RNA–Protein interactions for RNA: ENST00000499038.2

UBE2B-202, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 3

Gene UBE2B, Length 682 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-202ENST00000499038 MCMBPQ9BTE3 642 aa6.92□□□□□ -1.3
UBE2B-202ENST00000499038 ZC3H12DA2A288 527 aaKnown RBP6.91□□□□□ -1.3
UBE2B-202ENST00000499038 KRTAP9-7A8MTY7 169 aa6.91□□□□□ -1.3
UBE2B-202ENST00000499038 B8ZZF3 427 aa6.91□□□□□ -1.3
UBE2B-202ENST00000499038 NAT2P11245 290 aa6.91□□□□□ -1.3
UBE2B-202ENST00000499038 LIMS1P48059 325 aa6.91□□□□□ -1.3
UBE2B-202ENST00000499038 NLGN1Q8N2Q7 840 aa6.91□□□□□ -1.3
UBE2B-202ENST00000499038 ARHGEF39Q8N4T4 335 aa6.91□□□□□ -1.3
UBE2B-202ENST00000499038 CRACR2BQ8N4Y2 399 aaPredicted RBP6.91□□□□□ -1.3
UBE2B-202ENST00000499038 NLGN2Q8NFZ4 835 aa6.91□□□□□ -1.3
UBE2B-202ENST00000499038 RCC1LQ96I51 464 aaKnown RBP6.91□□□□□ -1.3
UBE2B-202ENST00000499038 AKT3Q9Y243 479 aa6.91□□□□□ -1.3
UBE2B-202ENST00000499038 FAN1Q9Y2M0 1017 aa6.91□□□□□ -1.3
UBE2B-202ENST00000499038 RWDD3Q9Y3V2 267 aa6.91□□□□□ -1.3
UBE2B-202ENST00000499038 HCFC2Q9Y5Z7 792 aa6.91□□□□□ -1.3
UBE2B-202ENST00000499038 TRBV23OR9-2A0A075B6M9 112 aa6.9□□□□□ -1.3
UBE2B-202ENST00000499038 NPHP3-ACAD11A0A0J9YXS1 232 aa6.9□□□□□ -1.3
UBE2B-202ENST00000499038 PAMP19021 973 aa6.9□□□□□ -1.3
UBE2B-202ENST00000499038 PRR5P85299 388 aa6.9□□□□□ -1.3
UBE2B-202ENST00000499038 POMZP3Q6PJE2 187 aa6.9□□□□□ -1.3
UBE2B-202ENST00000499038 CPNE8Q86YQ8 564 aa6.9□□□□□ -1.3
UBE2B-202ENST00000499038 SP8Q8IXZ3 490 aa6.9□□□□□ -1.3
UBE2B-202ENST00000499038 LZTR1Q8N653 840 aa6.9□□□□□ -1.3
UBE2B-202ENST00000499038 FAM169BQ8N8A8 192 aa6.9□□□□□ -1.3
UBE2B-202ENST00000499038 USP33Q8TEY7 942 aa6.9□□□□□ -1.3
UBE2B-202ENST00000499038 PPP1R14AQ96A00 147 aa6.9□□□□□ -1.3
UBE2B-202ENST00000499038 NOP56O00567 594 aaKnown RBP6.89□□□□□ -1.31
UBE2B-202ENST00000499038 PRRG2O14669 202 aa6.89□□□□□ -1.31
UBE2B-202ENST00000499038 KCNH1O95259 989 aa6.89□□□□□ -1.31
UBE2B-202ENST00000499038 ALG3Q92685 438 aa6.89□□□□□ -1.31
UBE2B-202ENST00000499038 RELTQ969Z4 430 aa6.89□□□□□ -1.31
UBE2B-202ENST00000499038 APBA2Q99767 749 aa6.89□□□□□ -1.31
UBE2B-202ENST00000499038 CAPN10Q9HC96 672 aa6.89□□□□□ -1.31
UBE2B-202ENST00000499038 APEX2Q9UBZ4 518 aa6.89□□□□□ -1.31
UBE2B-202ENST00000499038 SUSD2Q9UGT4 822 aa6.89□□□□□ -1.31
UBE2B-202ENST00000499038 NUDT5Q9UKK9 219 aa6.89□□□□□ -1.31
UBE2B-202ENST00000499038 IRS2Q9Y4H2 1338 aa6.89□□□□□ -1.31
UBE2B-202ENST00000499038 NCANO14594 1321 aa6.88□□□□□ -1.31
UBE2B-202ENST00000499038 A0A0G2JLL6 359 aaPredicted RBP6.88□□□□□ -1.31
UBE2B-202ENST00000499038 NPHS1O60500 1241 aa6.88□□□□□ -1.31
UBE2B-202ENST00000499038 GLI4P10075 376 aa6.88□□□□□ -1.31
UBE2B-202ENST00000499038 IGFBP6P24592 240 aaPredicted RBP6.88□□□□□ -1.31
UBE2B-202ENST00000499038 RBM10P98175 930 aaKnown RBP6.88□□□□□ -1.31
UBE2B-202ENST00000499038 NFIXQ14938 502 aa6.88□□□□□ -1.31
UBE2B-202ENST00000499038 NCAPHQ15003 741 aa6.88□□□□□ -1.31
UBE2B-202ENST00000499038 LINC01356Q8N9X3 169 aa6.88□□□□□ -1.31
UBE2B-202ENST00000499038 C20orf173Q96LM9 149 aa6.88□□□□□ -1.31
UBE2B-202ENST00000499038 RNF38Q9H0F5 515 aa6.88□□□□□ -1.31
UBE2B-202ENST00000499038 RXFP1Q9HBX9 757 aa6.88□□□□□ -1.31
UBE2B-202ENST00000499038 GULP1Q9UBP9 304 aa6.88□□□□□ -1.31
UBE2B-202ENST00000499038 ZNF143P52747 638 aaPredicted RBP6.87□□□□□ -1.31
UBE2B-202ENST00000499038 VPS37DQ86XT2 251 aa6.87□□□□□ -1.31
UBE2B-202ENST00000499038 BVESQ8NE79 360 aa6.87□□□□□ -1.31
UBE2B-202ENST00000499038 FEZF2Q8TBJ5 459 aa6.87□□□□□ -1.31
UBE2B-202ENST00000499038 PEX11GQ96HA9 241 aa6.87□□□□□ -1.31
UBE2B-202ENST00000499038 CLEC1BQ9P126 229 aa6.87□□□□□ -1.31
UBE2B-202ENST00000499038 SSBP05455 408 aaKnown RBP eCLIP6.86□□□□□ -1.31
UBE2B-202ENST00000499038 NCAM1P13591 858 aa6.86□□□□□ -1.31
UBE2B-202ENST00000499038 ATF4P18848 351 aaPredicted RBP6.86□□□□□ -1.31
UBE2B-202ENST00000499038 FBLN1P23142 703 aa6.86□□□□□ -1.31
UBE2B-202ENST00000499038 ERCC5P28715 1186 aaPredicted RBP6.86□□□□□ -1.31
UBE2B-202ENST00000499038 FOXO4P98177 505 aa6.86□□□□□ -1.31
UBE2B-202ENST00000499038 SCRN1Q12765 414 aa6.86□□□□□ -1.31
UBE2B-202ENST00000499038 ZDHHC14Q8IZN3 488 aa6.86□□□□□ -1.31
UBE2B-202ENST00000499038 NETO2Q8NC67 525 aa6.86□□□□□ -1.31
UBE2B-202ENST00000499038 PLA2G2DQ9UNK4 145 aa6.86□□□□□ -1.31
UBE2B-202ENST00000499038 EMC9Q9Y3B6 208 aa6.86□□□□□ -1.31
UBE2B-202ENST00000499038 PMF1-BGLAPU3KQ54 211 aa6.86□□□□□ -1.31
UBE2B-202ENST00000499038 OTOL1A6NHN0 477 aaPredicted RBP6.85□□□□□ -1.31
UBE2B-202ENST00000499038 ASGR2P07307 311 aa6.85□□□□□ -1.31
UBE2B-202ENST00000499038 PLS3P13797 630 aa6.85□□□□□ -1.31
UBE2B-202ENST00000499038 WWC2Q6AWC2 1192 aa6.85□□□□□ -1.31
UBE2B-202ENST00000499038 ZNF513Q8N8E2 541 aaPredicted RBP6.85□□□□□ -1.31
UBE2B-202ENST00000499038 TSPAN17Q96FV3 270 aa6.85□□□□□ -1.31
UBE2B-202ENST00000499038 XYLT2Q9H1B5 865 aa6.85□□□□□ -1.31
UBE2B-202ENST00000499038 LUC7LQ9NQ29 371 aaKnown RBP6.85□□□□□ -1.31
UBE2B-202ENST00000499038 RTEL1Q9NZ71 1219 aa6.85□□□□□ -1.31
UBE2B-202ENST00000499038 FBLN5Q9UBX5 448 aa6.85□□□□□ -1.31
UBE2B-202ENST00000499038 MRVI1Q9Y6F6 885 aa6.85□□□□□ -1.31
UBE2B-202ENST00000499038 C7orf72A4D263 438 aa6.84□□□□□ -1.31
UBE2B-202ENST00000499038 SMAD7O15105 426 aaKnown RBP6.84□□□□□ -1.31
UBE2B-202ENST00000499038 FUCA1P04066 466 aa6.84□□□□□ -1.31
UBE2B-202ENST00000499038 ATF2P15336 505 aa6.84□□□□□ -1.31
UBE2B-202ENST00000499038 SYN1P17600 705 aa6.84□□□□□ -1.31
UBE2B-202ENST00000499038 PMLP29590 882 aa6.84□□□□□ -1.31
UBE2B-202ENST00000499038 MC3RP41968 323 aa6.84□□□□□ -1.31
UBE2B-202ENST00000499038 TNNI3KQ59H18 835 aa6.84□□□□□ -1.31
UBE2B-202ENST00000499038 LARP1BQ659C4 914 aaKnown RBP6.84□□□□□ -1.31
UBE2B-202ENST00000499038 GTF2IRD2BQ6EKJ0 949 aa6.84□□□□□ -1.31
UBE2B-202ENST00000499038 GTF2IRD2Q86UP8 949 aa6.84□□□□□ -1.31
UBE2B-202ENST00000499038 SYT8Q8NBV8 401 aa6.84□□□□□ -1.31
UBE2B-202ENST00000499038 MTA3Q9BTC8 594 aa6.84□□□□□ -1.31
UBE2B-202ENST00000499038 BCAS3Q9H6U6 928 aa6.84□□□□□ -1.31
UBE2B-202ENST00000499038 GPRC5CQ9NQ84 441 aa6.84□□□□□ -1.31
UBE2B-202ENST00000499038 ACTR10Q9NZ32 417 aa6.84□□□□□ -1.31
UBE2B-202ENST00000499038 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.84□□□□□ -1.312e-8■■■■□ 24.5
UBE2B-202ENST00000499038 ZBTB7AO95365 584 aa6.83□□□□□ -1.32
UBE2B-202ENST00000499038 BUD31P41223 144 aaPredicted RBP6.83□□□□□ -1.32
UBE2B-202ENST00000499038 CAP1Q01518 475 aa6.83□□□□□ -1.32
UBE2B-202ENST00000499038 GNL2Q13823 731 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms