RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 ARHGAP39Q9C0H5 1083 aa13.16□□□□□ -0.3
CTTN-208ENST00000498223 PSTPIP2Q9H939 334 aa13.16□□□□□ -0.3
CTTN-208ENST00000498223 C6orf50Q9HD87 102 aa13.16□□□□□ -0.3
CTTN-208ENST00000498223 RBM19Q9Y4C8 960 aaKnown RBP13.16□□□□□ -0.3
CTTN-208ENST00000498223 SLC15A5A6NIM6 579 aa13.15□□□□□ -0.3
CTTN-208ENST00000498223 H3BQV1 296 aa13.15□□□□□ -0.3
CTTN-208ENST00000498223 GCOM1H8Y6P7 765 aaPredicted RBP13.15□□□□□ -0.3
CTTN-208ENST00000498223 STRNO43815 780 aa13.15□□□□□ -0.3
CTTN-208ENST00000498223 POLR2MP0CAP2 368 aa13.15□□□□□ -0.3
CTTN-208ENST00000498223 HOXD10P28358 340 aa13.15□□□□□ -0.3
CTTN-208ENST00000498223 MRPL12P52815 198 aaKnown RBP13.15□□□□□ -0.3
CTTN-208ENST00000498223 GUCY1B3Q02153 619 aa13.15□□□□□ -0.3
CTTN-208ENST00000498223 PPP1R18Q6NYC8 613 aa13.15□□□□□ -0.3
CTTN-208ENST00000498223 DPP9Q86TI2 863 aa13.15□□□□□ -0.3
CTTN-208ENST00000498223 CLEC4DQ8WXI8 215 aa13.15□□□□□ -0.3
CTTN-208ENST00000498223 NUDT12Q9BQG2 462 aa13.15□□□□□ -0.3
CTTN-208ENST00000498223 SH3GLB2Q9NR46 395 aa13.15□□□□□ -0.3
CTTN-208ENST00000498223 PTPN22Q9Y2R2 807 aa13.15□□□□□ -0.3
CTTN-208ENST00000498223 KIAA1217Q5T5P2 1943 aa13.15□□□□□ -0.3
CTTN-208ENST00000498223 PFASO15067 1338 aa13.14□□□□□ -0.31
CTTN-208ENST00000498223 POTEB2H3BUK9 544 aa13.14□□□□□ -0.31
CTTN-208ENST00000498223 PTPREP23469 700 aa13.14□□□□□ -0.31
CTTN-208ENST00000498223 GNA11P29992 359 aa13.14□□□□□ -0.31
CTTN-208ENST00000498223 HOXA13P31271 388 aaPredicted RBP13.14□□□□□ -0.31
CTTN-208ENST00000498223 GNL2Q13823 731 aaKnown RBP13.14□□□□□ -0.31
CTTN-208ENST00000498223 BAATQ14032 418 aaPredicted RBP13.14□□□□□ -0.31
CTTN-208ENST00000498223 LARP1BQ659C4 914 aaKnown RBP13.14□□□□□ -0.31
CTTN-208ENST00000498223 FCHSD1Q86WN1 690 aa13.14□□□□□ -0.31
CTTN-208ENST00000498223 TBC1D5Q92609 795 aa13.14□□□□□ -0.31
CTTN-208ENST00000498223 TRIM47Q96LD4 638 aa13.14□□□□□ -0.31
CTTN-208ENST00000498223 GLT8D2Q9H1C3 349 aa13.14□□□□□ -0.31
CTTN-208ENST00000498223 BRMS1Q9HCU9 246 aa13.14□□□□□ -0.31
CTTN-208ENST00000498223 A1CFQ9NQ94 594 aaKnown RBP13.14□□□□□ -0.31
CTTN-208ENST00000498223 SLC5A4Q9NY91 659 aa13.14□□□□□ -0.31
CTTN-208ENST00000498223 KCNJ14Q9UNX9 436 aa13.14□□□□□ -0.31
CTTN-208ENST00000498223 ZNF236Q9UL36 1845 aa13.13□□□□□ -0.31
CTTN-208ENST00000498223 PGK2P07205 417 aa13.13□□□□□ -0.31
CTTN-208ENST00000498223 CYP2B6P20813 491 aa13.13□□□□□ -0.31
CTTN-208ENST00000498223 ADORA2AP29274 412 aa13.13□□□□□ -0.31
CTTN-208ENST00000498223 RPS6P62753 249 aaKnown RBP13.13□□□□□ -0.31
CTTN-208ENST00000498223 SAFBQ15424 915 aaKnown RBP eCLIP13.13□□□□□ -0.31
CTTN-208ENST00000498223 UBE2SQ16763 222 aa13.13□□□□□ -0.31
CTTN-208ENST00000498223 KRT40Q6A162 431 aa13.13□□□□□ -0.31
CTTN-208ENST00000498223 TYW1BQ6NUM6 668 aa13.13□□□□□ -0.31
CTTN-208ENST00000498223 SLC30A10Q6XR72 485 aa13.13□□□□□ -0.31
CTTN-208ENST00000498223 SAMD3Q8N6K7 520 aa13.13□□□□□ -0.31
CTTN-208ENST00000498223 BICD2Q8TD16 824 aa13.13□□□□□ -0.31
CTTN-208ENST00000498223 SOCS4Q8WXH5 440 aa13.13□□□□□ -0.31
CTTN-208ENST00000498223 ARMC5Q96C12 935 aa13.13□□□□□ -0.31
CTTN-208ENST00000498223 RIC8AQ9NPQ8 531 aa13.13□□□□□ -0.31
CTTN-208ENST00000498223 CYP39A1Q9NYL5 469 aa13.13□□□□□ -0.31
CTTN-208ENST00000498223 BIN2Q9UBW5 565 aaPredicted RBP13.13□□□□□ -0.31
CTTN-208ENST00000498223 HTTP42858 3142 aa13.13□□□□□ -0.31
CTTN-208ENST00000498223 ESYT2A0FGR8 921 aa13.12□□□□□ -0.31
CTTN-208ENST00000498223 GNRH1P01148 92 aa13.12□□□□□ -0.31
CTTN-208ENST00000498223 PDCP20941 246 aa13.12□□□□□ -0.31
CTTN-208ENST00000498223 CTGFP29279 349 aa13.12□□□□□ -0.31
CTTN-208ENST00000498223 RGS2P41220 211 aa13.12□□□□□ -0.31
CTTN-208ENST00000498223 CAP1Q01518 475 aa13.12□□□□□ -0.31
CTTN-208ENST00000498223 MAP2K5Q13163 448 aa13.12□□□□□ -0.31
CTTN-208ENST00000498223 GRB14Q14449 540 aa13.12□□□□□ -0.31
CTTN-208ENST00000498223 JAKMIP3Q5VZ66 844 aa13.12□□□□□ -0.31
CTTN-208ENST00000498223 USP17L6PQ6QN14 398 aa13.12□□□□□ -0.31
CTTN-208ENST00000498223 ABRAQ8N0Z2 381 aa13.12□□□□□ -0.31
CTTN-208ENST00000498223 RGS22Q8NE09 1264 aa13.12□□□□□ -0.31
CTTN-208ENST00000498223 ZMYND12Q9H0C1 365 aa13.12□□□□□ -0.31
CTTN-208ENST00000498223 EHMT1Q9H9B1 1298 aa13.12□□□□□ -0.31
CTTN-208ENST00000498223 GJB4Q9NTQ9 266 aa13.12□□□□□ -0.31
CTTN-208ENST00000498223 PCDHA4Q9UN74 947 aa13.12□□□□□ -0.31
CTTN-208ENST00000498223 PDE4DIPQ5VU43 2346 aa13.12□□□□□ -0.31
CTTN-208ENST00000498223 VPS37CA5D8V6 355 aaPredicted RBP13.11□□□□□ -0.31
CTTN-208ENST00000498223 SPDYE3A6NKU9 549 aa13.11□□□□□ -0.31
CTTN-208ENST00000498223 OPLAHO14841 1288 aa13.11□□□□□ -0.31
CTTN-208ENST00000498223 KRT2P35908 639 aa13.11□□□□□ -0.31
CTTN-208ENST00000498223 HSD17B4P51659 736 aa13.11□□□□□ -0.31
CTTN-208ENST00000498223 CNTN2Q02246 1040 aa13.11□□□□□ -0.31
CTTN-208ENST00000498223 MCTP1Q6DN14 999 aa13.11□□□□□ -0.31
CTTN-208ENST00000498223 GALNT17Q6IS24 598 aa13.11□□□□□ -0.31
CTTN-208ENST00000498223 BLIDQ8IZY5 108 aa13.11□□□□□ -0.31
CTTN-208ENST00000498223 FAM177A1Q8N128 213 aaPredicted RBP13.11□□□□□ -0.31
CTTN-208ENST00000498223 REXO1Q8N1G1 1221 aaKnown RBP13.11□□□□□ -0.31
CTTN-208ENST00000498223 RAET1EQ8TD07 263 aa13.11□□□□□ -0.31
CTTN-208ENST00000498223 MPHOSPH6Q99547 160 aaKnown RBP13.11□□□□□ -0.31
CTTN-208ENST00000498223 PHF20Q9BVI0 1012 aa13.11□□□□□ -0.31
CTTN-208ENST00000498223 MAP3K20Q9NYL2 800 aaKnown RBP13.11□□□□□ -0.31
CTTN-208ENST00000498223 SRRDQ9UH36 339 aa13.11□□□□□ -0.31
CTTN-208ENST00000498223 GABRQQ9UN88 632 aa13.11□□□□□ -0.31
CTTN-208ENST00000498223 MYH15Q9Y2K3 1946 aa13.11□□□□□ -0.31
CTTN-208ENST00000498223 TNRC18O15417 2968 aaPredicted RBP13.11□□□□□ -0.31
CTTN-208ENST00000498223 B4DLN1 442 aa13.1□□□□□ -0.31
CTTN-208ENST00000498223 COBLO75128 1261 aa13.1□□□□□ -0.31
CTTN-208ENST00000498223 MMP1P03956 469 aa13.1□□□□□ -0.31
CTTN-208ENST00000498223 FLT3LGP49771 235 aa13.1□□□□□ -0.31
CTTN-208ENST00000498223 PRKCZQ05513 592 aa13.1□□□□□ -0.31
CTTN-208ENST00000498223 MORN1Q5T089 497 aa13.1□□□□□ -0.31
CTTN-208ENST00000498223 PRPF38BQ5VTL8 546 aaKnown RBP13.1□□□□□ -0.31
CTTN-208ENST00000498223 ARHGEF16Q5VV41 709 aa13.1□□□□□ -0.31
CTTN-208ENST00000498223 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.1□□□□□ -0.311e-7■□□□□ 10.1
CTTN-208ENST00000498223 RASGRP4Q8TDF6 673 aa13.1□□□□□ -0.31
CTTN-208ENST00000498223 SYTL5Q8TDW5 730 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms