RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 YEATS4O95619 227 aa16.23■□□□□ 0.19
VPS26A-209ENST00000497564 HOXA7P31268 230 aaPredicted RBP16.23■□□□□ 0.19
VPS26A-209ENST00000497564 TRAPPC10P48553 1259 aa16.23■□□□□ 0.19
VPS26A-209ENST00000497564 ADCY7P51828 1080 aa16.23■□□□□ 0.19
VPS26A-209ENST00000497564 KIFC2Q96AC6 838 aa16.23■□□□□ 0.19
VPS26A-209ENST00000497564 TFIP11Q9UBB9 837 aaKnown RBP16.23■□□□□ 0.19
VPS26A-209ENST00000497564 PNMA2Q9UL42 364 aa16.23■□□□□ 0.19
VPS26A-209ENST00000497564 PPP1R9AQ9ULJ8 1098 aa16.23■□□□□ 0.19
VPS26A-209ENST00000497564 PCDHA1Q9Y5I3 950 aa16.23■□□□□ 0.19
VPS26A-209ENST00000497564 MORC2Q9Y6X9 1032 aaPredicted RBP16.23■□□□□ 0.19
VPS26A-209ENST00000497564 ADAMTS3O15072 1205 aa16.22■□□□□ 0.19
VPS26A-209ENST00000497564 PRPF40AO75400 957 aaKnown RBP16.22■□□□□ 0.19
VPS26A-209ENST00000497564 TOB1P50616 345 aaPredicted RBP16.22■□□□□ 0.19
VPS26A-209ENST00000497564 SKOR2Q2VWA4 1001 aaPredicted RBP16.22■□□□□ 0.19
VPS26A-209ENST00000497564 ANO1Q5XXA6 986 aa16.22■□□□□ 0.19
VPS26A-209ENST00000497564 KRT25Q7Z3Z0 450 aa16.22■□□□□ 0.19
VPS26A-209ENST00000497564 REXO1Q8N1G1 1221 aaKnown RBP16.22■□□□□ 0.19
VPS26A-209ENST00000497564 SH3TC2Q8TF17 1288 aa16.22■□□□□ 0.19
VPS26A-209ENST00000497564 CUL5Q93034 780 aa16.22■□□□□ 0.19
VPS26A-209ENST00000497564 SPATA32Q96LK8 384 aa16.22■□□□□ 0.19
VPS26A-209ENST00000497564 TANGO6Q9C0B7 1094 aa16.22■□□□□ 0.19
VPS26A-209ENST00000497564 GDPD2Q9HCC8 539 aa16.22■□□□□ 0.19
VPS26A-209ENST00000497564 TXNRD2Q9NNW7 524 aa16.22■□□□□ 0.19
VPS26A-209ENST00000497564 SRRDQ9UH36 339 aa16.22■□□□□ 0.19
VPS26A-209ENST00000497564 PNMA3Q9UL41 463 aa16.22■□□□□ 0.19
VPS26A-209ENST00000497564 NOL7Q9UMY1 257 aaKnown RBP16.22■□□□□ 0.19
VPS26A-209ENST00000497564 PCDHA6Q9UN73 950 aa16.22■□□□□ 0.19
VPS26A-209ENST00000497564 GABRQQ9UN88 632 aa16.22■□□□□ 0.19
VPS26A-209ENST00000497564 PCDHA8Q9Y5H6 950 aa16.22■□□□□ 0.19
VPS26A-209ENST00000497564 USP17L15C9J2P7 530 aa16.21■□□□□ 0.19
VPS26A-209ENST00000497564 USP17L13C9JLJ4 530 aa16.21■□□□□ 0.19
VPS26A-209ENST00000497564 USP17L11C9JVI0 530 aa16.21■□□□□ 0.19
VPS26A-209ENST00000497564 USP17L18D6R9N7 530 aa16.21■□□□□ 0.19
VPS26A-209ENST00000497564 USP17L22D6RA61 530 aa16.21■□□□□ 0.19
VPS26A-209ENST00000497564 USP17L17D6RBQ6 530 aa16.21■□□□□ 0.19
VPS26A-209ENST00000497564 USP17L19D6RCP7 530 aa16.21■□□□□ 0.19
VPS26A-209ENST00000497564 USP17L20D6RJB6 530 aa16.21■□□□□ 0.19
VPS26A-209ENST00000497564 FLOT1O75955 427 aa16.21■□□□□ 0.19
VPS26A-209ENST00000497564 CLK2P49760 499 aaKnown RBP16.21■□□□□ 0.19
VPS26A-209ENST00000497564 RGS19P49795 217 aa16.21■□□□□ 0.19
VPS26A-209ENST00000497564 MRPL12P52815 198 aaKnown RBP16.21■□□□□ 0.19
VPS26A-209ENST00000497564 HERVK_113P62684 666 aa16.21■□□□□ 0.19
VPS26A-209ENST00000497564 IRX3P78415 501 aaPredicted RBP16.21■□□□□ 0.19
VPS26A-209ENST00000497564 PRKCZQ05513 592 aa16.21■□□□□ 0.19
VPS26A-209ENST00000497564 USP17L24Q0WX57 530 aa16.21■□□□□ 0.19
VPS26A-209ENST00000497564 PABPC4Q13310 644 aaKnown RBP eCLIP16.21■□□□□ 0.19
VPS26A-209ENST00000497564 FAM110CQ1W6H9 321 aa16.21■□□□□ 0.19
VPS26A-209ENST00000497564 EARS2Q5JPH6 523 aaKnown RBP16.21■□□□□ 0.19
VPS26A-209ENST00000497564 MCTP2Q6DN12 878 aa16.21■□□□□ 0.19
VPS26A-209ENST00000497564 CATSPERGQ6ZRH7 1159 aa16.21■□□□□ 0.19
VPS26A-209ENST00000497564 LINC00301Q8NCQ3 95 aa16.21■□□□□ 0.19
VPS26A-209ENST00000497564 ARMC5Q96C12 935 aa16.21■□□□□ 0.19
VPS26A-209ENST00000497564 SLC38A10Q9HBR0 1119 aa16.21■□□□□ 0.19
VPS26A-209ENST00000497564 ADAMTS5Q9UNA0 930 aa16.21■□□□□ 0.19
VPS26A-209ENST00000497564 ABCB11O95342 1321 aa16.2■□□□□ 0.18
VPS26A-209ENST00000497564 CCDC194A0A1B0GVG4 234 aa16.2■□□□□ 0.18
VPS26A-209ENST00000497564 MYCP01106 439 aaPredicted RBP16.2■□□□□ 0.18
VPS26A-209ENST00000497564 ICAM1P05362 532 aa16.2■□□□□ 0.18
VPS26A-209ENST00000497564 DSG3P32926 999 aa16.2■□□□□ 0.18
VPS26A-209ENST00000497564 FCGRTP55899 365 aa16.2■□□□□ 0.18
VPS26A-209ENST00000497564 SNAP25P60880 206 aa16.2■□□□□ 0.18
VPS26A-209ENST00000497564 UBE2HP62256 183 aa16.2■□□□□ 0.18
VPS26A-209ENST00000497564 SLC39A14Q15043 492 aa16.2■□□□□ 0.18
VPS26A-209ENST00000497564 ARHGEF6Q15052 776 aa16.2■□□□□ 0.18
VPS26A-209ENST00000497564 KCNG4Q8TDN1 519 aa16.2■□□□□ 0.18
VPS26A-209ENST00000497564 FTOQ9C0B1 505 aaKnown RBP eCLIP16.2■□□□□ 0.18
VPS26A-209ENST00000497564 PSTPIP2Q9H939 334 aa16.2■□□□□ 0.18
VPS26A-209ENST00000497564 CLIC4Q9Y696 253 aa16.2■□□□□ 0.18
VPS26A-209ENST00000497564 ZNF536O15090 1300 aa16.19■□□□□ 0.18
VPS26A-209ENST00000497564 POTEFA5A3E0 1075 aa16.19■□□□□ 0.18
VPS26A-209ENST00000497564 FAM205CA6NFA0 338 aa16.19■□□□□ 0.18
VPS26A-209ENST00000497564 BMP15O95972 392 aa16.19■□□□□ 0.18
VPS26A-209ENST00000497564 MBD3O95983 291 aa16.19■□□□□ 0.18
VPS26A-209ENST00000497564 GCLCP48506 637 aaPredicted RBP16.19■□□□□ 0.18
VPS26A-209ENST00000497564 COG2Q14746 738 aa16.19■□□□□ 0.18
VPS26A-209ENST00000497564 PTPAQ15257 358 aa16.19■□□□□ 0.18
VPS26A-209ENST00000497564 SLC9C1Q4G0N8 1177 aa16.19■□□□□ 0.18
VPS26A-209ENST00000497564 PIK3AP1Q6ZUJ8 805 aa16.19■□□□□ 0.18
VPS26A-209ENST00000497564 RASGRP4Q8TDF6 673 aa16.19■□□□□ 0.18
VPS26A-209ENST00000497564 ZNF333Q96JL9 665 aa16.19■□□□□ 0.18
VPS26A-209ENST00000497564 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.19■□□□□ 0.18
VPS26A-209ENST00000497564 RBPJLQ9UBG7 517 aa16.19■□□□□ 0.18
VPS26A-209ENST00000497564 MORF4L1Q9UBU8 362 aa16.19■□□□□ 0.18
VPS26A-209ENST00000497564 MRPL11Q9Y3B7 192 aaKnown RBP16.19■□□□□ 0.18
VPS26A-209ENST00000497564 LCTP09848 1927 aa16.18■□□□□ 0.18
VPS26A-209ENST00000497564 ZNFX1Q9P2E3 1918 aaKnown RBP16.18■□□□□ 0.18
VPS26A-209ENST00000497564 PIK3CDO00329 1044 aa16.18■□□□□ 0.18
VPS26A-209ENST00000497564 VWA5AO00534 786 aa16.18■□□□□ 0.18
VPS26A-209ENST00000497564 TNPO2O14787 897 aaKnown RBP16.18■□□□□ 0.18
VPS26A-209ENST00000497564 TRAK2O60296 914 aa16.18■□□□□ 0.18
VPS26A-209ENST00000497564 ZBED4O75132 1171 aa16.18■□□□□ 0.18
VPS26A-209ENST00000497564 PPP6R2O75170 966 aa16.18■□□□□ 0.18
VPS26A-209ENST00000497564 GNRH1P01148 92 aa16.18■□□□□ 0.18
VPS26A-209ENST00000497564 OAZ1P54368 228 aa16.18■□□□□ 0.18
VPS26A-209ENST00000497564 CEBPZQ03701 1054 aaKnown RBP16.18■□□□□ 0.18
VPS26A-209ENST00000497564 ORC2Q13416 577 aaPredicted RBP16.18■□□□□ 0.18
VPS26A-209ENST00000497564 NBR1Q14596 966 aa16.18■□□□□ 0.18
VPS26A-209ENST00000497564 STK38Q15208 465 aa16.18■□□□□ 0.18
VPS26A-209ENST00000497564 NONOQ15233 471 aaKnown RBP eCLIP16.18■□□□□ 0.18
VPS26A-209ENST00000497564 SF3A1Q15459 793 aaKnown RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms