RNA–Protein interactions for RNA: ENST00000497658.5

PHC3-217, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best) BASIC

Gene PHC3, Length 2,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-217ENST00000497658 ARID4AP29374 1257 aaPredicted RBP6.32□□□□□ -1.4
PHC3-217ENST00000497658 HNRNPH1P31943 449 aaKnown RBP6.32□□□□□ -1.4
PHC3-217ENST00000497658 MAP2K2P36507 400 aa6.32□□□□□ -1.4
PHC3-217ENST00000497658 ATP2C1P98194 919 aaPredicted RBP6.32□□□□□ -1.4
PHC3-217ENST00000497658 FIGNQ5HY92 759 aa6.32□□□□□ -1.4
PHC3-217ENST00000497658 ARL6IP4Q66PJ3 421 aaKnown RBP6.32□□□□□ -1.4
PHC3-217ENST00000497658 ANKRD18AQ8IVF6 992 aa6.32□□□□□ -1.4
PHC3-217ENST00000497658 ZNF507Q8TCN5 953 aa6.32□□□□□ -1.4
PHC3-217ENST00000497658 CAVIN3Q969G5 261 aa6.32□□□□□ -1.4
PHC3-217ENST00000497658 CABS1Q96KC9 395 aa6.32□□□□□ -1.4
PHC3-217ENST00000497658 RUFY1Q96T51 708 aa6.32□□□□□ -1.4
PHC3-217ENST00000497658 MYL10Q9BUA6 226 aa6.32□□□□□ -1.4
PHC3-217ENST00000497658 ISCA1Q9BUE6 129 aa6.32□□□□□ -1.4
PHC3-217ENST00000497658 PHF20Q9BVI0 1012 aa6.32□□□□□ -1.4
PHC3-217ENST00000497658 THAP9Q9H5L6 903 aa6.32□□□□□ -1.4
PHC3-217ENST00000497658 RNF14Q9UBS8 474 aa6.32□□□□□ -1.4
PHC3-217ENST00000497658 DENND2AQ9ULE3 1009 aa6.32□□□□□ -1.4
PHC3-217ENST00000497658 RIPOR2Q9Y4F9 1068 aa6.32□□□□□ -1.4
PHC3-217ENST00000497658 NUP188Q5SRE5 1749 aa6.32□□□□□ -1.4
PHC3-217ENST00000497658 RTL9Q8NET4 1388 aa6.32□□□□□ -1.4
PHC3-217ENST00000497658 LOC102724159A0A0B4J2E5 919 aa6.32□□□□□ -1.4
PHC3-217ENST00000497658 A0A1W2PQJ5 194 aa6.32□□□□□ -1.4
PHC3-217ENST00000497658 NUTM2BA6NNL0 878 aaPredicted RBP6.32□□□□□ -1.4
PHC3-217ENST00000497658 NUTM2EB1AL46 878 aaPredicted RBP6.32□□□□□ -1.4
PHC3-217ENST00000497658 RNF225M0QZC1 329 aaPredicted RBP6.32□□□□□ -1.4
PHC3-217ENST00000497658 MEFVO15553 781 aaPredicted RBP6.32□□□□□ -1.4
PHC3-217ENST00000497658 PRPF3O43395 683 aaKnown RBP6.32□□□□□ -1.4
PHC3-217ENST00000497658 USO1O60763 962 aaKnown RBP6.32□□□□□ -1.4
PHC3-217ENST00000497658 HSF2BPO75031 334 aa6.32□□□□□ -1.4
PHC3-217ENST00000497658 IDH1O75874 414 aaKnown RBP6.32□□□□□ -1.4
PHC3-217ENST00000497658 IDEP14735 1019 aa6.32□□□□□ -1.4
PHC3-217ENST00000497658 PDE6AP16499 860 aa6.32□□□□□ -1.4
PHC3-217ENST00000497658 TCP1P17987 556 aaKnown RBP6.32□□□□□ -1.4
PHC3-217ENST00000497658 PPP1R2P41236 205 aa6.32□□□□□ -1.4
PHC3-217ENST00000497658 LIG3P49916 1009 aa6.32□□□□□ -1.4
PHC3-217ENST00000497658 HERVK_113P62684 666 aa6.32□□□□□ -1.4
PHC3-217ENST00000497658 MAP3K12Q12852 859 aa6.32□□□□□ -1.4
PHC3-217ENST00000497658 TCIRG1Q13488 830 aa6.32□□□□□ -1.4
PHC3-217ENST00000497658 PLCB4Q15147 1175 aa6.32□□□□□ -1.4
PHC3-217ENST00000497658 PWP2Q15269 919 aaKnown RBP6.32□□□□□ -1.4
PHC3-217ENST00000497658 WDR59Q6PJI9 974 aa6.32□□□□□ -1.4
PHC3-217ENST00000497658 TTLL7Q6ZT98 887 aa6.32□□□□□ -1.4
PHC3-217ENST00000497658 CCDC155Q8N6L0 562 aa6.32□□□□□ -1.4
PHC3-217ENST00000497658 NELFBQ8WX92 580 aa6.32□□□□□ -1.4
PHC3-217ENST00000497658 RIN2Q8WYP3 895 aaPredicted RBP6.32□□□□□ -1.4
PHC3-217ENST00000497658 ARHGEF1Q92888 912 aaKnown RBP6.32□□□□□ -1.4
PHC3-217ENST00000497658 SECISBP2LQ93073 1101 aaKnown RBP6.32□□□□□ -1.4
PHC3-217ENST00000497658 REPIN1Q9BWE0 567 aaKnown RBP6.32□□□□□ -1.4
PHC3-217ENST00000497658 JADE2Q9NQC1 790 aa6.32□□□□□ -1.4
PHC3-217ENST00000497658 TOMM22Q9NS69 142 aa6.32□□□□□ -1.4
PHC3-217ENST00000497658 NLRP2Q9NX02 1062 aa6.32□□□□□ -1.4
PHC3-217ENST00000497658 HDAC6Q9UBN7 1215 aa6.32□□□□□ -1.4
PHC3-217ENST00000497658 GRIN2DO15399 1336 aa6.31□□□□□ -1.4
PHC3-217ENST00000497658 PDS5AQ29RF7 1337 aaKnown RBP6.31□□□□□ -1.4
PHC3-217ENST00000497658 TIAM2Q8IVF5 1701 aa6.31□□□□□ -1.4
PHC3-217ENST00000497658 ANKRD65E5RJM6 399 aa6.31□□□□□ -1.4
PHC3-217ENST00000497658 UBE2Q2LH0YL09 131 aa6.31□□□□□ -1.4
PHC3-217ENST00000497658 NDUFAB1O14561 156 aa6.31□□□□□ -1.4
PHC3-217ENST00000497658 CYP27B1O15528 508 aa6.31□□□□□ -1.4
PHC3-217ENST00000497658 TACC1O75410 805 aa6.31□□□□□ -1.4
PHC3-217ENST00000497658 PARP1P09874 1014 aaKnown RBP6.31□□□□□ -1.4
PHC3-217ENST00000497658 CCDC172P0C7W6 258 aa6.31□□□□□ -1.4
PHC3-217ENST00000497658 CALM1P0DP23 149 aa6.31□□□□□ -1.4
PHC3-217ENST00000497658 CALM2P0DP24 149 aa6.31□□□□□ -1.4
PHC3-217ENST00000497658 CALM3P0DP25 149 aa6.31□□□□□ -1.4
PHC3-217ENST00000497658 SRGNP10124 158 aa6.31□□□□□ -1.4
PHC3-217ENST00000497658 LONP1P36776 959 aaKnown RBP6.31□□□□□ -1.4
PHC3-217ENST00000497658 CEBPAP49715 358 aaPredicted RBP6.31□□□□□ -1.4
PHC3-217ENST00000497658 VAV2P52735 878 aa6.31□□□□□ -1.4
PHC3-217ENST00000497658 GNGT1P63211 74 aa6.31□□□□□ -1.4
PHC3-217ENST00000497658 ZBED6P86452 979 aa6.31□□□□□ -1.4
PHC3-217ENST00000497658 DRP2Q13474 957 aa6.31□□□□□ -1.4
PHC3-217ENST00000497658 KCNB1Q14721 858 aa6.31□□□□□ -1.4
PHC3-217ENST00000497658 SPA17Q15506 151 aa6.31□□□□□ -1.4
PHC3-217ENST00000497658 HSP90AB3PQ58FF7 597 aa6.31□□□□□ -1.4
PHC3-217ENST00000497658 METTL24Q5JXM2 366 aa6.31□□□□□ -1.4
PHC3-217ENST00000497658 PDXDC2PQ6P474 469 aa6.31□□□□□ -1.4
PHC3-217ENST00000497658 TMED8Q6PL24 325 aaPredicted RBP6.31□□□□□ -1.4
PHC3-217ENST00000497658 LDHAL6AQ6ZMR3 332 aa6.31□□□□□ -1.4
PHC3-217ENST00000497658 METTL3Q86U44 580 aaKnown RBP6.31□□□□□ -1.4
PHC3-217ENST00000497658 CREG2Q8IUH2 290 aa6.31□□□□□ -1.4
PHC3-217ENST00000497658 SMYD4Q8IYR2 804 aaPredicted RBP6.31□□□□□ -1.4
PHC3-217ENST00000497658 ZNF654Q8IZM8 581 aa6.31□□□□□ -1.4
PHC3-217ENST00000497658 OTUD6BQ8N6M0 293 aa6.31□□□□□ -1.4
PHC3-217ENST00000497658 ZBTB38Q8NAP3 1195 aaPredicted RBP6.31□□□□□ -1.4
PHC3-217ENST00000497658 C3orf20Q8ND61 904 aa6.31□□□□□ -1.4
PHC3-217ENST00000497658 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.31□□□□□ -1.4
PHC3-217ENST00000497658 KAT2BQ92831 832 aa6.31□□□□□ -1.4
PHC3-217ENST00000497658 PLEKHA4Q9H4M7 779 aa6.31□□□□□ -1.4
PHC3-217ENST00000497658 CXorf56Q9H5V9 222 aa6.31□□□□□ -1.4
PHC3-217ENST00000497658 NHEJ1Q9H9Q4 299 aaPredicted RBP6.31□□□□□ -1.4
PHC3-217ENST00000497658 RBM28Q9NW13 759 aaKnown RBP6.31□□□□□ -1.4
PHC3-217ENST00000497658 TAB2Q9NYJ8 693 aa6.31□□□□□ -1.4
PHC3-217ENST00000497658 STIM2Q9P246 746 aa6.31□□□□□ -1.4
PHC3-217ENST00000497658 MAGEC2Q9UBF1 373 aaPredicted RBP6.31□□□□□ -1.4
PHC3-217ENST00000497658 SNX12Q9UMY4 172 aa6.31□□□□□ -1.4
PHC3-217ENST00000497658 XDHP47989 1333 aa6.31□□□□□ -1.4
PHC3-217ENST00000497658 SOS2Q07890 1332 aaPredicted RBP6.31□□□□□ -1.4
PHC3-217ENST00000497658 PNPLA7Q6ZV29 1317 aa6.31□□□□□ -1.4
PHC3-217ENST00000497658 GLI3P10071 1580 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms