RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 SCRN1Q12765 414 aa8.62□□□□□ -1.03
MDM2-220ENST00000496959 PLEKHN1Q494U1 663 aaPredicted RBP8.62□□□□□ -1.03
MDM2-220ENST00000496959 FBLN7Q53RD9 439 aa8.62□□□□□ -1.03
MDM2-220ENST00000496959 CABP7Q86V35 215 aa8.62□□□□□ -1.03
MDM2-220ENST00000496959 AMIGO3Q86WK7 504 aa8.62□□□□□ -1.03
MDM2-220ENST00000496959 LDHDQ86WU2 507 aa8.62□□□□□ -1.03
MDM2-220ENST00000496959 MCF2L2Q86YR7 1114 aa8.62□□□□□ -1.03
MDM2-220ENST00000496959 MZB1Q8WU39 189 aa8.62□□□□□ -1.03
MDM2-220ENST00000496959 LRP2BPQ9P2M1 347 aa8.62□□□□□ -1.03
MDM2-220ENST00000496959 CDR1P51861 262 aa8.61□□□□□ -1.03
MDM2-220ENST00000496959 EPHB3P54753 998 aa8.61□□□□□ -1.03
MDM2-220ENST00000496959 SV2CQ496J9 727 aa8.61□□□□□ -1.03
MDM2-220ENST00000496959 GTF2IRD2BQ6EKJ0 949 aa8.61□□□□□ -1.03
MDM2-220ENST00000496959 LCNL1Q6ZST4 164 aa8.61□□□□□ -1.03
MDM2-220ENST00000496959 GTF2IRD2Q86UP8 949 aa8.61□□□□□ -1.03
MDM2-220ENST00000496959 CPNE8Q86YQ8 564 aa8.61□□□□□ -1.03
MDM2-220ENST00000496959 LZTR1Q8N653 840 aa8.61□□□□□ -1.03
MDM2-220ENST00000496959 COPS5Q92905 334 aa8.61□□□□□ -1.03
MDM2-220ENST00000496959 CYP26B1Q9NR63 512 aa8.61□□□□□ -1.03
MDM2-220ENST00000496959 DBR1Q9UK59 544 aaKnown RBP8.61□□□□□ -1.03
MDM2-220ENST00000496959 B2RBV5 119 aa8.6□□□□□ -1.03
MDM2-220ENST00000496959 F8W031 263 aaPredicted RBP8.6□□□□□ -1.03
MDM2-220ENST00000496959 NPHS1O60500 1241 aa8.6□□□□□ -1.03
MDM2-220ENST00000496959 SSPNQ14714 243 aa8.6□□□□□ -1.03
MDM2-220ENST00000496959 TMEM151BQ8IW70 566 aa8.6□□□□□ -1.03
MDM2-220ENST00000496959 MRGPRX3Q96LB0 322 aa8.6□□□□□ -1.03
MDM2-220ENST00000496959 GMLQ99445 158 aa8.6□□□□□ -1.03
MDM2-220ENST00000496959 SUSD5O60279 629 aa8.59□□□□□ -1.03
MDM2-220ENST00000496959 PI3P19957 117 aa8.59□□□□□ -1.03
MDM2-220ENST00000496959 MMP19Q99542 508 aa8.59□□□□□ -1.03
MDM2-220ENST00000496959 NKX2-4Q9H2Z4 354 aa8.59□□□□□ -1.03
MDM2-220ENST00000496959 GPRC5CQ9NQ84 441 aa8.59□□□□□ -1.03
MDM2-220ENST00000496959 IGSF5Q9NSI5 407 aa8.59□□□□□ -1.03
MDM2-220ENST00000496959 CLEC1BQ9P126 229 aa8.59□□□□□ -1.03
MDM2-220ENST00000496959 RWDD3Q9Y3V2 267 aa8.59□□□□□ -1.03
MDM2-220ENST00000496959 PLS3P13797 630 aa8.58□□□□□ -1.04
MDM2-220ENST00000496959 TCERG1LQ5VWI1 586 aa8.58□□□□□ -1.04
MDM2-220ENST00000496959 USP33Q8TEY7 942 aa8.58□□□□□ -1.04
MDM2-220ENST00000496959 GULP1Q9UBP9 304 aa8.58□□□□□ -1.04
MDM2-220ENST00000496959 PCDHA5Q9Y5H7 936 aa8.58□□□□□ -1.04
MDM2-220ENST00000496959 ARID1BQ8NFD5 2236 aaPredicted RBP8.57□□□□□ -1.04
MDM2-220ENST00000496959 ZC3H12DA2A288 527 aaKnown RBP8.57□□□□□ -1.04
MDM2-220ENST00000496959 C7orf72A4D263 438 aa8.57□□□□□ -1.04
MDM2-220ENST00000496959 IRS4O14654 1257 aaPredicted RBP8.57□□□□□ -1.04
MDM2-220ENST00000496959 THBDP07204 575 aa8.57□□□□□ -1.04
MDM2-220ENST00000496959 GLI4P10075 376 aa8.57□□□□□ -1.04
MDM2-220ENST00000496959 PFKLP17858 780 aa8.57□□□□□ -1.04
MDM2-220ENST00000496959 ZNF200P98182 395 aaPredicted RBP8.57□□□□□ -1.04
MDM2-220ENST00000496959 IQCEQ6IPM2 695 aa8.57□□□□□ -1.04
MDM2-220ENST00000496959 EEPD1Q7L9B9 569 aa8.57□□□□□ -1.04
MDM2-220ENST00000496959 IGDCC3Q8IVU1 814 aa8.57□□□□□ -1.04
MDM2-220ENST00000496959 MICAL1Q8TDZ2 1067 aa8.57□□□□□ -1.04
MDM2-220ENST00000496959 LGR4Q9BXB1 951 aa8.57□□□□□ -1.04
MDM2-220ENST00000496959 NUDT5Q9UKK9 219 aa8.57□□□□□ -1.04
MDM2-220ENST00000496959 BUB1BO60566 1050 aaPredicted RBP8.56□□□□□ -1.04
MDM2-220ENST00000496959 GJB6O95452 261 aa8.56□□□□□ -1.04
MDM2-220ENST00000496959 ITGAVP06756 1048 aa8.56□□□□□ -1.04
MDM2-220ENST00000496959 HOXC12P31275 282 aa8.56□□□□□ -1.04
MDM2-220ENST00000496959 NCKAP1LP55160 1127 aa8.56□□□□□ -1.04
MDM2-220ENST00000496959 TARBP2Q15633 366 aaKnown RBP8.56□□□□□ -1.04
MDM2-220ENST00000496959 ANKS3Q6ZW76 656 aa8.56□□□□□ -1.04
MDM2-220ENST00000496959 ZNF227Q86WZ6 799 aa8.56□□□□□ -1.04
MDM2-220ENST00000496959 NETO2Q8NC67 525 aa8.56□□□□□ -1.04
MDM2-220ENST00000496959 BTN2A2Q8WVV5 523 aa8.56□□□□□ -1.04
MDM2-220ENST00000496959 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.56□□□□□ -1.04
MDM2-220ENST00000496959 IRS2Q9Y4H2 1338 aa8.55□□□□□ -1.04
MDM2-220ENST00000496959 AGRPO00253 132 aa8.55□□□□□ -1.04
MDM2-220ENST00000496959 PRR5P85299 388 aa8.55□□□□□ -1.04
MDM2-220ENST00000496959 MRM1Q6IN84 353 aaKnown RBP8.55□□□□□ -1.04
MDM2-220ENST00000496959 CNKSR3Q6P9H4 555 aa8.55□□□□□ -1.04
MDM2-220ENST00000496959 PANK1Q8TE04 598 aa8.55□□□□□ -1.04
MDM2-220ENST00000496959 HNRNPLLQ8WVV9 542 aaKnown RBP8.55□□□□□ -1.04
MDM2-220ENST00000496959 CCDC140Q96MF4 163 aa8.55□□□□□ -1.04
MDM2-220ENST00000496959 MTA3Q9BTC8 594 aa8.55□□□□□ -1.04
MDM2-220ENST00000496959 EPN3Q9H201 632 aa8.55□□□□□ -1.04
MDM2-220ENST00000496959 HCFC2Q9Y5Z7 792 aa8.55□□□□□ -1.04
MDM2-220ENST00000496959 PPP1R11O60927 126 aaPredicted RBP8.54□□□□□ -1.04
MDM2-220ENST00000496959 FUCA1P04066 466 aa8.54□□□□□ -1.04
MDM2-220ENST00000496959 SNRPB2P08579 225 aaKnown RBP8.54□□□□□ -1.04
MDM2-220ENST00000496959 AFF3P51826 1226 aaKnown RBP8.54□□□□□ -1.04
MDM2-220ENST00000496959 FAM129CQ86XR2 697 aa8.54□□□□□ -1.04
MDM2-220ENST00000496959 TMEFF1Q8IYR6 380 aa8.54□□□□□ -1.04
MDM2-220ENST00000496959 FRS2Q8WU20 508 aa8.54□□□□□ -1.04
MDM2-220ENST00000496959 PEX11GQ96HA9 241 aa8.54□□□□□ -1.04
MDM2-220ENST00000496959 TBX1O43435 398 aa8.53□□□□□ -1.04
MDM2-220ENST00000496959 CPP00450 1065 aa8.53□□□□□ -1.04
MDM2-220ENST00000496959 ZC3H6P61129 1189 aaKnown RBP8.53□□□□□ -1.04
MDM2-220ENST00000496959 E4F1Q66K89 784 aaPredicted RBP8.53□□□□□ -1.04
MDM2-220ENST00000496959 NLGN1Q8N2Q7 840 aa8.53□□□□□ -1.04
MDM2-220ENST00000496959 NPLOC4Q8TAT6 608 aa8.53□□□□□ -1.04
MDM2-220ENST00000496959 ALG3Q92685 438 aa8.53□□□□□ -1.04
MDM2-220ENST00000496959 DACT3Q96B18 629 aaPredicted RBP8.53□□□□□ -1.04
MDM2-220ENST00000496959 RXFP1Q9HBX9 757 aa8.53□□□□□ -1.04
MDM2-220ENST00000496959 ST7Q9NRC1 585 aa8.53□□□□□ -1.04
MDM2-220ENST00000496959 ECI1P42126 302 aa8.52□□□□□ -1.05
MDM2-220ENST00000496959 KCNJ6P48051 423 aa8.52□□□□□ -1.05
MDM2-220ENST00000496959 SLC9A5Q14940 896 aa8.52□□□□□ -1.05
MDM2-220ENST00000496959 WWC2Q6AWC2 1192 aa8.52□□□□□ -1.05
MDM2-220ENST00000496959 DIO2Q92813 273 aa8.52□□□□□ -1.05
MDM2-220ENST00000496959 TSPAN17Q96FV3 270 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms