RNA–Protein interactions for RNA: ENST00000497026.5

CSMD3-208, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 1,406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-208ENST00000497026 TAF1CQ15572 869 aaPredicted RBP6.46□□□□□ -1.38
CSMD3-208ENST00000497026 SULT6B1Q6IMI4 303 aa6.46□□□□□ -1.38
CSMD3-208ENST00000497026 LRRN4CLQ8ND94 238 aa6.46□□□□□ -1.38
CSMD3-208ENST00000497026 SYTL4Q96C24 671 aaPredicted RBP6.46□□□□□ -1.38
CSMD3-208ENST00000497026 DIAPH1O60610 1272 aaKnown RBP6.45□□□□□ -1.38
CSMD3-208ENST00000497026 CBX7O95931 251 aa6.45□□□□□ -1.38
CSMD3-208ENST00000497026 PGRP06401 933 aa6.45□□□□□ -1.38
CSMD3-208ENST00000497026 PPP2R1AP30153 589 aa6.45□□□□□ -1.38
CSMD3-208ENST00000497026 DEKP35659 375 aaKnown RBP6.45□□□□□ -1.38
CSMD3-208ENST00000497026 ANGEL2Q5VTE6 544 aaKnown RBP6.45□□□□□ -1.38
CSMD3-208ENST00000497026 LETMD1Q6P1Q0 360 aa6.45□□□□□ -1.38
CSMD3-208ENST00000497026 TMC4Q7Z404 712 aa6.45□□□□□ -1.38
CSMD3-208ENST00000497026 CDH24Q86UP0 819 aa6.45□□□□□ -1.38
CSMD3-208ENST00000497026 IFNL2Q8IZJ0 200 aa6.45□□□□□ -1.38
CSMD3-208ENST00000497026 POU5F2Q8N7G0 328 aa6.45□□□□□ -1.38
CSMD3-208ENST00000497026 ASIC4Q96FT7 647 aa6.45□□□□□ -1.38
CSMD3-208ENST00000497026 HSPA12BQ96MM6 686 aa6.45□□□□□ -1.38
CSMD3-208ENST00000497026 PDGFDQ9GZP0 370 aaPredicted RBP6.45□□□□□ -1.38
CSMD3-208ENST00000497026 VTI1BQ9UEU0 232 aa6.45□□□□□ -1.38
CSMD3-208ENST00000497026 SNX11Q9Y5W9 270 aa6.45□□□□□ -1.38
CSMD3-208ENST00000497026 ZNF831Q5JPB2 1677 aa6.44□□□□□ -1.38
CSMD3-208ENST00000497026 MRC1P22897 1456 aa6.44□□□□□ -1.38
CSMD3-208ENST00000497026 FAM155AB1AL88 458 aaPredicted RBP6.44□□□□□ -1.38
CSMD3-208ENST00000497026 HMOX1P09601 288 aa6.44□□□□□ -1.38
CSMD3-208ENST00000497026 ZP2Q05996 745 aa6.44□□□□□ -1.38
CSMD3-208ENST00000497026 ZNF827Q17R98 1081 aa6.44□□□□□ -1.38
CSMD3-208ENST00000497026 SFRP5Q5T4F7 317 aa6.44□□□□□ -1.38
CSMD3-208ENST00000497026 OGFOD2Q6N063 350 aa6.44□□□□□ -1.38
CSMD3-208ENST00000497026 BNC2Q6ZN30 1099 aaPredicted RBP6.44□□□□□ -1.38
CSMD3-208ENST00000497026 PHC3Q8NDX5 983 aa6.44□□□□□ -1.38
CSMD3-208ENST00000497026 TJP2Q9UDY2 1190 aa6.44□□□□□ -1.38
CSMD3-208ENST00000497026 COL5A3P25940 1745 aaPredicted RBP6.44□□□□□ -1.38
CSMD3-208ENST00000497026 COL24A1Q17RW2 1714 aa6.44□□□□□ -1.38
CSMD3-208ENST00000497026 PALLDQ8WX93 1383 aa6.44□□□□□ -1.38
CSMD3-208ENST00000497026 CICQ96RK0 1608 aaPredicted RBP6.44□□□□□ -1.38
CSMD3-208ENST00000497026 UBR3Q6ZT12 1888 aa6.44□□□□□ -1.38
CSMD3-208ENST00000497026 C4BP0C0L5 1744 aa6.43□□□□□ -1.38
CSMD3-208ENST00000497026 SIPA1L3O60292 1781 aaPredicted RBP6.43□□□□□ -1.38
CSMD3-208ENST00000497026 H3BS24 57 aa6.43□□□□□ -1.38
CSMD3-208ENST00000497026 CST3P01034 146 aaPredicted RBP6.43□□□□□ -1.38
CSMD3-208ENST00000497026 C8AP07357 584 aa6.43□□□□□ -1.38
CSMD3-208ENST00000497026 JUNBP17275 347 aaPredicted RBP6.43□□□□□ -1.38
CSMD3-208ENST00000497026 DDX10Q13206 875 aaKnown RBP6.43□□□□□ -1.38
CSMD3-208ENST00000497026 SLC15A2Q16348 729 aa6.43□□□□□ -1.38
CSMD3-208ENST00000497026 CCDC27Q2M243 656 aa6.43□□□□□ -1.38
CSMD3-208ENST00000497026 AMOTQ4VCS5 1084 aa6.43□□□□□ -1.38
CSMD3-208ENST00000497026 PLEKHO1Q53GL0 409 aaPredicted RBP6.43□□□□□ -1.38
CSMD3-208ENST00000497026 ZNF530Q6P9A1 599 aaPredicted RBP6.43□□□□□ -1.38
CSMD3-208ENST00000497026 ASB11Q8WXH4 323 aa6.43□□□□□ -1.38
CSMD3-208ENST00000497026 PIGBQ92521 554 aa6.43□□□□□ -1.38
CSMD3-208ENST00000497026 ATP13A1Q9HD20 1204 aa6.43□□□□□ -1.38
CSMD3-208ENST00000497026 MAPK8IP1Q9UQF2 711 aa6.43□□□□□ -1.38
CSMD3-208ENST00000497026 CORINQ9Y5Q5 1042 aa6.43□□□□□ -1.38
CSMD3-208ENST00000497026 TJP1Q07157 1748 aa6.43□□□□□ -1.38
CSMD3-208ENST00000497026 SRCAPQ6ZRS2 3230 aa6.43□□□□□ -1.38
CSMD3-208ENST00000497026 UBR2Q8IWV8 1755 aa6.43□□□□□ -1.38
CSMD3-208ENST00000497026 SORBS3O60504 671 aa6.42□□□□□ -1.38
CSMD3-208ENST00000497026 TSNAXIP1Q2TAA8 658 aa6.42□□□□□ -1.38
CSMD3-208ENST00000497026 MFSD4AQ8N468 514 aa6.42□□□□□ -1.38
CSMD3-208ENST00000497026 MFSD2AQ8NA29 543 aa6.42□□□□□ -1.38
CSMD3-208ENST00000497026 TMEM87BQ96K49 555 aa6.42□□□□□ -1.38
CSMD3-208ENST00000497026 MRS2Q9HD23 443 aa6.42□□□□□ -1.38
CSMD3-208ENST00000497026 PITPNM2Q9BZ72 1349 aa6.42□□□□□ -1.38
CSMD3-208ENST00000497026 DLG5Q8TDM6 1919 aa6.42□□□□□ -1.38
CSMD3-208ENST00000497026 UPK3BL1B0FP48 263 aa6.42□□□□□ -1.38
CSMD3-208ENST00000497026 UPK3BL2E5RIL1 263 aa6.42□□□□□ -1.38
CSMD3-208ENST00000497026 U2SURPO15042 1029 aaKnown RBP6.42□□□□□ -1.38
CSMD3-208ENST00000497026 EIF5BO60841 1220 aaKnown RBP6.42□□□□□ -1.38
CSMD3-208ENST00000497026 PF4P02776 101 aa6.42□□□□□ -1.38
CSMD3-208ENST00000497026 CAP2P40123 477 aa6.42□□□□□ -1.38
CSMD3-208ENST00000497026 ST13P50502 369 aaKnown RBP6.42□□□□□ -1.38
CSMD3-208ENST00000497026 FAM160A1Q05DH4 1040 aa6.42□□□□□ -1.38
CSMD3-208ENST00000497026 MTHFSDQ2M296 383 aaKnown RBP6.42□□□□□ -1.38
CSMD3-208ENST00000497026 ACSF2Q96CM8 615 aaPredicted RBP6.42□□□□□ -1.38
CSMD3-208ENST00000497026 NOC4LQ9BVI4 516 aaKnown RBP6.42□□□□□ -1.38
CSMD3-208ENST00000497026 CARS2Q9HA77 564 aaKnown RBP6.42□□□□□ -1.38
CSMD3-208ENST00000497026 CCNL1Q9UK58 526 aaPredicted RBP6.42□□□□□ -1.38
CSMD3-208ENST00000497026 ASAP1Q9ULH1 1129 aa6.42□□□□□ -1.38
CSMD3-208ENST00000497026 CAPN6Q9Y6Q1 641 aa6.42□□□□□ -1.38
CSMD3-208ENST00000497026 PNPLA7Q6ZV29 1317 aa6.41□□□□□ -1.38
CSMD3-208ENST00000497026 MINDY4BA8MYZ0 360 aa6.41□□□□□ -1.38
CSMD3-208ENST00000497026 BIN1O00499 593 aa6.41□□□□□ -1.38
CSMD3-208ENST00000497026 F13A1P00488 732 aa6.41□□□□□ -1.38
CSMD3-208ENST00000497026 HSP90AB1P08238 724 aaKnown RBP6.41□□□□□ -1.38
CSMD3-208ENST00000497026 GBP2P32456 591 aaPredicted RBP6.41□□□□□ -1.38
CSMD3-208ENST00000497026 CLCN7P51798 805 aa6.41□□□□□ -1.38
CSMD3-208ENST00000497026 RPL6Q02878 288 aaKnown RBP6.41□□□□□ -1.38
CSMD3-208ENST00000497026 C1orf141Q5JVX7 400 aa6.41□□□□□ -1.38
CSMD3-208ENST00000497026 SLC23A3Q6PIS1 610 aa6.41□□□□□ -1.38
CSMD3-208ENST00000497026 AMIGO3Q86WK7 504 aa6.41□□□□□ -1.38
CSMD3-208ENST00000497026 CRELD1Q96HD1 420 aa6.41□□□□□ -1.38
CSMD3-208ENST00000497026 SEMA3GQ9NS98 782 aa6.41□□□□□ -1.38
CSMD3-208ENST00000497026 STK32BQ9NY57 414 aa6.41□□□□□ -1.38
CSMD3-208ENST00000497026 TMOD3Q9NYL9 352 aa6.41□□□□□ -1.38
CSMD3-208ENST00000497026 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.41□□□□□ -1.38
CSMD3-208ENST00000497026 MYH14Q7Z406 1995 aaKnown RBP6.41□□□□□ -1.38
CSMD3-208ENST00000497026 KCPQ6ZWJ8 1503 aa6.4□□□□□ -1.38
CSMD3-208ENST00000497026 ERVV-2B6SEH9 535 aa6.4□□□□□ -1.39
CSMD3-208ENST00000497026 RLBP1P12271 317 aa6.4□□□□□ -1.39
CSMD3-208ENST00000497026 PLCG1P19174 1290 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms