RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 CDC37Q16543 378 aaPredicted RBP10.09□□□□□ -0.79
FN1-227ENST00000498719 HSP90AA4PQ58FG1 418 aa10.09□□□□□ -0.79
FN1-227ENST00000498719 C16orf54Q6UWD8 224 aa10.09□□□□□ -0.79
FN1-227ENST00000498719 RELL1Q8IUW5 271 aa10.09□□□□□ -0.79
FN1-227ENST00000498719 FOXP4Q8IVH2 680 aaPredicted RBP10.09□□□□□ -0.79
FN1-227ENST00000498719 UBR7Q8N806 425 aa10.09□□□□□ -0.79
FN1-227ENST00000498719 PLPP7Q8NBV4 271 aa10.09□□□□□ -0.79
FN1-227ENST00000498719 PNMA1Q8ND90 353 aa10.09□□□□□ -0.79
FN1-227ENST00000498719 VPS37AQ8NEZ2 397 aa10.09□□□□□ -0.79
FN1-227ENST00000498719 DPF2Q92785 391 aa10.09□□□□□ -0.79
FN1-227ENST00000498719 NELL1Q92832 810 aa10.09□□□□□ -0.79
FN1-227ENST00000498719 TMEM87BQ96K49 555 aa10.09□□□□□ -0.79
FN1-227ENST00000498719 HPSEQ9Y251 543 aa10.09□□□□□ -0.79
FN1-227ENST00000498719 PAXBP1Q9Y5B6 917 aa10.09□□□□□ -0.79
FN1-227ENST00000498719 DOCK2Q92608 1830 aa10.09□□□□□ -0.79
FN1-227ENST00000498719 TAF1P21675 1872 aa10.09□□□□□ -0.79
FN1-227ENST00000498719 FDX1P10109 184 aa10.08□□□□□ -0.8
FN1-227ENST00000498719 MORC3Q14149 939 aa10.08□□□□□ -0.8
FN1-227ENST00000498719 E4F1Q66K89 784 aaPredicted RBP10.08□□□□□ -0.8
FN1-227ENST00000498719 CPLX2Q6PUV4 134 aaKnown RBP10.08□□□□□ -0.8
FN1-227ENST00000498719 SGMS1Q86VZ5 419 aa10.08□□□□□ -0.8
FN1-227ENST00000498719 ANKRD42Q8N9B4 389 aa10.08□□□□□ -0.8
FN1-227ENST00000498719 CERKQ8TCT0 537 aa10.08□□□□□ -0.8
FN1-227ENST00000498719 MPHOSPH8Q99549 860 aa10.08□□□□□ -0.8
FN1-227ENST00000498719 BPIFA3Q9BQP9 254 aa10.08□□□□□ -0.8
FN1-227ENST00000498719 OSBPL5Q9H0X9 879 aaPredicted RBP10.08□□□□□ -0.8
FN1-227ENST00000498719 PCDH10Q9P2E7 1040 aa10.08□□□□□ -0.8
FN1-227ENST00000498719 ZNF69Q9UC07 566 aa10.08□□□□□ -0.8
FN1-227ENST00000498719 KATNA1O75449 491 aa10.08□□□□□ -0.8
FN1-227ENST00000498719 SLC5A1P13866 664 aa10.08□□□□□ -0.8
FN1-227ENST00000498719 GNA15P30679 374 aa10.08□□□□□ -0.8
FN1-227ENST00000498719 GOLGA8FQ08AF8 430 aa10.08□□□□□ -0.8
FN1-227ENST00000498719 GOLGA8DPQ0D2H9 430 aa10.08□□□□□ -0.8
FN1-227ENST00000498719 MAP3K12Q12852 859 aa10.08□□□□□ -0.8
FN1-227ENST00000498719 TRIM29Q14134 588 aa10.08□□□□□ -0.8
FN1-227ENST00000498719 AKNAD1Q5T1N1 836 aa10.08□□□□□ -0.8
FN1-227ENST00000498719 TRPM4Q8TD43 1214 aa10.08□□□□□ -0.8
FN1-227ENST00000498719 MROH5Q6ZUA9 1318 aa10.08□□□□□ -0.8
FN1-227ENST00000498719 MYH6P13533 1939 aa10.08□□□□□ -0.8
FN1-227ENST00000498719 MYH2Q9UKX2 1941 aa10.08□□□□□ -0.8
FN1-227ENST00000498719 COL4A1P02462 1669 aa10.08□□□□□ -0.8
FN1-227ENST00000498719 ARAP2Q8WZ64 1704 aa10.08□□□□□ -0.8
FN1-227ENST00000498719 ERVV-1B6SEH8 477 aa10.07□□□□□ -0.8
FN1-227ENST00000498719 NDUFB5O43674 189 aa10.07□□□□□ -0.8
FN1-227ENST00000498719 PPP6R2O75170 966 aa10.07□□□□□ -0.8
FN1-227ENST00000498719 TCEA3O75764 348 aa10.07□□□□□ -0.8
FN1-227ENST00000498719 SERPINB3P29508 390 aa10.07□□□□□ -0.8
FN1-227ENST00000498719 IL6STP40189 918 aaPredicted RBP10.07□□□□□ -0.8
FN1-227ENST00000498719 TOB1P50616 345 aaPredicted RBP10.07□□□□□ -0.8
FN1-227ENST00000498719 SSRP1Q08945 709 aaKnown RBP10.07□□□□□ -0.8
FN1-227ENST00000498719 NR5A1Q13285 461 aa10.07□□□□□ -0.8
FN1-227ENST00000498719 ALFQ53S48 1182 aa10.07□□□□□ -0.8
FN1-227ENST00000498719 RESP18Q5W5W9 173 aa10.07□□□□□ -0.8
FN1-227ENST00000498719 MFSD6Q6ZSS7 791 aa10.07□□□□□ -0.8
FN1-227ENST00000498719 ADGRA1Q86SQ6 560 aa10.07□□□□□ -0.8
FN1-227ENST00000498719 HELQQ8TDG4 1101 aa10.07□□□□□ -0.8
FN1-227ENST00000498719 GPR101Q96P66 508 aaPredicted RBP10.07□□□□□ -0.8
FN1-227ENST00000498719 TUBE1Q9UJT0 475 aa10.07□□□□□ -0.8
FN1-227ENST00000498719 ZNF215Q9UL58 517 aaPredicted RBP10.07□□□□□ -0.8
FN1-227ENST00000498719 CD2APQ9Y5K6 639 aa10.07□□□□□ -0.8
FN1-227ENST00000498719 SLC4A4Q9Y6R1 1079 aa10.07□□□□□ -0.8
FN1-227ENST00000498719 MYH14Q7Z406 1995 aaKnown RBP10.07□□□□□ -0.8
FN1-227ENST00000498719 PNMA6FA0A0J9YX94 578 aa10.07□□□□□ -0.8
FN1-227ENST00000498719 BMP6P22004 513 aa10.07□□□□□ -0.8
FN1-227ENST00000498719 LIFRP42702 1097 aa10.07□□□□□ -0.8
FN1-227ENST00000498719 GSDMDP57764 484 aa10.07□□□□□ -0.8
FN1-227ENST00000498719 ALX1Q15699 326 aa10.07□□□□□ -0.8
FN1-227ENST00000498719 TBC1D10BQ4KMP7 808 aaPredicted RBP10.07□□□□□ -0.8
FN1-227ENST00000498719 SDR42E1Q8WUS8 393 aa10.07□□□□□ -0.8
FN1-227ENST00000498719 ACSBG1Q96GR2 724 aa10.07□□□□□ -0.8
FN1-227ENST00000498719 KCNH3Q9ULD8 1083 aa10.07□□□□□ -0.8
FN1-227ENST00000498719 BAZ2AQ9UIF9 1905 aaKnown RBP10.07□□□□□ -0.8
FN1-227ENST00000498719 DISP2A7MBM2 1401 aa10.07□□□□□ -0.8
FN1-227ENST00000498719 LRP5O75197 1615 aa10.07□□□□□ -0.8
FN1-227ENST00000498719 TMEM232C9JQI7 657 aa10.06□□□□□ -0.8
FN1-227ENST00000498719 MTA2O94776 668 aa10.06□□□□□ -0.8
FN1-227ENST00000498719 F2P00734 622 aa10.06□□□□□ -0.8
FN1-227ENST00000498719 NPR3P17342 541 aa10.06□□□□□ -0.8
FN1-227ENST00000498719 SFPQP23246 707 aaKnown RBP eCLIP10.06□□□□□ -0.8
FN1-227ENST00000498719 PDE4BQ07343 736 aa10.06□□□□□ -0.8
FN1-227ENST00000498719 INTS5Q6P9B9 1019 aaKnown RBP10.06□□□□□ -0.8
FN1-227ENST00000498719 NOSTRINQ8IVI9 506 aa10.06□□□□□ -0.8
FN1-227ENST00000498719 MICALL2Q8IY33 904 aa10.06□□□□□ -0.8
FN1-227ENST00000498719 DIS3L2Q8IYB7 885 aaKnown RBP10.06□□□□□ -0.8
FN1-227ENST00000498719 CELF2-AS1Q8N7Q2 184 aa10.06□□□□□ -0.8
FN1-227ENST00000498719 CNNM3Q8NE01 707 aa10.06□□□□□ -0.8
FN1-227ENST00000498719 NUP133Q8WUM0 1156 aa10.06□□□□□ -0.8
FN1-227ENST00000498719 JPH3Q8WXH2 748 aaPredicted RBP10.06□□□□□ -0.8
FN1-227ENST00000498719 TIFAQ96CG3 184 aa10.06□□□□□ -0.8
FN1-227ENST00000498719 ASPSCR1Q9BZE9 553 aa10.06□□□□□ -0.8
FN1-227ENST00000498719 IMPACTQ9P2X3 320 aa10.06□□□□□ -0.8
FN1-227ENST00000498719 CDV3Q9UKY7 258 aaKnown RBP10.06□□□□□ -0.8
FN1-227ENST00000498719 IPPQ9Y573 584 aa10.06□□□□□ -0.8
FN1-227ENST00000498719 PCDHA5Q9Y5H7 936 aa10.06□□□□□ -0.8
FN1-227ENST00000498719 NHSL1Q5SYE7 1610 aa10.06□□□□□ -0.8
FN1-227ENST00000498719 hCG_1642624A0A1W2PR95 340 aa10.06□□□□□ -0.8
FN1-227ENST00000498719 NBNO60934 754 aa10.06□□□□□ -0.8
FN1-227ENST00000498719 IFNAR1P17181 557 aa10.06□□□□□ -0.8
FN1-227ENST00000498719 EIF5P55010 431 aaKnown RBP10.06□□□□□ -0.8
FN1-227ENST00000498719 EGFL6Q8IUX8 553 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms