RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 C11orf74Q86VG3 221 aa10.59□□□□□ -0.71
SNX13-212ENST00000498463 FBXO11Q86XK2 927 aa10.59□□□□□ -0.71
SNX13-212ENST00000498463 CPA6Q8N4T0 437 aa10.59□□□□□ -0.71
SNX13-212ENST00000498463 GALNT6Q8NCL4 622 aa10.59□□□□□ -0.71
SNX13-212ENST00000498463 NPLOC4Q8TAT6 608 aa10.59□□□□□ -0.71
SNX13-212ENST00000498463 CHTF18Q8WVB6 975 aa10.59□□□□□ -0.71
SNX13-212ENST00000498463 COPS5Q92905 334 aa10.59□□□□□ -0.71
SNX13-212ENST00000498463 MCMBPQ9BTE3 642 aa10.59□□□□□ -0.71
SNX13-212ENST00000498463 CELF4Q9BZC1 486 aaKnown RBP10.59□□□□□ -0.71
SNX13-212ENST00000498463 B4GALT6Q9UBX8 382 aa10.59□□□□□ -0.71
SNX13-212ENST00000498463 ANKRD6Q9Y2G4 727 aa10.59□□□□□ -0.71
SNX13-212ENST00000498463 NPFFR2Q9Y5X5 522 aa10.59□□□□□ -0.71
SNX13-212ENST00000498463 ST14Q9Y5Y6 855 aa10.59□□□□□ -0.71
SNX13-212ENST00000498463 SIGLEC6O43699 453 aa10.58□□□□□ -0.72
SNX13-212ENST00000498463 LRRN2O75325 713 aa10.58□□□□□ -0.72
SNX13-212ENST00000498463 CKMP06732 381 aa10.58□□□□□ -0.72
SNX13-212ENST00000498463 ATP2A2P16615 1042 aaKnown RBP10.58□□□□□ -0.72
SNX13-212ENST00000498463 GRIK1P39086 918 aa10.58□□□□□ -0.72
SNX13-212ENST00000498463 RECQLP46063 649 aaPredicted RBP10.58□□□□□ -0.72
SNX13-212ENST00000498463 SRSF11Q05519 484 aaKnown RBP10.58□□□□□ -0.72
SNX13-212ENST00000498463 TMEM240Q5SV17 173 aa10.58□□□□□ -0.72
SNX13-212ENST00000498463 FDX2Q6P4F2 183 aa10.58□□□□□ -0.72
SNX13-212ENST00000498463 CHST14Q8NCH0 376 aa10.58□□□□□ -0.72
SNX13-212ENST00000498463 FRS2Q8WU20 508 aa10.58□□□□□ -0.72
SNX13-212ENST00000498463 SARGQ9BW04 601 aa10.58□□□□□ -0.72
SNX13-212ENST00000498463 COL25A1Q9BXS0 654 aaPredicted RBP10.58□□□□□ -0.72
SNX13-212ENST00000498463 GPR27Q9NS67 375 aa10.58□□□□□ -0.72
SNX13-212ENST00000498463 ZBTB21Q9ULJ3 1066 aa10.58□□□□□ -0.72
SNX13-212ENST00000498463 RNF112Q9ULX5 631 aa10.58□□□□□ -0.72
SNX13-212ENST00000498463 IFIT2P09913 472 aaKnown RBP10.57□□□□□ -0.72
SNX13-212ENST00000498463 MECP2P51608 486 aaKnown RBP10.57□□□□□ -0.72
SNX13-212ENST00000498463 PCBP2Q15366 365 aaKnown RBP eCLIP10.57□□□□□ -0.72
SNX13-212ENST00000498463 CLRN3Q8NCR9 226 aa10.57□□□□□ -0.72
SNX13-212ENST00000498463 PCDH19Q8TAB3 1148 aa10.57□□□□□ -0.72
SNX13-212ENST00000498463 BSDC1Q9NW68 430 aaPredicted RBP10.57□□□□□ -0.72
SNX13-212ENST00000498463 GIT1Q9Y2X7 761 aa10.57□□□□□ -0.72
SNX13-212ENST00000498463 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.56□□□□□ -0.72
SNX13-212ENST00000498463 CCDC189A1A4V9 331 aa10.56□□□□□ -0.72
SNX13-212ENST00000498463 MEFVO15553 781 aaPredicted RBP10.56□□□□□ -0.72
SNX13-212ENST00000498463 PRAMEF1O95521 474 aa10.56□□□□□ -0.72
SNX13-212ENST00000498463 NBPF7P0C2Y1 421 aaPredicted RBP10.56□□□□□ -0.72
SNX13-212ENST00000498463 SRGAP2CP0DJJ0 459 aa10.56□□□□□ -0.72
SNX13-212ENST00000498463 KPNA1P52294 538 aaPredicted RBP10.56□□□□□ -0.72
SNX13-212ENST00000498463 POU4F1Q01851 419 aa10.56□□□□□ -0.72
SNX13-212ENST00000498463 TESK1Q15569 626 aa10.56□□□□□ -0.72
SNX13-212ENST00000498463 RGL3Q3MIN7 710 aa10.56□□□□□ -0.72
SNX13-212ENST00000498463 TRAPPC3LQ5T215 181 aa10.56□□□□□ -0.72
SNX13-212ENST00000498463 IL31Q6EBC2 164 aa10.56□□□□□ -0.72
SNX13-212ENST00000498463 EPM2AIP1Q7L775 607 aaPredicted RBP10.56□□□□□ -0.72
SNX13-212ENST00000498463 FMR1NBQ8N0W7 255 aaPredicted RBP10.56□□□□□ -0.72
SNX13-212ENST00000498463 C1orf162Q8NEQ5 155 aaPredicted RBP10.56□□□□□ -0.72
SNX13-212ENST00000498463 CLIP3Q96DZ5 547 aa10.56□□□□□ -0.72
SNX13-212ENST00000498463 ALG1Q9BT22 464 aa10.56□□□□□ -0.72
SNX13-212ENST00000498463 GPRC5CQ9NQ84 441 aa10.56□□□□□ -0.72
SNX13-212ENST00000498463 CHST7Q9NS84 486 aa10.56□□□□□ -0.72
SNX13-212ENST00000498463 MINPP1Q9UNW1 487 aa10.56□□□□□ -0.72
SNX13-212ENST00000498463 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.55□□□□□ -0.72
SNX13-212ENST00000498463 SHISA8B8ZZ34 492 aa10.55□□□□□ -0.72
SNX13-212ENST00000498463 MEIS1O00470 390 aa10.55□□□□□ -0.72
SNX13-212ENST00000498463 SH3BP5O60239 455 aa10.55□□□□□ -0.72
SNX13-212ENST00000498463 FOSP01100 380 aaPredicted RBP10.55□□□□□ -0.72
SNX13-212ENST00000498463 CD3EP07766 207 aa10.55□□□□□ -0.72
SNX13-212ENST00000498463 RAB6AP20340 208 aa10.55□□□□□ -0.72
SNX13-212ENST00000498463 SESN3P58005 492 aa10.55□□□□□ -0.72
SNX13-212ENST00000498463 PAK1Q13153 545 aa10.55□□□□□ -0.72
SNX13-212ENST00000498463 LBX2Q6XYB7 198 aa10.55□□□□□ -0.72
SNX13-212ENST00000498463 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.55□□□□□ -0.72
SNX13-212ENST00000498463 PNMA8AQ86V59 439 aaPredicted RBP10.55□□□□□ -0.72
SNX13-212ENST00000498463 CCDC103Q8IW40 242 aa10.55□□□□□ -0.72
SNX13-212ENST00000498463 PJA1Q8NG27 643 aa10.55□□□□□ -0.72
SNX13-212ENST00000498463 ACSS3Q9H6R3 686 aa10.55□□□□□ -0.72
SNX13-212ENST00000498463 C14orf119Q9NWQ9 140 aa10.55□□□□□ -0.72
SNX13-212ENST00000498463 USP25Q9UHP3 1055 aa10.55□□□□□ -0.72
SNX13-212ENST00000498463 TAGLN3Q9UI15 199 aa10.55□□□□□ -0.72
SNX13-212ENST00000498463 TMEFF2Q9UIK5 374 aaPredicted RBP10.55□□□□□ -0.72
SNX13-212ENST00000498463 BACE2Q9Y5Z0 518 aa10.55□□□□□ -0.72
SNX13-212ENST00000498463 WASHC2AQ641Q2 1341 aa10.55□□□□□ -0.72
SNX13-212ENST00000498463 ARNTLO00327 626 aa10.54□□□□□ -0.72
SNX13-212ENST00000498463 AURKAO14965 403 aa10.54□□□□□ -0.72
SNX13-212ENST00000498463 OIP5O43482 229 aa10.54□□□□□ -0.72
SNX13-212ENST00000498463 MSCO60682 206 aa10.54□□□□□ -0.72
SNX13-212ENST00000498463 RBP3P10745 1247 aa10.54□□□□□ -0.72
SNX13-212ENST00000498463 AMPD1P23109 780 aa10.54□□□□□ -0.72
SNX13-212ENST00000498463 CYP2C19P33261 490 aa10.54□□□□□ -0.72
SNX13-212ENST00000498463 LTBRP36941 435 aa10.54□□□□□ -0.72
SNX13-212ENST00000498463 NEK3P51956 506 aa10.54□□□□□ -0.72
SNX13-212ENST00000498463 PICALMQ13492 652 aa10.54□□□□□ -0.72
SNX13-212ENST00000498463 MORC3Q14149 939 aa10.54□□□□□ -0.72
SNX13-212ENST00000498463 GBX1Q14549 363 aa10.54□□□□□ -0.72
SNX13-212ENST00000498463 SLC5A5Q92911 643 aa10.54□□□□□ -0.72
SNX13-212ENST00000498463 FAXDC2Q96IV6 333 aa10.54□□□□□ -0.72
SNX13-212ENST00000498463 ANLNQ9NQW6 1124 aa10.54□□□□□ -0.72
SNX13-212ENST00000498463 INTUQ9ULD6 942 aa10.54□□□□□ -0.72
SNX13-212ENST00000498463 DAGLAQ9Y4D2 1042 aa10.54□□□□□ -0.72
SNX13-212ENST00000498463 A0A0A0MRY4 1105 aa10.53□□□□□ -0.72
SNX13-212ENST00000498463 PTPDC1A2A3K4 754 aa10.53□□□□□ -0.72
SNX13-212ENST00000498463 RBAK-RBAKDNI3L0D1 243 aa10.53□□□□□ -0.72
SNX13-212ENST00000498463 LPOP22079 712 aaPredicted RBP10.53□□□□□ -0.72
SNX13-212ENST00000498463 CTSKP43235 329 aa10.53□□□□□ -0.72
SNX13-212ENST00000498463 RAC1P63000 192 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms