RNA–Protein interactions for RNA: ENST00000498724.5

TNC-208, Transcript of tenascin C, human

TSL 2

Gene TNC, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TNC-208	ENST00000498724	TTLL11	Q8NHH1	800 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	NOC3L	Q8WTT2	800 aa	Known RBP	4.98	□□□□□ -1.61
TNC-208	ENST00000498724	COG1	Q8WTW3	980 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	RUBCN	Q92622	972 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	FAM89A	Q96GI7	184 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	EPSTI1	Q96J88	318 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	CAPZA3	Q96KX2	299 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	DRC1	Q96MC2	740 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	MMS19	Q96T76	1030 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	ZKSCAN3	Q9BRR0	538 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	SELENOO	Q9BVL4	669 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	BLZF1	Q9H2G9	400 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	PLEKHA4	Q9H4M7	779 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	INCENP	Q9NQS7	918 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	GOLGA6A	Q9NYA3	693 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	VPS54	Q9P1Q0	977 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	VPS9D1	Q9Y2B5	631 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	LUC7L2	Q9Y383	392 aa	Known RBP	4.98	□□□□□ -1.61
TNC-208	ENST00000498724	REXO2	Q9Y3B8	237 aa	Known RBP	4.98	□□□□□ -1.61
TNC-208	ENST00000498724	RIPOR2	Q9Y4F9	1068 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	SLC4A4	Q9Y6R1	1079 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	XDH	P47989	1333 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	QSER1	Q2KHR3	1735 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	SHANK3	Q9BYB0	1731 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	UBR2	Q8IWV8	1755 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724		A0A1W2PQC6	194 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	ANO9	A1A5B4	782 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	LRRC10B	A6NIK2	292 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	GSG1L2	A8MUP6	293 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	RNF225	M0QZC1	329 aa	Predicted RBP	4.97	□□□□□ -1.61
TNC-208	ENST00000498724	PES1	O00541	588 aa	Known RBP	4.97	□□□□□ -1.61
TNC-208	ENST00000498724	ENC1	O14682	589 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	PRPF3	O43395	683 aa	Known RBP	4.97	□□□□□ -1.61
TNC-208	ENST00000498724	PRKAB2	O43741	272 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	SHOX2	O60902	331 aa	Predicted RBP	4.97	□□□□□ -1.61
TNC-208	ENST00000498724	ERLIN2	O94905	339 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	PDE8B	O95263	885 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	ABL1	P00519	1130 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	RPN1	P04843	607 aa	Known RBP	4.97	□□□□□ -1.61
TNC-208	ENST00000498724	MMP10	P09238	476 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	CALM1	P0DP23	149 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	CALM2	P0DP24	149 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	CALM3	P0DP25	149 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	EEF1G	P26641	437 aa	Known RBP	4.97	□□□□□ -1.61
TNC-208	ENST00000498724	RFC4	P35249	363 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	GGCX	P38435	758 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	USP8	P40818	1118 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	STAT6	P42226	847 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	CCT5	P48643	541 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	GNGT1	P63211	74 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	ATP2C1	P98194	919 aa	Predicted RBP	4.97	□□□□□ -1.61
TNC-208	ENST00000498724	PPARA	Q07869	468 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	C2orf54	Q08AI8	447 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	MCTP2	Q6DN12	878 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	PDXDC2P	Q6P474	469 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	CCNI2	Q6ZMN8	369 aa	Predicted RBP	4.97	□□□□□ -1.61
TNC-208	ENST00000498724	ZNF662	Q6ZS27	426 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	SND1	Q7KZF4	910 aa	Known RBP eCLIP	4.97	□□□□□ -1.61
TNC-208	ENST00000498724	CCDC91	Q7Z6B0	441 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	CATIP	Q7Z7H3	387 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	CERS3	Q8IU89	383 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	SUGP1	Q8IWZ8	645 aa	Known RBP	4.97	□□□□□ -1.61
TNC-208	ENST00000498724	AMOTL1	Q8IY63	956 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	GSPT2	Q8IYD1	628 aa	Known RBP	4.97	□□□□□ -1.61
TNC-208	ENST00000498724	NLGN1	Q8N2Q7	840 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	LCORL	Q8N3X6	602 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	ANKK1	Q8NFD2	765 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	LPIN2	Q92539	896 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	ESR2	Q92731	530 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	STAM	Q92783	540 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	CCDC47	Q96A33	483 aa	Known RBP	4.97	□□□□□ -1.61
TNC-208	ENST00000498724	TRIM47	Q96LD4	638 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	PCMTD1	Q96MG8	357 aa	Predicted RBP	4.97	□□□□□ -1.61
TNC-208	ENST00000498724	RUFY1	Q96T51	708 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	DNAJC7	Q99615	494 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	CHP1	Q99653	195 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	PHF20	Q9BVI0	1012 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	NUP58	Q9BVL2	599 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	TSGA10	Q9BZW7	698 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	THAP9	Q9H5L6	903 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	GREM2	Q9H772	168 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	GNL3L	Q9NVN8	582 aa	Known RBP	4.97	□□□□□ -1.61
TNC-208	ENST00000498724	RBM28	Q9NW13	759 aa	Known RBP	4.97	□□□□□ -1.61
TNC-208	ENST00000498724	HDAC6	Q9UBN7	1215 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	TRIM10	Q9UDY6	481 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	TSKS	Q9UJT2	592 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	CAPN11	Q9UMQ6	739 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	BCS1L	Q9Y276	419 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	RTCB	Q9Y3I0	505 aa	Known RBP	4.97	□□□□□ -1.61
TNC-208	ENST00000498724	TACC3	Q9Y6A5	838 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	ITGB4	P16144	1822 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	COL24A1	Q17RW2	1714 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	TNKS	O95271	1327 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	PDS5A	Q29RF7	1337 aa	Known RBP	4.97	□□□□□ -1.61
TNC-208	ENST00000498724	MROH5	Q6ZUA9	1318 aa		4.97	□□□□□ -1.61
TNC-208	ENST00000498724	AKAP11	Q9UKA4	1901 aa		4.96	□□□□□ -1.62
TNC-208	ENST00000498724	TAF1L	Q8IZX4	1826 aa		4.96	□□□□□ -1.62
TNC-208	ENST00000498724	TTC26	A0AVF1	554 aa		4.96	□□□□□ -1.62
TNC-208	ENST00000498724	RCCD1	A6NED2	376 aa		4.96	□□□□□ -1.62
TNC-208	ENST00000498724		A6NNZ2	444 aa		4.96	□□□□□ -1.62

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