RNA–Protein interactions for RNA: ENST00000498280.1

RBM39-242, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-242ENST00000498280 CARFQ8N187 725 aa4.32□□□□□ -1.72
RBM39-242ENST00000498280 FIBCD1Q8N539 461 aa4.32□□□□□ -1.72
RBM39-242ENST00000498280 DDX1Q92499 740 aaKnown RBP4.32□□□□□ -1.72
RBM39-242ENST00000498280 LOXL4Q96JB6 756 aa4.32□□□□□ -1.72
RBM39-242ENST00000498280 ZDHHC15Q96MV8 337 aa4.32□□□□□ -1.72
RBM39-242ENST00000498280 SAMD11Q96NU1 681 aa4.32□□□□□ -1.72
RBM39-242ENST00000498280 SRRTQ9BXP5 876 aaKnown RBP4.32□□□□□ -1.72
RBM39-242ENST00000498280 KRTAP3-1Q9BYR8 98 aa4.32□□□□□ -1.72
RBM39-242ENST00000498280 NOL6Q9H6R4 1146 aaKnown RBP4.32□□□□□ -1.72
RBM39-242ENST00000498280 PDLIM7Q9NR12 457 aa4.32□□□□□ -1.72
RBM39-242ENST00000498280 PCDHGB7Q9Y5F8 929 aa4.32□□□□□ -1.72
RBM39-242ENST00000498280 ZBTB7CA1YPR0 619 aa4.31□□□□□ -1.72
RBM39-242ENST00000498280 CYR61O00622 381 aa4.31□□□□□ -1.72
RBM39-242ENST00000498280 CBFA2T2O43439 604 aa4.31□□□□□ -1.72
RBM39-242ENST00000498280 NOBOXO60393 691 aa4.31□□□□□ -1.72
RBM39-242ENST00000498280 ASGR2P07307 311 aa4.31□□□□□ -1.72
RBM39-242ENST00000498280 CD3EP07766 207 aa4.31□□□□□ -1.72
RBM39-242ENST00000498280 NCAM1P13591 858 aa4.31□□□□□ -1.72
RBM39-242ENST00000498280 PPP2R5DQ14738 602 aa4.31□□□□□ -1.72
RBM39-242ENST00000498280 ANKRD39Q53RE8 183 aa4.31□□□□□ -1.72
RBM39-242ENST00000498280 NOL9Q5SY16 702 aaKnown RBP4.31□□□□□ -1.72
RBM39-242ENST00000498280 CWF19L1Q69YN2 538 aaKnown RBP4.31□□□□□ -1.72
RBM39-242ENST00000498280 CYP2R1Q6VVX0 501 aa4.31□□□□□ -1.72
RBM39-242ENST00000498280 ADCY4Q8NFM4 1077 aa4.31□□□□□ -1.72
RBM39-242ENST00000498280 DHRS1Q96LJ7 313 aa4.31□□□□□ -1.72
RBM39-242ENST00000498280 C8orf49Q96NF6 230 aa4.31□□□□□ -1.72
RBM39-242ENST00000498280 PTCHD1Q96NR3 888 aa4.31□□□□□ -1.72
RBM39-242ENST00000498280 BCL2L13Q9BXK5 485 aa4.31□□□□□ -1.72
RBM39-242ENST00000498280 PRR13Q9NZ81 148 aa4.31□□□□□ -1.72
RBM39-242ENST00000498280 NTMQ9P121 344 aa4.31□□□□□ -1.72
RBM39-242ENST00000498280 DBR1Q9UK59 544 aaKnown RBP4.31□□□□□ -1.72
RBM39-242ENST00000498280 VAMP4O75379 141 aa4.3□□□□□ -1.72
RBM39-242ENST00000498280 PMLP29590 882 aa4.3□□□□□ -1.72
RBM39-242ENST00000498280 USP51Q70EK9 711 aa4.3□□□□□ -1.72
RBM39-242ENST00000498280 TMEM87AQ8NBN3 555 aa4.3□□□□□ -1.72
RBM39-242ENST00000498280 CHST13Q8NET6 341 aa4.3□□□□□ -1.72
RBM39-242ENST00000498280 MENTQ9BUN1 341 aa4.3□□□□□ -1.72
RBM39-242ENST00000498280 SCAND2PQ9GZW5 306 aaPredicted RBP4.3□□□□□ -1.72
RBM39-242ENST00000498280 SLITRK6Q9H5Y7 841 aa4.3□□□□□ -1.72
RBM39-242ENST00000498280 SPATA6Q9NWH7 488 aaPredicted RBP4.3□□□□□ -1.72
RBM39-242ENST00000498280 PCDHB10Q9UN67 800 aa4.3□□□□□ -1.72
RBM39-242ENST00000498280 PLATP00750 562 aa4.29□□□□□ -1.72
RBM39-242ENST00000498280 GLI4P10075 376 aa4.29□□□□□ -1.72
RBM39-242ENST00000498280 CORO7P57737 925 aa4.29□□□□□ -1.72
RBM39-242ENST00000498280 RACK1P63244 317 aaKnown RBP4.29□□□□□ -1.72
RBM39-242ENST00000498280 DPY19L1Q2PZI1 675 aa4.29□□□□□ -1.72
RBM39-242ENST00000498280 FBXW10Q5XX13 1052 aa4.29□□□□□ -1.72
RBM39-242ENST00000498280 CCDC81Q6ZN84 652 aa4.29□□□□□ -1.72
RBM39-242ENST00000498280 B3GNT8Q7Z7M8 397 aa4.29□□□□□ -1.72
RBM39-242ENST00000498280 CPNE8Q86YQ8 564 aa4.29□□□□□ -1.72
RBM39-242ENST00000498280 ALG3Q92685 438 aa4.29□□□□□ -1.72
RBM39-242ENST00000498280 DVL3Q92997 716 aaPredicted RBP4.29□□□□□ -1.72
RBM39-242ENST00000498280 FERD3LQ96RJ6 166 aa4.29□□□□□ -1.72
RBM39-242ENST00000498280 RBM15Q96T37 977 aaKnown RBP eCLIP4.29□□□□□ -1.72
RBM39-242ENST00000498280 MRIQ9BWK5 157 aa4.29□□□□□ -1.72
RBM39-242ENST00000498280 ZNF214Q9UL59 606 aaPredicted RBP4.29□□□□□ -1.72
RBM39-242ENST00000498280 RWDD3Q9Y3V2 267 aa4.29□□□□□ -1.72
RBM39-242ENST00000498280 FHOD1Q9Y613 1164 aa4.29□□□□□ -1.72
RBM39-242ENST00000498280 STXBP3O00186 592 aa4.28□□□□□ -1.72
RBM39-242ENST00000498280 L1CAMP32004 1257 aa4.28□□□□□ -1.72
RBM39-242ENST00000498280 SARSP49591 514 aaKnown RBP4.28□□□□□ -1.72
RBM39-242ENST00000498280 TTLL7Q6ZT98 887 aa4.28□□□□□ -1.72
RBM39-242ENST00000498280 CABP7Q86V35 215 aa4.28□□□□□ -1.72
RBM39-242ENST00000498280 SMARCC2Q8TAQ2 1214 aa4.28□□□□□ -1.72
RBM39-242ENST00000498280 KISS1RQ969F8 398 aaPredicted RBP4.28□□□□□ -1.72
RBM39-242ENST00000498280 PODXL2Q9NZ53 605 aa4.28□□□□□ -1.72
RBM39-242ENST00000498280 SIT1Q9Y3P8 196 aa4.28□□□□□ -1.72
RBM39-242ENST00000498280 GUCY2CP25092 1073 aa4.27□□□□□ -1.73
RBM39-242ENST00000498280 USP48Q86UV5 1035 aa4.27□□□□□ -1.73
RBM39-242ENST00000498280 ZNF761Q86XN6 746 aaPredicted RBP4.27□□□□□ -1.73
RBM39-242ENST00000498280 TAB3Q8N5C8 712 aaPredicted RBP4.27□□□□□ -1.73
RBM39-242ENST00000498280 RGS22Q8NE09 1264 aa4.27□□□□□ -1.73
RBM39-242ENST00000498280 NLGN2Q8NFZ4 835 aa4.27□□□□□ -1.73
RBM39-242ENST00000498280 FGD4Q96M96 766 aa4.27□□□□□ -1.73
RBM39-242ENST00000498280 TM9SF2Q99805 663 aa4.27□□□□□ -1.73
RBM39-242ENST00000498280 MTA3Q9BTC8 594 aa4.27□□□□□ -1.73
RBM39-242ENST00000498280 BACH2Q9BYV9 841 aa4.27□□□□□ -1.73
RBM39-242ENST00000498280 GULP1Q9UBP9 304 aa4.27□□□□□ -1.73
RBM39-242ENST00000498280 AURKAO14965 403 aa4.26□□□□□ -1.73
RBM39-242ENST00000498280 SMARCA5O60264 1052 aaPredicted RBP4.26□□□□□ -1.73
RBM39-242ENST00000498280 FZD7O75084 574 aa4.26□□□□□ -1.73
RBM39-242ENST00000498280 SLPIP03973 132 aa4.26□□□□□ -1.73
RBM39-242ENST00000498280 ITGA4P13612 1032 aa4.26□□□□□ -1.73
RBM39-242ENST00000498280 ERCC3P19447 782 aa4.26□□□□□ -1.73
RBM39-242ENST00000498280 NOP2P46087 812 aaKnown RBP4.26□□□□□ -1.73
RBM39-242ENST00000498280 FANCCQ00597 558 aa4.26□□□□□ -1.73
RBM39-242ENST00000498280 POU4F1Q01851 419 aa4.26□□□□□ -1.73
RBM39-242ENST00000498280 SMAD4Q13485 552 aaKnown RBP4.26□□□□□ -1.73
RBM39-242ENST00000498280 CRB2Q5IJ48 1285 aa4.26□□□□□ -1.73
RBM39-242ENST00000498280 MBLAC2Q68D91 279 aa4.26□□□□□ -1.73
RBM39-242ENST00000498280 BORAQ6PGQ7 559 aa4.26□□□□□ -1.73
RBM39-242ENST00000498280 CRIP3Q6Q6R5 217 aa4.26□□□□□ -1.73
RBM39-242ENST00000498280 FAM124AQ86V42 546 aa4.26□□□□□ -1.73
RBM39-242ENST00000498280 LGI4Q8N135 537 aa4.26□□□□□ -1.73
RBM39-242ENST00000498280 RBBP8NLQ8NC74 664 aaPredicted RBP4.26□□□□□ -1.73
RBM39-242ENST00000498280 SH3RF3Q8TEJ3 882 aaPredicted RBP4.26□□□□□ -1.73
RBM39-242ENST00000498280 DDX11Q96FC9 970 aa4.26□□□□□ -1.73
RBM39-242ENST00000498280 HAUS7Q99871 368 aa4.26□□□□□ -1.73
RBM39-242ENST00000498280 KLHL25Q9H0H3 589 aa4.26□□□□□ -1.73
RBM39-242ENST00000498280 GINM1Q9NU53 330 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms