RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 KCNV2Q8TDN2 545 aa14.44□□□□□ -0.1
GAPVD1-220ENST00000497580 RAPGEF5Q92565 580 aa14.44□□□□□ -0.1
GAPVD1-220ENST00000497580 SH2D4AQ9H788 454 aa14.44□□□□□ -0.1
GAPVD1-220ENST00000497580 ZBTB12Q9Y330 459 aaPredicted RBP14.44□□□□□ -0.1
GAPVD1-220ENST00000497580 TATP17735 454 aaPredicted RBP14.44□□□□□ -0.1
GAPVD1-220ENST00000497580 MAGOHP61326 146 aaKnown RBP14.44□□□□□ -0.1
GAPVD1-220ENST00000497580 KRT71Q3SY84 523 aa14.44□□□□□ -0.1
GAPVD1-220ENST00000497580 ZNF658Q5TYW1 1059 aaPredicted RBP14.44□□□□□ -0.1
GAPVD1-220ENST00000497580 SH3RF1Q7Z6J0 888 aa14.44□□□□□ -0.1
GAPVD1-220ENST00000497580 PIK3R5Q8WYR1 880 aa14.44□□□□□ -0.1
GAPVD1-220ENST00000497580 MAGOHBQ96A72 148 aaKnown RBP14.44□□□□□ -0.1
GAPVD1-220ENST00000497580 NLRP3Q96P20 1036 aa14.44□□□□□ -0.1
GAPVD1-220ENST00000497580 NUP58Q9BVL2 599 aa14.44□□□□□ -0.1
GAPVD1-220ENST00000497580 DNM2P50570 870 aa14.44□□□□□ -0.1
GAPVD1-220ENST00000497580 ARID5AQ03989 594 aa14.44□□□□□ -0.1
GAPVD1-220ENST00000497580 IFFO1Q0D2I5 559 aa14.44□□□□□ -0.1
GAPVD1-220ENST00000497580 CCDC57Q2TAC2 916 aa14.44□□□□□ -0.1
GAPVD1-220ENST00000497580 TRPC6Q9Y210 931 aa14.44□□□□□ -0.1
GAPVD1-220ENST00000497580 TLDC2A0PJX2 215 aa14.43□□□□□ -0.1
GAPVD1-220ENST00000497580 DCDC2CA8MYV0 355 aa14.43□□□□□ -0.1
GAPVD1-220ENST00000497580 XBP1P17861 261 aa14.43□□□□□ -0.1
GAPVD1-220ENST00000497580 INHBEP58166 350 aa14.43□□□□□ -0.1
GAPVD1-220ENST00000497580 ZBED6P86452 979 aa14.43□□□□□ -0.1
GAPVD1-220ENST00000497580 GNPTABQ3T906 1256 aa14.43□□□□□ -0.1
GAPVD1-220ENST00000497580 TTC38Q5R3I4 469 aa14.43□□□□□ -0.1
GAPVD1-220ENST00000497580 BZW1Q7L1Q6 419 aaKnown RBP14.43□□□□□ -0.1
GAPVD1-220ENST00000497580 RRAGAQ7L523 313 aa14.43□□□□□ -0.1
GAPVD1-220ENST00000497580 TRIM31Q9BZY9 425 aa14.43□□□□□ -0.1
GAPVD1-220ENST00000497580 ADAMTS13Q76LX8 1427 aa14.43□□□□□ -0.1
GAPVD1-220ENST00000497580 PSMA7O14818 248 aa14.43□□□□□ -0.1
GAPVD1-220ENST00000497580 GTPBP6O43824 516 aaPredicted RBP14.43□□□□□ -0.1
GAPVD1-220ENST00000497580 KRT2P35908 639 aa14.43□□□□□ -0.1
GAPVD1-220ENST00000497580 EHHADHQ08426 723 aa14.43□□□□□ -0.1
GAPVD1-220ENST00000497580 GRIK3Q13003 919 aa14.43□□□□□ -0.1
GAPVD1-220ENST00000497580 RBBP5Q15291 538 aaKnown RBP14.43□□□□□ -0.1
GAPVD1-220ENST00000497580 GLE1Q53GS7 698 aaKnown RBP14.43□□□□□ -0.1
GAPVD1-220ENST00000497580 FAM89AQ96GI7 184 aa14.43□□□□□ -0.1
GAPVD1-220ENST00000497580 MTRQ99707 1265 aa14.43□□□□□ -0.1
GAPVD1-220ENST00000497580 CCDC113Q9H0I3 377 aa14.43□□□□□ -0.1
GAPVD1-220ENST00000497580 SLC39A2Q9NP94 309 aa14.43□□□□□ -0.1
GAPVD1-220ENST00000497580 SALL4Q9UJQ4 1053 aa14.43□□□□□ -0.1
GAPVD1-220ENST00000497580 MTMR7Q9Y216 660 aa14.43□□□□□ -0.1
GAPVD1-220ENST00000497580 CTNND1O60716 968 aaKnown RBP14.43□□□□□ -0.1
GAPVD1-220ENST00000497580 GFPT1Q06210 699 aaPredicted RBP14.43□□□□□ -0.1
GAPVD1-220ENST00000497580 SEMA3FQ13275 785 aa14.43□□□□□ -0.1
GAPVD1-220ENST00000497580 CHADLQ6NUI6 762 aa14.43□□□□□ -0.1
GAPVD1-220ENST00000497580 KCNH5Q8NCM2 988 aa14.43□□□□□ -0.1
GAPVD1-220ENST00000497580 CNOT8Q9UFF9 292 aaKnown RBP14.43□□□□□ -0.1
GAPVD1-220ENST00000497580 V9GY48 417 aaPredicted RBP14.43□□□□□ -0.1
GAPVD1-220ENST00000497580 LRRC37A3O60309 1634 aa14.43□□□□□ -0.1
GAPVD1-220ENST00000497580 PPP4R3AQ6IN85 833 aa14.42□□□□□ -0.1
GAPVD1-220ENST00000497580 PIK3AP1Q6ZUJ8 805 aa14.42□□□□□ -0.1
GAPVD1-220ENST00000497580 CCDC170Q8IYT3 715 aa14.42□□□□□ -0.1
GAPVD1-220ENST00000497580 CRACR2BQ8N4Y2 399 aaPredicted RBP14.42□□□□□ -0.1
GAPVD1-220ENST00000497580 PRCCQ92733 491 aaPredicted RBP14.42□□□□□ -0.1
GAPVD1-220ENST00000497580 ZNF532Q9HCE3 1301 aa14.42□□□□□ -0.1
GAPVD1-220ENST00000497580 MST1RQ04912 1400 aa14.42□□□□□ -0.1
GAPVD1-220ENST00000497580 RAD51CO43502 376 aa14.42□□□□□ -0.1
GAPVD1-220ENST00000497580 HSD17B3P37058 310 aa14.42□□□□□ -0.1
GAPVD1-220ENST00000497580 FOXO4P98177 505 aa14.42□□□□□ -0.1
GAPVD1-220ENST00000497580 SAMD1Q6SPF0 538 aaPredicted RBP14.42□□□□□ -0.1
GAPVD1-220ENST00000497580 MFSD6Q6ZSS7 791 aa14.42□□□□□ -0.1
GAPVD1-220ENST00000497580 SYNE4Q8N205 404 aa14.42□□□□□ -0.1
GAPVD1-220ENST00000497580 MTMR8Q96EF0 704 aa14.42□□□□□ -0.1
GAPVD1-220ENST00000497580 CNOT6LQ96LI5 555 aaKnown RBP14.42□□□□□ -0.1
GAPVD1-220ENST00000497580 TANGO6Q9C0B7 1094 aa14.42□□□□□ -0.1
GAPVD1-220ENST00000497580 TMBIM4Q9HC24 238 aa14.42□□□□□ -0.1
GAPVD1-220ENST00000497580 RMND1Q9NWS8 449 aa14.42□□□□□ -0.1
GAPVD1-220ENST00000497580 CD2APQ9Y5K6 639 aa14.42□□□□□ -0.1
GAPVD1-220ENST00000497580 AKAP12Q02952 1782 aa14.42□□□□□ -0.1
GAPVD1-220ENST00000497580 N4BP2Q86UW6 1770 aaPredicted RBP14.42□□□□□ -0.1
GAPVD1-220ENST00000497580 TRAPPC3O43617 180 aa14.42□□□□□ -0.1
GAPVD1-220ENST00000497580 HOOK2Q96ED9 719 aa14.42□□□□□ -0.1
GAPVD1-220ENST00000497580 TLR10Q9BXR5 811 aa14.42□□□□□ -0.1
GAPVD1-220ENST00000497580 BAZ2BQ9UIF8 2168 aaKnown RBP14.41□□□□□ -0.1
GAPVD1-220ENST00000497580 NKRFO15226 690 aaKnown RBP eCLIP14.41□□□□□ -0.1
GAPVD1-220ENST00000497580 SNRPA1P09661 255 aaKnown RBP14.41□□□□□ -0.1
GAPVD1-220ENST00000497580 IFNAR2P48551 515 aa14.41□□□□□ -0.1
GAPVD1-220ENST00000497580 HLFQ16534 295 aa14.41□□□□□ -0.1
GAPVD1-220ENST00000497580 TAX1BP1Q86VP1 789 aa14.41□□□□□ -0.1
GAPVD1-220ENST00000497580 AGAP11Q8TF27 550 aa14.41□□□□□ -0.1
GAPVD1-220ENST00000497580 NOX5Q96PH1 765 aa14.41□□□□□ -0.1
GAPVD1-220ENST00000497580 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.41□□□□□ -0.1
GAPVD1-220ENST00000497580 IQSEC3Q9UPP2 1182 aaPredicted RBP14.41□□□□□ -0.1
GAPVD1-220ENST00000497580 TBC1D2BQ9UPU7 963 aa14.41□□□□□ -0.1
GAPVD1-220ENST00000497580 C15orf41Q9Y2V0 281 aa14.41□□□□□ -0.1
GAPVD1-220ENST00000497580 PP2D1A8MPX8 630 aa14.41□□□□□ -0.1
GAPVD1-220ENST00000497580 VIMP08670 466 aaKnown RBP14.41□□□□□ -0.1
GAPVD1-220ENST00000497580 PPP2R2AP63151 447 aa14.41□□□□□ -0.1
GAPVD1-220ENST00000497580 CDC37Q16543 378 aaPredicted RBP14.41□□□□□ -0.1
GAPVD1-220ENST00000497580 C11orf91Q3C1V1 193 aa14.41□□□□□ -0.1
GAPVD1-220ENST00000497580 RCSD1Q6JBY9 416 aa14.41□□□□□ -0.1
GAPVD1-220ENST00000497580 TOM1L2Q6ZVM7 507 aa14.41□□□□□ -0.1
GAPVD1-220ENST00000497580 CACNA2D4Q7Z3S7 1137 aa14.41□□□□□ -0.1
GAPVD1-220ENST00000497580 KIF2BQ8N4N8 673 aa14.41□□□□□ -0.1
GAPVD1-220ENST00000497580 CCDC197Q8NCU1 140 aa14.41□□□□□ -0.1
GAPVD1-220ENST00000497580 NLRC4Q9NPP4 1024 aa14.41□□□□□ -0.1
GAPVD1-220ENST00000497580 ETAA1Q9NY74 926 aa14.41□□□□□ -0.1
GAPVD1-220ENST00000497580 ARHGAP20Q9P2F6 1191 aa14.41□□□□□ -0.1
GAPVD1-220ENST00000497580 MINDY4BA8MYZ0 360 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms