□□ -1.44
HTT-202ENST00000502820 SURF6O75683 361 aaKnown RBP6.07□□□□□ -1.44
HTT-202ENST00000502820 UPP2O95045 317 aa6.07□□□□□ -1.44
HTT-202ENST00000502820 UQCRFS1P1P0C7P4 283 aa6.07□□□□□ -1.44
HTT-202ENST00000502820 SP100P23497 879 aaPredicted RBP6.07□□□□□ -1.44
HTT-202ENST00000502820 AVPR2P30518 371 aa6.07□□□□□ -1.44
HTT-202ENST00000502820 SHMT1P34896 483 aa6.07□□□□□ -1.44
HTT-202ENST00000502820 WDR5P61964 334 aaKnown RBP6.07□□□□□ -1.44
HTT-202ENST00000502820 RBM10P98175 930 aaKnown RBP6.07□□□□□ -1.44
HTT-202ENST00000502820 EVX2Q03828 476 aa6.07□□□□□ -1.44
HTT-202ENST00000502820 OS9Q13438 667 aaPredicted RBP6.07□□□□□ -1.44
HTT-202ENST00000502820 GPM6BQ13491 265 aa6.07□□□□□ -1.44
HTT-202ENST00000502820 PKN1Q16512 942 aa6.07□□□□□ -1.44
HTT-202ENST00000502820 NBPF20Q3BBV1 942 aa6.07□□□□□ -1.44
HTT-202ENST00000502820 HERC4Q5GLZ8 1057 aaPredicted RBP6.07□□□□□ -1.44
HTT-202ENST00000502820 CCDC158Q5M9N0 1113 aa6.07□□□□□ -1.44
HTT-202ENST00000502820 TMEM63BQ5T3F8 832 aa6.07□□□□□ -1.44
HTT-202ENST00000502820 FRMD5Q7Z6J6 570 aa6.07□□□□□ -1.44
HTT-202ENST00000502820 RPAINQ86UA6 219 aa6.07□□□□□ -1.44
HTT-202ENST00000502820 METTL16Q86W50 562 aaKnown RBP6.07□□□□□ -1.44
HTT-202ENST00000502820 MYOCDQ8IZQ8 938 aa6.07□□□□□ -1.44
HTT-202ENST00000502820 MAGEB6Q8N7X4 407 aa6.07□□□□□ -1.44
HTT-202ENST00000502820 NEK9Q8TD19 979 aa6.07□□□□□ -1.44
HTT-202ENST00000502820 NKD2Q969F2 451 aaPredicted RBP6.07□□□□□ -1.44
HTT-202ENST00000502820 KIFC2Q96AC6 838 aa6.07□□□□□ -1.44
HTT-202ENST00000502820 VWCEQ96DN2 955 aa6.07□□□□□ -1.44
HTT-202ENST00000502820 PABPC5Q96DU9 382 aaKnown RBP6.07□□□□□ -1.44
HTT-202ENST00000502820 MRPL38Q96DV4 380 aaKnown RBP6.07□□□□□ -1.44
HTT-202ENST00000502820 CHAMP1Q96JM3 812 aa6.07□□□□□ -1.44
HTT-202ENST00000502820 PDLIM2Q96JY6 352 aa6.07□□□□□ -1.44
HTT-202ENST00000502820 ZNF512BQ96KM6 892 aaPredicted RBP6.07□□□□□ -1.44
HTT-202ENST00000502820 RPGRIP1Q96KN7 1286 aa6.07□□□□□ -1.44
HTT-202ENST00000502820 NUP88Q99567 741 aaPredicted RBP6.07□□□□□ -1.44
HTT-202ENST00000502820 RAD9AQ99638 391 aa6.07□□□□□ -1.44
HTT-202ENST00000502820 DBNDD2Q9BQY9 259 aa6.07□□□□□ -1.44
HTT-202ENST00000502820 SH2D4AQ9H788 454 aa6.07□□□□□ -1.44
HTT-202ENST00000502820 ZBTB40Q9NUA8 1239 aa6.07□□□□□ -1.44
HTT-202ENST00000502820 CCDC39Q9UFE4 941 aa6.07□□□□□ -1.44
HTT-202ENST00000502820 DBNLQ9UJU6 430 aaKnown RBP6.07□□□□□ -1.44
HTT-202ENST00000502820 RIPK3Q9Y572 518 aa6.07□□□□□ -1.44
HTT-202ENST00000502820 WDR46O15213 610 aaKnown RBP6.06□□□□□ -1.44
HTT-202ENST00000502820 CTAGE5O15320 804 aa6.06□□□□□ -1.44
HTT-202ENST00000502820 IGSF3O75054 1194 aa6.06□□□□□ -1.44
HTT-202ENST00000502820 ZBED4O75132 1171 aa6.06□□□□□ -1.44
HTT-202ENST00000502820 CYP2E1P05181 493 aaPredicted RBP6.06□□□□□ -1.44
HTT-202ENST00000502820 SMPD1P17405 629 aa6.06□□□□□ -1.44
HTT-202ENST00000502820 GTF2F1P35269 517 aaKnown RBP eCLIP6.06□□□□□ -1.44
HTT-202ENST00000502820 COPB2P35606 906 aa6.06□□□□□ -1.44
HTT-202ENST00000502820 ZAP70P43403 619 aa6.06□□□□□ -1.44
HTT-202ENST00000502820 NDUFV1P49821 464 aa6.06□□□□□ -1.44
HTT-202ENST00000502820 PPP4CP60510 307 aa6.06□□□□□ -1.44
HTT-202ENST00000502820 ERVK-21P61565 698 aa6.06□□□□□ -1.44
HTT-202ENST00000502820 ZXDAP98168 799 aa6.06□□□□□ -1.44
HTT-202ENST00000502820 CNTN2Q02246 1040 aa6.06□□□□□ -1.44
HTT-202ENST00000502820 C1QBPQ07021 282 aaKnown RBP6.06□□□□□ -1.44
HTT-202ENST00000502820 DLX2Q07687 328 aaPredicted RBP6.06□□□□□ -1.44
HTT-202ENST00000502820 IKQ13123 557 aaPredicted RBP6.06□□□□□ -1.44
HTT-202ENST00000502820 BFSP2Q13515 415 aa6.06□□□□□ -1.44
HTT-202ENST00000502820 COL9A2Q14055 689 aaPredicted RBP6.06□□□□□ -1.44
HTT-202ENST00000502820 TIGD5Q53EQ6 642 aa6.06□□□□□ -1.44
HTT-202ENST00000502820 TMEM179Q6ZVK1 233 aa6.06□□□□□ -1.44
HTT-202ENST00000502820 FBXO16Q8IX29 292 aaPredicted RBP6.06□□□□□ -1.44
HTT-202ENST00000502820 SIRT2Q8IXJ6 389 aa6.06□□□□□ -1.44
HTT-202ENST00000502820 KIAA2013Q8IYS2 634 aa6.06□□□□□ -1.44
HTT-202ENST00000502820 MSL3Q8N5Y2 521 aaKnown RBP6.06□□□□□ -1.44
HTT-202ENST00000502820 EAF2Q96CJ1 260 aaPredicted RBP6.06□□□□□ -1.44
HTT-202ENST00000502820 DYNLL2Q96FJ2 89 aa6.06□□□□□ -1.44
HTT-202ENST00000502820 YME1L1Q96TA2 773 aa6.06□□□□□ -1.44
HTT-202ENST00000502820 TEX13BQ9BXU2 312 aa6.06□□□□□ -1.44
HTT-202ENST00000502820 UPF3AQ9H1J1 476 aaKnown RBP6.06□□□□□ -1.44
HTT-202ENST00000502820 NSUN3Q9H649 340 aaKnown RBP6.06□□□□□ -1.44
HTT-202ENST00000502820 VCPKMTQ9H867 229 aa6.06□□□□□ -1.44
HTT-202ENST00000502820 PIH1D3Q9NQM4 214 aaKnown RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms