RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 KIF16BQ96L93 1317 aa6.59□□□□□ -1.35
FXN-205ENST00000498653 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.59□□□□□ -1.35
FXN-205ENST00000498653 CCER2I3L3R5 266 aa6.59□□□□□ -1.35
FXN-205ENST00000498653 ACTN4O43707 911 aaKnown RBP6.59□□□□□ -1.35
FXN-205ENST00000498653 KINO60870 393 aaKnown RBP6.59□□□□□ -1.35
FXN-205ENST00000498653 ASGR1P07306 291 aa6.59□□□□□ -1.35
FXN-205ENST00000498653 TAL1P17542 331 aaPredicted RBP6.59□□□□□ -1.35
FXN-205ENST00000498653 SPINK2P20155 84 aa6.59□□□□□ -1.35
FXN-205ENST00000498653 WDR5P61964 334 aaKnown RBP6.59□□□□□ -1.35
FXN-205ENST00000498653 COASYQ13057 564 aa6.59□□□□□ -1.35
FXN-205ENST00000498653 TRIM28Q13263 835 aaKnown RBP6.59□□□□□ -1.35
FXN-205ENST00000498653 TAF7Q15545 349 aaPredicted RBP6.59□□□□□ -1.35
FXN-205ENST00000498653 WDR78Q5VTH9 848 aa6.59□□□□□ -1.35
FXN-205ENST00000498653 GTF3C2Q8WUA4 911 aaPredicted RBP6.59□□□□□ -1.35
FXN-205ENST00000498653 ANKRD2Q9GZV1 360 aa6.59□□□□□ -1.35
FXN-205ENST00000498653 SORCS3Q9UPU3 1222 aa6.59□□□□□ -1.35
FXN-205ENST00000498653 ZFHX3Q15911 3703 aa6.59□□□□□ -1.35
FXN-205ENST00000498653 POLQO75417 2590 aa6.59□□□□□ -1.36
FXN-205ENST00000498653 DLG5Q8TDM6 1919 aa6.58□□□□□ -1.36
FXN-205ENST00000498653 CREBBPQ92793 2442 aa6.58□□□□□ -1.36
FXN-205ENST00000498653 PATJQ8NI35 1801 aa6.58□□□□□ -1.36
FXN-205ENST00000498653 H3BNC9 293 aa6.58□□□□□ -1.36
FXN-205ENST00000498653 J3QKU1 62 aa6.58□□□□□ -1.36
FXN-205ENST00000498653 B4GALT4O60513 344 aa6.58□□□□□ -1.36
FXN-205ENST00000498653 BAIAP3O94812 1187 aa6.58□□□□□ -1.36
FXN-205ENST00000498653 GJB5O95377 273 aa6.58□□□□□ -1.36
FXN-205ENST00000498653 ZNF865P0CJ78 1059 aaPredicted RBP6.58□□□□□ -1.36
FXN-205ENST00000498653 KCNJ4P48050 445 aa6.58□□□□□ -1.36
FXN-205ENST00000498653 CTSWP56202 376 aa6.58□□□□□ -1.36
FXN-205ENST00000498653 ADAM15Q13444 863 aa6.58□□□□□ -1.36
FXN-205ENST00000498653 EPC2Q52LR7 807 aa6.58□□□□□ -1.36
FXN-205ENST00000498653 SH3BP5LQ7L8J4 393 aa6.58□□□□□ -1.36
FXN-205ENST00000498653 PLBD2Q8NHP8 589 aa6.58□□□□□ -1.36
FXN-205ENST00000498653 DDX1Q92499 740 aaKnown RBP6.58□□□□□ -1.36
FXN-205ENST00000498653 SUSD6Q92537 303 aa6.58□□□□□ -1.36
FXN-205ENST00000498653 RAD9AQ99638 391 aa6.58□□□□□ -1.36
FXN-205ENST00000498653 TRPV6Q9H1D0 765 aa6.58□□□□□ -1.36
FXN-205ENST00000498653 CLMPQ9H6B4 373 aa6.58□□□□□ -1.36
FXN-205ENST00000498653 MRS2Q9HD23 443 aa6.58□□□□□ -1.36
FXN-205ENST00000498653 RXFP3Q9NSD7 469 aa6.58□□□□□ -1.36
FXN-205ENST00000498653 NRBP1Q9UHY1 535 aa6.58□□□□□ -1.36
FXN-205ENST00000498653 SMG5Q9UPR3 1016 aaKnown RBP6.58□□□□□ -1.36
FXN-205ENST00000498653 IVNS1ABPQ9Y6Y0 642 aa6.58□□□□□ -1.36
FXN-205ENST00000498653 MICAL3Q7RTP6 2002 aa6.57□□□□□ -1.36
FXN-205ENST00000498653 ZNFX1Q9P2E3 1918 aaKnown RBP6.57□□□□□ -1.36
FXN-205ENST00000498653 TM4SF5O14894 197 aa6.57□□□□□ -1.36
FXN-205ENST00000498653 GDF9O60383 454 aa6.57□□□□□ -1.36
FXN-205ENST00000498653 AKR1A1P14550 325 aa6.57□□□□□ -1.36
FXN-205ENST00000498653 ATF7P17544 494 aaPredicted RBP6.57□□□□□ -1.36
FXN-205ENST00000498653 NDUFV1P49821 464 aa6.57□□□□□ -1.36
FXN-205ENST00000498653 CCNA1P78396 465 aa6.57□□□□□ -1.36
FXN-205ENST00000498653 CHRNDQ07001 517 aa6.57□□□□□ -1.36
FXN-205ENST00000498653 MTMR2Q13614 643 aa6.57□□□□□ -1.36
FXN-205ENST00000498653 DPP9Q86TI2 863 aa6.57□□□□□ -1.36
FXN-205ENST00000498653 JARID2Q92833 1246 aaPredicted RBP6.57□□□□□ -1.36
FXN-205ENST00000498653 MAML3Q96JK9 1138 aa6.57□□□□□ -1.36
FXN-205ENST00000498653 RTP3Q9BQQ7 232 aa6.57□□□□□ -1.36
FXN-205ENST00000498653 FAM117AQ9C073 453 aa6.57□□□□□ -1.36
FXN-205ENST00000498653 RABGAP1Q9Y3P9 1069 aa6.57□□□□□ -1.36
FXN-205ENST00000498653 PCDHB3Q9Y5E6 796 aa6.57□□□□□ -1.36
FXN-205ENST00000498653 LRRFIP2Q9Y608 721 aaKnown RBP6.57□□□□□ -1.36
FXN-205ENST00000498653 ASXL3Q9C0F0 2248 aa6.57□□□□□ -1.36
FXN-205ENST00000498653 GRIN2DO15399 1336 aa6.56□□□□□ -1.36
FXN-205ENST00000498653 SPTLC1O15269 473 aa6.56□□□□□ -1.36
FXN-205ENST00000498653 ADCY6O43306 1168 aa6.56□□□□□ -1.36
FXN-205ENST00000498653 TAF5LO75529 589 aa6.56□□□□□ -1.36
FXN-205ENST00000498653 GLP2RO95838 553 aa6.56□□□□□ -1.36
FXN-205ENST00000498653 TOP3BO95985 862 aaKnown RBP6.56□□□□□ -1.36
FXN-205ENST00000498653 PCCAP05165 728 aaPredicted RBP6.56□□□□□ -1.36
FXN-205ENST00000498653 EIF2S2P20042 333 aaKnown RBP6.56□□□□□ -1.36
FXN-205ENST00000498653 GPM6BQ13491 265 aa6.56□□□□□ -1.36
FXN-205ENST00000498653 MAML2Q8IZL2 1156 aaPredicted RBP6.56□□□□□ -1.36
FXN-205ENST00000498653 TTLL11Q8NHH1 800 aa6.56□□□□□ -1.36
FXN-205ENST00000498653 TBC1D2Q9BYX2 928 aa6.56□□□□□ -1.36
FXN-205ENST00000498653 BTBD7Q9P203 1132 aa6.56□□□□□ -1.36
FXN-205ENST00000498653 NUDCQ9Y266 331 aa6.56□□□□□ -1.36
FXN-205ENST00000498653 LAMA1P25391 3075 aa6.56□□□□□ -1.36
FXN-205ENST00000498653 DOPEY2Q9Y3R5 2298 aa6.56□□□□□ -1.36
FXN-205ENST00000498653 RBAK-RBAKDNI3L0D1 243 aa6.55□□□□□ -1.36
FXN-205ENST00000498653 CTAGE5O15320 804 aa6.55□□□□□ -1.36
FXN-205ENST00000498653 NR1I2O75469 434 aa6.55□□□□□ -1.36
FXN-205ENST00000498653 HSP90B1P14625 803 aaKnown RBP6.55□□□□□ -1.36
FXN-205ENST00000498653 SP100P23497 879 aaPredicted RBP6.55□□□□□ -1.36
FXN-205ENST00000498653 KCNJ6P48051 423 aa6.55□□□□□ -1.36
FXN-205ENST00000498653 FUT2Q10981 343 aa6.55□□□□□ -1.36
FXN-205ENST00000498653 RRP1BQ14684 758 aaKnown RBP6.55□□□□□ -1.36
FXN-205ENST00000498653 WDR43Q15061 677 aaKnown RBP eCLIP6.55□□□□□ -1.36
FXN-205ENST00000498653 CCDC184Q52MB2 194 aa6.55□□□□□ -1.36
FXN-205ENST00000498653 CDC42EP5Q6NZY7 148 aa6.55□□□□□ -1.36
FXN-205ENST00000498653 ZNF605Q86T29 641 aa6.55□□□□□ -1.36
FXN-205ENST00000498653 PROSER1Q86XN7 944 aa6.55□□□□□ -1.36
FXN-205ENST00000498653 SPIRE2Q8WWL2 714 aa6.55□□□□□ -1.36
FXN-205ENST00000498653 RTF1Q92541 710 aaKnown RBP6.55□□□□□ -1.36
FXN-205ENST00000498653 SECISBP2LQ93073 1101 aaKnown RBP6.55□□□□□ -1.36
FXN-205ENST00000498653 EPC1Q9H2F5 836 aa6.55□□□□□ -1.36
FXN-205ENST00000498653 NF1P21359 2839 aa6.54□□□□□ -1.36
FXN-205ENST00000498653 ENO4A6NNW6 628 aa6.54□□□□□ -1.36
FXN-205ENST00000498653 CAPNS1P04632 268 aa6.54□□□□□ -1.36
FXN-205ENST00000498653 RFC2P35250 354 aa6.54□□□□□ -1.36
FXN-205ENST00000498653 BACE1P56817 501 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms