RNA–Protein interactions for RNA: ENST00000497886.5

TSC2-216, Transcript of TSC complex subunit 2, humanhuman

TSL 2

Gene TSC2, Length 3,248 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-216ENST00000497886 COG1Q8WTW3 980 aa15.16■□□□□ 0.02
TSC2-216ENST00000497886 SMARCC1Q92922 1105 aaPredicted RBP15.16■□□□□ 0.02
TSC2-216ENST00000497886 EYA3Q99504 573 aa15.16■□□□□ 0.02
TSC2-216ENST00000497886 MTA3Q9BTC8 594 aa15.16■□□□□ 0.02
TSC2-216ENST00000497886 CAPN6Q9Y6Q1 641 aa15.16■□□□□ 0.02
TSC2-216ENST00000497886 DUOX1Q9NRD9 1551 aa15.16■□□□□ 0.02
TSC2-216ENST00000497886 ACTN2P35609 894 aa15.15■□□□□ 0.02
TSC2-216ENST00000497886 KRT83P78385 493 aa15.15■□□□□ 0.02
TSC2-216ENST00000497886 AMPD2Q01433 879 aa15.15■□□□□ 0.02
TSC2-216ENST00000497886 TTI2Q6NXR4 508 aa15.15■□□□□ 0.02
TSC2-216ENST00000497886 SECISBP2LQ93073 1101 aaKnown RBP15.15■□□□□ 0.02
TSC2-216ENST00000497886 EXOC4Q96A65 974 aa15.15■□□□□ 0.02
TSC2-216ENST00000497886 IFIH1Q9BYX4 1025 aaKnown RBP15.15■□□□□ 0.02
TSC2-216ENST00000497886 UBXN6Q9BZV1 441 aa15.15■□□□□ 0.02
TSC2-216ENST00000497886 TRIM9Q9C026 710 aa15.15■□□□□ 0.02
TSC2-216ENST00000497886 GBP3Q9H0R5 595 aa15.15■□□□□ 0.02
TSC2-216ENST00000497886 CWC15Q9P013 229 aaKnown RBP15.15■□□□□ 0.02
TSC2-216ENST00000497886 STXBP3O00186 592 aa15.15■□□□□ 0.02
TSC2-216ENST00000497886 GGCXP38435 758 aa15.15■□□□□ 0.02
TSC2-216ENST00000497886 NONOQ15233 471 aaKnown RBP eCLIP15.15■□□□□ 0.021e-6■■■■□ 23.2
TSC2-216ENST00000497886 C12orf60Q5U649 245 aa15.15■□□□□ 0.02
TSC2-216ENST00000497886 CAPN11Q9UMQ6 739 aa15.15■□□□□ 0.02
TSC2-216ENST00000497886 LRRC10BA6NIK2 292 aa15.15■□□□□ 0.02
TSC2-216ENST00000497886 MYO1CO00159 1063 aa15.15■□□□□ 0.02
TSC2-216ENST00000497886 TDP2O95551 362 aa15.15■□□□□ 0.02
TSC2-216ENST00000497886 UBE2SQ16763 222 aa15.15■□□□□ 0.02
TSC2-216ENST00000497886 TRAPPC11Q7Z392 1133 aa15.15■□□□□ 0.02
TSC2-216ENST00000497886 PROCA1Q8NCQ7 364 aaPredicted RBP15.15■□□□□ 0.02
TSC2-216ENST00000497886 RRP36Q96EU6 259 aaKnown RBP15.15■□□□□ 0.02
TSC2-216ENST00000497886 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.15■□□□□ 0.02
TSC2-216ENST00000497886 EHD4Q9H223 541 aa15.15■□□□□ 0.02
TSC2-216ENST00000497886 EIF4A3P38919 411 aaKnown RBP15.14■□□□□ 0.01
TSC2-216ENST00000497886 USP14P54578 494 aa15.14■□□□□ 0.01
TSC2-216ENST00000497886 ARL6IP4Q66PJ3 421 aaKnown RBP15.14■□□□□ 0.01
TSC2-216ENST00000497886 CALML4Q96GE6 196 aa15.14■□□□□ 0.01
TSC2-216ENST00000497886 RAB21Q9UL25 225 aa15.14■□□□□ 0.01
TSC2-216ENST00000497886 PACSIN2Q9UNF0 486 aaPredicted RBP15.14■□□□□ 0.01
TSC2-216ENST00000497886 USP17L5A8MUK1 530 aa15.14■□□□□ 0.01
TSC2-216ENST00000497886 RASSF7Q02833 373 aa15.14■□□□□ 0.01
TSC2-216ENST00000497886 GFPT1Q06210 699 aaPredicted RBP15.14■□□□□ 0.01
TSC2-216ENST00000497886 AMIGO3Q86WK7 504 aa15.14■□□□□ 0.01
TSC2-216ENST00000497886 TEX11Q8IYF3 940 aa15.14■□□□□ 0.01
TSC2-216ENST00000497886 GIMAP8Q8ND71 665 aaPredicted RBP15.14■□□□□ 0.01
TSC2-216ENST00000497886 MS4A14Q96JA4 679 aa15.14■□□□□ 0.01
TSC2-216ENST00000497886 NUDT12Q9BQG2 462 aa15.14■□□□□ 0.01
TSC2-216ENST00000497886 ACBD3Q9H3P7 528 aa15.14■□□□□ 0.01
TSC2-216ENST00000497886 RRP15Q9Y3B9 282 aaKnown RBP15.14■□□□□ 0.01
TSC2-216ENST00000497886 MYH10P35580 1976 aa15.14■□□□□ 0.01
TSC2-216ENST00000497886 MYH14Q7Z406 1995 aaKnown RBP15.13■□□□□ 0.01
TSC2-216ENST00000497886 ESYT3A0FGR9 886 aa15.13■□□□□ 0.01
TSC2-216ENST00000497886 EEF1GP26641 437 aaKnown RBP15.13■□□□□ 0.01
TSC2-216ENST00000497886 SLC16A2P36021 539 aa15.13■□□□□ 0.01
TSC2-216ENST00000497886 SAMD1Q6SPF0 538 aaPredicted RBP15.13■□□□□ 0.01
TSC2-216ENST00000497886 PYM1Q9BRP8 204 aaKnown RBP15.13■□□□□ 0.01
TSC2-216ENST00000497886 FEZ2Q9UHY8 353 aaPredicted RBP15.13■□□□□ 0.01
TSC2-216ENST00000497886 BTDP43251 543 aa15.13■□□□□ 0.01
TSC2-216ENST00000497886 KIAA0895Q8NCT3 520 aa15.13■□□□□ 0.01
TSC2-216ENST00000497886 GOLGA5Q8TBA6 731 aa15.13■□□□□ 0.01
TSC2-216ENST00000497886 IFT81Q8WYA0 676 aa15.13■□□□□ 0.01
TSC2-216ENST00000497886 LRRC1Q9BTT6 524 aa15.13■□□□□ 0.01
TSC2-216ENST00000497886 BARHL2Q9NY43 387 aa15.13■□□□□ 0.01
TSC2-216ENST00000497886 PDS5AQ29RF7 1337 aaKnown RBP15.13■□□□□ 0.01
TSC2-216ENST00000497886 RASSF10A6NK89 507 aa15.13■□□□□ 0.01
TSC2-216ENST00000497886 MPHOSPH10O00566 681 aaKnown RBP15.13■□□□□ 0.01
TSC2-216ENST00000497886 ZNF263O14978 683 aa15.13■□□□□ 0.01
TSC2-216ENST00000497886 CCNE1P24864 410 aa15.13■□□□□ 0.01
TSC2-216ENST00000497886 KCTD16Q68DU8 428 aa15.13■□□□□ 0.01
TSC2-216ENST00000497886 NEK8Q86SG6 692 aa15.13■□□□□ 0.01
TSC2-216ENST00000497886 ZNF507Q8TCN5 953 aa15.13■□□□□ 0.01
TSC2-216ENST00000497886 AFAP1L1Q8TED9 768 aa15.13■□□□□ 0.01
TSC2-216ENST00000497886 CEP95Q96GE4 821 aa15.13■□□□□ 0.01
TSC2-216ENST00000497886 SELENOOQ9BVL4 669 aa15.13■□□□□ 0.01
TSC2-216ENST00000497886 CENPHQ9H3R5 247 aa15.13■□□□□ 0.01
TSC2-216ENST00000497886 SEMA6BQ9H3T3 888 aa15.13■□□□□ 0.01
TSC2-216ENST00000497886 DMGDHQ9UI17 866 aaKnown RBP15.13■□□□□ 0.01
TSC2-216ENST00000497886 LRRC53A6NM62 1247 aa15.12■□□□□ 0.01
TSC2-216ENST00000497886 RIMBP2O15034 1052 aa15.12■□□□□ 0.01
TSC2-216ENST00000497886 SRGNP10124 158 aa15.12■□□□□ 0.01
TSC2-216ENST00000497886 GRM4Q14833 912 aa15.12■□□□□ 0.01
TSC2-216ENST00000497886 SF3B3Q15393 1217 aaKnown RBP15.12■□□□□ 0.01
TSC2-216ENST00000497886 SNX29Q8TEQ0 813 aa15.12■□□□□ 0.01
TSC2-216ENST00000497886 THAP9Q9H5L6 903 aa15.12■□□□□ 0.01
TSC2-216ENST00000497886 C6orf50Q9HD87 102 aa15.12■□□□□ 0.01
TSC2-216ENST00000497886 RHOBTB3O94955 611 aa15.12■□□□□ 0.01
TSC2-216ENST00000497886 BAG3O95817 575 aa15.12■□□□□ 0.01
TSC2-216ENST00000497886 CCDC40Q4G0X9 1142 aa15.12■□□□□ 0.01
TSC2-216ENST00000497886 CT47A1Q5JQC4 288 aaPredicted RBP15.12■□□□□ 0.01
TSC2-216ENST00000497886 TPTE2Q6XPS3 522 aa15.12■□□□□ 0.01
TSC2-216ENST00000497886 DNAJC7Q99615 494 aa15.12■□□□□ 0.01
TSC2-216ENST00000497886 KBTBD4Q9NVX7 518 aa15.12■□□□□ 0.01
TSC2-216ENST00000497886 MYMKA6NI61 221 aa15.11■□□□□ 0.01
TSC2-216ENST00000497886 SLC37A4O43826 429 aa15.11■□□□□ 0.01
TSC2-216ENST00000497886 CALCRLQ16602 461 aa15.11■□□□□ 0.01
TSC2-216ENST00000497886 SV2BQ7L1I2 683 aa15.11■□□□□ 0.01
TSC2-216ENST00000497886 REXO1Q8N1G1 1221 aaKnown RBP15.11■□□□□ 0.01
TSC2-216ENST00000497886 TIAM2Q8IVF5 1701 aa15.11■□□□□ 0.01
TSC2-216ENST00000497886 RASA1P20936 1047 aa15.11■□□□□ 0.01
TSC2-216ENST00000497886 MAGEA1P43355 309 aa15.11■□□□□ 0.01
TSC2-216ENST00000497886 CDK8P49336 464 aa15.11■□□□□ 0.01
TSC2-216ENST00000497886 KIF11P52732 1056 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms