RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 DDTLA6NHG4 134 aaPredicted RBP13□□□□□ -0.33
SNRNP200-208ENST00000497539 FOXN1O15353 648 aa13□□□□□ -0.33
SNRNP200-208ENST00000497539 MYL1P05976 194 aa13□□□□□ -0.33
SNRNP200-208ENST00000497539 PNMA6AP0CW24 399 aaPredicted RBP13□□□□□ -0.33
SNRNP200-208ENST00000497539 ATP2B1P20020 1258 aa13□□□□□ -0.33
SNRNP200-208ENST00000497539 CASQ1P31415 396 aa13□□□□□ -0.33
SNRNP200-208ENST00000497539 PLA2G4AP47712 749 aa13□□□□□ -0.33
SNRNP200-208ENST00000497539 FANCCQ00597 558 aa13□□□□□ -0.33
SNRNP200-208ENST00000497539 SF3B2Q13435 895 aaKnown RBP13□□□□□ -0.33
SNRNP200-208ENST00000497539 TMEM179Q6ZVK1 233 aa13□□□□□ -0.33
SNRNP200-208ENST00000497539 RASGRP2Q7LDG7 609 aa13□□□□□ -0.33
SNRNP200-208ENST00000497539 IQUBQ8NA54 791 aa13□□□□□ -0.33
SNRNP200-208ENST00000497539 ENOX1Q8TC92 643 aaKnown RBP13□□□□□ -0.33
SNRNP200-208ENST00000497539 MAGEF1Q9HAY2 307 aa13□□□□□ -0.33
SNRNP200-208ENST00000497539 VWA3AA6NCI4 1184 aa13□□□□□ -0.33
SNRNP200-208ENST00000497539 MCM7P33993 719 aa13□□□□□ -0.33
SNRNP200-208ENST00000497539 CFAP100Q494V2 611 aa13□□□□□ -0.33
SNRNP200-208ENST00000497539 LRCH2Q5VUJ6 765 aa13□□□□□ -0.33
SNRNP200-208ENST00000497539 TSHZ1Q6ZSZ6 1077 aa13□□□□□ -0.33
SNRNP200-208ENST00000497539 LRRC47Q8N1G4 583 aaKnown RBP13□□□□□ -0.33
SNRNP200-208ENST00000497539 GLT8D2Q9H1C3 349 aa13□□□□□ -0.33
SNRNP200-208ENST00000497539 JMJD4Q9H9V9 463 aa13□□□□□ -0.33
SNRNP200-208ENST00000497539 ZCCHC17Q9NP64 241 aaKnown RBP13□□□□□ -0.33
SNRNP200-208ENST00000497539 KIF2AO00139 706 aaPredicted RBP12.99□□□□□ -0.33
SNRNP200-208ENST00000497539 C21orf2O43822 256 aa12.99□□□□□ -0.33
SNRNP200-208ENST00000497539 CLK2P49760 499 aaKnown RBP12.99□□□□□ -0.33
SNRNP200-208ENST00000497539 HNRNPH2P55795 449 aaKnown RBP12.99□□□□□ -0.33
SNRNP200-208ENST00000497539 TGFB2P61812 414 aa12.99□□□□□ -0.33
SNRNP200-208ENST00000497539 CCDC150Q8NCX0 1101 aa12.99□□□□□ -0.33
SNRNP200-208ENST00000497539 UBXN4Q92575 508 aa12.99□□□□□ -0.33
SNRNP200-208ENST00000497539 GMCL1Q96IK5 515 aa12.99□□□□□ -0.33
SNRNP200-208ENST00000497539 CARD6Q9BX69 1037 aa12.99□□□□□ -0.33
SNRNP200-208ENST00000497539 CUEDC2Q9H467 287 aa12.99□□□□□ -0.33
SNRNP200-208ENST00000497539 RIC8AQ9NPQ8 531 aa12.99□□□□□ -0.33
SNRNP200-208ENST00000497539 KCND1Q9NSA2 647 aa12.99□□□□□ -0.33
SNRNP200-208ENST00000497539 HERC5Q9UII4 1024 aaKnown RBP12.99□□□□□ -0.33
SNRNP200-208ENST00000497539 BAZ2BQ9UIF8 2168 aaKnown RBP12.99□□□□□ -0.33
SNRNP200-208ENST00000497539 GTPBP6O43824 516 aaPredicted RBP12.99□□□□□ -0.33
SNRNP200-208ENST00000497539 NEK8Q86SG6 692 aa12.99□□□□□ -0.33
SNRNP200-208ENST00000497539 CCDC125Q86Z20 511 aa12.99□□□□□ -0.33
SNRNP200-208ENST00000497539 PCDHAC2Q9Y5I4 1007 aa12.99□□□□□ -0.33
SNRNP200-208ENST00000497539 SPDYE2BA6NHP3 402 aa12.98□□□□□ -0.33
SNRNP200-208ENST00000497539 TMEM232C9JQI7 657 aa12.98□□□□□ -0.33
SNRNP200-208ENST00000497539 SPDYE6P0CI01 402 aa12.98□□□□□ -0.33
SNRNP200-208ENST00000497539 ZNF18P17022 549 aa12.98□□□□□ -0.33
SNRNP200-208ENST00000497539 TXLNAP40222 546 aa12.98□□□□□ -0.33
SNRNP200-208ENST00000497539 ADCY7P51828 1080 aa12.98□□□□□ -0.33
SNRNP200-208ENST00000497539 ETF1P62495 437 aaKnown RBP12.98□□□□□ -0.33
SNRNP200-208ENST00000497539 CERKLQ49MI3 558 aaPredicted RBP12.98□□□□□ -0.33
SNRNP200-208ENST00000497539 DTHD1Q6ZMT9 781 aa12.98□□□□□ -0.33
SNRNP200-208ENST00000497539 ADGRF4Q8IZF3 695 aa12.98□□□□□ -0.33
SNRNP200-208ENST00000497539 REXO1Q8N1G1 1221 aaKnown RBP12.98□□□□□ -0.33
SNRNP200-208ENST00000497539 AGBL3Q8NEM8 1001 aa12.98□□□□□ -0.33
SNRNP200-208ENST00000497539 RASGRP4Q8TDF6 673 aa12.98□□□□□ -0.33
SNRNP200-208ENST00000497539 DHX58Q96C10 678 aa12.98□□□□□ -0.33
SNRNP200-208ENST00000497539 ZBED3Q96IU2 234 aaPredicted RBP12.98□□□□□ -0.33
SNRNP200-208ENST00000497539 PSDA5PKW4 1024 aaPredicted RBP12.98□□□□□ -0.33
SNRNP200-208ENST00000497539 ZBTB5O15062 677 aa12.98□□□□□ -0.33
SNRNP200-208ENST00000497539 CBFA2T2O43439 604 aa12.98□□□□□ -0.33
SNRNP200-208ENST00000497539 SERPINC1P01008 464 aa12.98□□□□□ -0.33
SNRNP200-208ENST00000497539 DPEP1P16444 411 aa12.98□□□□□ -0.33
SNRNP200-208ENST00000497539 INF2Q27J81 1249 aa12.98□□□□□ -0.33
SNRNP200-208ENST00000497539 SIAH1Q8IUQ4 282 aa12.98□□□□□ -0.33
SNRNP200-208ENST00000497539 FRMPD2Q68DX3 1309 aaPredicted RBP12.98□□□□□ -0.33
SNRNP200-208ENST00000497539 OR52Z1P0C646 297 aa12.97□□□□□ -0.33
SNRNP200-208ENST00000497539 UBASH3AP57075 661 aa12.97□□□□□ -0.33
SNRNP200-208ENST00000497539 MCTP2Q6DN12 878 aa12.97□□□□□ -0.33
SNRNP200-208ENST00000497539 TRIM65Q6PJ69 517 aa12.97□□□□□ -0.33
SNRNP200-208ENST00000497539 MPHOSPH10O00566 681 aaKnown RBP12.97□□□□□ -0.33
SNRNP200-208ENST00000497539 TBC1D12O60347 775 aa12.97□□□□□ -0.33
SNRNP200-208ENST00000497539 SPDYE2Q495Y8 402 aa12.97□□□□□ -0.33
SNRNP200-208ENST00000497539 BTNL9Q6UXG8 535 aa12.97□□□□□ -0.33
SNRNP200-208ENST00000497539 CCDC91Q7Z6B0 441 aa12.97□□□□□ -0.33
SNRNP200-208ENST00000497539 NEK11Q8NG66 645 aa12.97□□□□□ -0.33
SNRNP200-208ENST00000497539 NAP1L4Q99733 375 aaKnown RBP12.97□□□□□ -0.33
SNRNP200-208ENST00000497539 UBA5Q9GZZ9 404 aa12.97□□□□□ -0.33
SNRNP200-208ENST00000497539 TMEM60Q9H2L4 133 aa12.97□□□□□ -0.33
SNRNP200-208ENST00000497539 CPVLQ9H3G5 476 aa12.97□□□□□ -0.33
SNRNP200-208ENST00000497539 DISC1Q9NRI5 854 aa12.97□□□□□ -0.33
SNRNP200-208ENST00000497539 HDAC9Q9UKV0 1011 aa12.97□□□□□ -0.33
SNRNP200-208ENST00000497539 CNTNAP1P78357 1384 aa12.97□□□□□ -0.33
SNRNP200-208ENST00000497539 SLC26A4O43511 780 aa12.96□□□□□ -0.33
SNRNP200-208ENST00000497539 PPP1R11O60927 126 aaPredicted RBP12.96□□□□□ -0.33
SNRNP200-208ENST00000497539 EEF2P13639 858 aaKnown RBP12.96□□□□□ -0.33
SNRNP200-208ENST00000497539 CUL4BQ13620 913 aa12.96□□□□□ -0.33
SNRNP200-208ENST00000497539 MUM1L1Q5H9M0 696 aa12.96□□□□□ -0.33
SNRNP200-208ENST00000497539 TMCO3Q6UWJ1 677 aa12.96□□□□□ -0.33
SNRNP200-208ENST00000497539 FAM151AQ8WW52 585 aa12.96□□□□□ -0.33
SNRNP200-208ENST00000497539 PRMT6Q96LA8 375 aaPredicted RBP12.96□□□□□ -0.33
SNRNP200-208ENST00000497539 PDGFDQ9GZP0 370 aaPredicted RBP12.96□□□□□ -0.33
SNRNP200-208ENST00000497539 ATF5Q9Y2D1 282 aaPredicted RBP12.96□□□□□ -0.33
SNRNP200-208ENST00000497539 JRKLQ9Y4A0 524 aa12.96□□□□□ -0.33
SNRNP200-208ENST00000497539 CYP2C19P33261 490 aa12.96□□□□□ -0.33
SNRNP200-208ENST00000497539 KCNJ6P48051 423 aa12.96□□□□□ -0.33
SNRNP200-208ENST00000497539 FXR2P51116 673 aaKnown RBP eCLIP12.96□□□□□ -0.333e-8■■■□□ 17.6
SNRNP200-208ENST00000497539 RBM5P52756 815 aaKnown RBP eCLIP12.96□□□□□ -0.33
SNRNP200-208ENST00000497539 ABCB5Q2M3G0 1257 aa12.96□□□□□ -0.33
SNRNP200-208ENST00000497539 PPP4R3AQ6IN85 833 aa12.96□□□□□ -0.33
SNRNP200-208ENST00000497539 CLEC10AQ8IUN9 316 aa12.96□□□□□ -0.33
SNRNP200-208ENST00000497539 MTMR9Q96QG7 549 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms