RNA–Protein interactions for RNA: ENST00000496907.1

HMGCL-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 858 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-206ENST00000496907 CCDC84Q86UT8 332 aaPredicted RBP7.06□□□□□ -1.28
HMGCL-206ENST00000496907 TRMT44Q8IYL2 757 aaKnown RBP7.06□□□□□ -1.28
HMGCL-206ENST00000496907 ZNF654Q8IZM8 581 aa7.06□□□□□ -1.28
HMGCL-206ENST00000496907 SPICE1Q8N0Z3 855 aa7.06□□□□□ -1.28
HMGCL-206ENST00000496907 FAM177A1Q8N128 213 aaPredicted RBP7.06□□□□□ -1.28
HMGCL-206ENST00000496907 LRRC47Q8N1G4 583 aaKnown RBP7.06□□□□□ -1.28
HMGCL-206ENST00000496907 CHST13Q8NET6 341 aa7.06□□□□□ -1.28
HMGCL-206ENST00000496907 DIS3LQ8TF46 1054 aaKnown RBP7.06□□□□□ -1.28
HMGCL-206ENST00000496907 COA7Q96BR5 231 aa7.06□□□□□ -1.28
HMGCL-206ENST00000496907 ZNF775Q96BV0 537 aaPredicted RBP7.06□□□□□ -1.28
HMGCL-206ENST00000496907 UHRF1Q96T88 793 aaPredicted RBP7.06□□□□□ -1.28
HMGCL-206ENST00000496907 LY9Q9HBG7 655 aa7.06□□□□□ -1.28
HMGCL-206ENST00000496907 CWC22Q9HCG8 908 aaKnown RBP7.06□□□□□ -1.28
HMGCL-206ENST00000496907 RYDENQ9NUL5 291 aaKnown RBP7.06□□□□□ -1.28
HMGCL-206ENST00000496907 MAP3K20Q9NYL2 800 aaKnown RBP7.06□□□□□ -1.28
HMGCL-206ENST00000496907 ISY1Q9ULR0 285 aaKnown RBP7.06□□□□□ -1.28
HMGCL-206ENST00000496907 GABRQQ9UN88 632 aa7.06□□□□□ -1.28
HMGCL-206ENST00000496907 TACC3Q9Y6A5 838 aa7.06□□□□□ -1.28
HMGCL-206ENST00000496907 CACNA1BQ00975 2339 aa7.06□□□□□ -1.28
HMGCL-206ENST00000496907 NAV1Q8NEY1 1877 aa7.05□□□□□ -1.28
HMGCL-206ENST00000496907 DDX60LQ5H9U9 1706 aaKnown RBP7.05□□□□□ -1.28
HMGCL-206ENST00000496907 CHD8Q9HCK8 2581 aa7.05□□□□□ -1.28
HMGCL-206ENST00000496907 B4DLN1 442 aa7.05□□□□□ -1.28
HMGCL-206ENST00000496907 hCG_1984214I3L0E3 225 aa7.05□□□□□ -1.28
HMGCL-206ENST00000496907 TNPO2O14787 897 aaKnown RBP7.05□□□□□ -1.28
HMGCL-206ENST00000496907 CYP2C8P10632 490 aa7.05□□□□□ -1.28
HMGCL-206ENST00000496907 BCRP11274 1271 aa7.05□□□□□ -1.28
HMGCL-206ENST00000496907 STAT3P40763 770 aa7.05□□□□□ -1.28
HMGCL-206ENST00000496907 FLT3LGP49771 235 aa7.05□□□□□ -1.28
HMGCL-206ENST00000496907 MRPL12P52815 198 aaKnown RBP7.05□□□□□ -1.28
HMGCL-206ENST00000496907 ANTXR2P58335 489 aa7.05□□□□□ -1.28
HMGCL-206ENST00000496907 AKAP17AQ02040 695 aaKnown RBP7.05□□□□□ -1.28
HMGCL-206ENST00000496907 GRM4Q14833 912 aa7.05□□□□□ -1.28
HMGCL-206ENST00000496907 SYDE2Q5VT97 1194 aa7.05□□□□□ -1.28
HMGCL-206ENST00000496907 MCTP2Q6DN12 878 aa7.05□□□□□ -1.28
HMGCL-206ENST00000496907 CHST3Q7LGC8 479 aa7.05□□□□□ -1.28
HMGCL-206ENST00000496907 RIOX2Q8IUF8 465 aa7.05□□□□□ -1.28
HMGCL-206ENST00000496907 ABRAQ8N0Z2 381 aa7.05□□□□□ -1.28
HMGCL-206ENST00000496907 ZNF713Q8N859 430 aaPredicted RBP7.05□□□□□ -1.28
HMGCL-206ENST00000496907 NUP133Q8WUM0 1156 aa7.05□□□□□ -1.28
HMGCL-206ENST00000496907 PPM1EQ8WY54 764 aa7.05□□□□□ -1.28
HMGCL-206ENST00000496907 KIFC2Q96AC6 838 aa7.05□□□□□ -1.28
HMGCL-206ENST00000496907 RRP36Q96EU6 259 aaKnown RBP7.05□□□□□ -1.28
HMGCL-206ENST00000496907 MPHOSPH6Q99547 160 aaKnown RBP7.05□□□□□ -1.28
HMGCL-206ENST00000496907 TEX13BQ9BXU2 312 aa7.05□□□□□ -1.28
HMGCL-206ENST00000496907 GLT8D2Q9H1C3 349 aa7.05□□□□□ -1.28
HMGCL-206ENST00000496907 SLC38A10Q9HBR0 1119 aa7.05□□□□□ -1.28
HMGCL-206ENST00000496907 SH2B1Q9NRF2 756 aaPredicted RBP7.05□□□□□ -1.28
HMGCL-206ENST00000496907 RBPJLQ9UBG7 517 aa7.05□□□□□ -1.28
HMGCL-206ENST00000496907 IVNS1ABPQ9Y6Y0 642 aa7.05□□□□□ -1.28
HMGCL-206ENST00000496907 CDH23Q9H251 3354 aa7.05□□□□□ -1.28
HMGCL-206ENST00000496907 SPTBN4Q9H254 2564 aa7.04□□□□□ -1.28
HMGCL-206ENST00000496907 LOC102724159A0A0B4J2E5 919 aa7.04□□□□□ -1.28
HMGCL-206ENST00000496907 PNMA6FA0A0J9YX94 578 aa7.04□□□□□ -1.28
HMGCL-206ENST00000496907 KLF18A0A0U1RQI7 1052 aa7.04□□□□□ -1.28
HMGCL-206ENST00000496907 FAM86C2PA6NEL3 165 aa7.04□□□□□ -1.28
HMGCL-206ENST00000496907 SPDYE16A6NNV3 312 aaPredicted RBP7.04□□□□□ -1.28
HMGCL-206ENST00000496907 CPLX1O14810 134 aa7.04□□□□□ -1.28
HMGCL-206ENST00000496907 PDIA4P13667 645 aaKnown RBP7.04□□□□□ -1.28
HMGCL-206ENST00000496907 METAP2P50579 478 aaKnown RBP eCLIP7.04□□□□□ -1.28
HMGCL-206ENST00000496907 ERVK-9P63128 1117 aa7.04□□□□□ -1.28
HMGCL-206ENST00000496907 ERVK-24P63145 666 aa7.04□□□□□ -1.28
HMGCL-206ENST00000496907 PWP2Q15269 919 aaKnown RBP7.04□□□□□ -1.28
HMGCL-206ENST00000496907 RTN1Q16799 776 aa7.04□□□□□ -1.28
HMGCL-206ENST00000496907 SHROOM1Q2M3G4 852 aaPredicted RBP7.04□□□□□ -1.28
HMGCL-206ENST00000496907 APOA5Q6Q788 366 aa7.04□□□□□ -1.28
HMGCL-206ENST00000496907 KCTD1Q719H9 257 aa7.04□□□□□ -1.28
HMGCL-206ENST00000496907 MCF2L2Q86YR7 1114 aa7.04□□□□□ -1.28
HMGCL-206ENST00000496907 TRIM22Q8IYM9 498 aa7.04□□□□□ -1.28
HMGCL-206ENST00000496907 RGS22Q8NE09 1264 aa7.04□□□□□ -1.28
HMGCL-206ENST00000496907 PXYLP1Q8TE99 480 aa7.04□□□□□ -1.28
HMGCL-206ENST00000496907 CCDC12Q8WUD4 166 aaPredicted RBP7.04□□□□□ -1.28
HMGCL-206ENST00000496907 SOCS4Q8WXH5 440 aa7.04□□□□□ -1.28
HMGCL-206ENST00000496907 WASF1Q92558 559 aa7.04□□□□□ -1.28
HMGCL-206ENST00000496907 BRF1Q92994 677 aa7.04□□□□□ -1.28
HMGCL-206ENST00000496907 COL26A1Q96A83 441 aa7.04□□□□□ -1.28
HMGCL-206ENST00000496907 TBC1D32Q96NH3 1257 aa7.04□□□□□ -1.28
HMGCL-206ENST00000496907 SPZ1Q9BXG8 430 aa7.04□□□□□ -1.28
HMGCL-206ENST00000496907 SPATC1LQ9H0A9 340 aa7.04□□□□□ -1.28
HMGCL-206ENST00000496907 CRISPLD2Q9H0B8 497 aa7.04□□□□□ -1.28
HMGCL-206ENST00000496907 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.04□□□□□ -1.28
HMGCL-206ENST00000496907 SLKQ9H2G2 1235 aaPredicted RBP7.04□□□□□ -1.28
HMGCL-206ENST00000496907 EPHX3Q9H6B9 360 aa7.04□□□□□ -1.28
HMGCL-206ENST00000496907 RIOX1Q9H6W3 641 aa7.04□□□□□ -1.28
HMGCL-206ENST00000496907 GPCPD1Q9NPB8 672 aa7.04□□□□□ -1.28
HMGCL-206ENST00000496907 PAK6Q9NQU5 681 aaPredicted RBP7.04□□□□□ -1.28
HMGCL-206ENST00000496907 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.04□□□□□ -1.28
HMGCL-206ENST00000496907 SEC63Q9UGP8 760 aaKnown RBP7.04□□□□□ -1.28
HMGCL-206ENST00000496907 MAD2L2Q9UI95 211 aa7.04□□□□□ -1.28
HMGCL-206ENST00000496907 PRR12Q9ULL5 1215 aa7.04□□□□□ -1.28
HMGCL-206ENST00000496907 LIMCH1Q9UPQ0 1083 aa7.04□□□□□ -1.28
HMGCL-206ENST00000496907 MRPL11Q9Y3B7 192 aaKnown RBP7.04□□□□□ -1.28
HMGCL-206ENST00000496907 KIF3AQ9Y496 699 aa7.04□□□□□ -1.28
HMGCL-206ENST00000496907 SLC15A5A6NIM6 579 aa7.03□□□□□ -1.28
HMGCL-206ENST00000496907 GOLGA8AA7E2F4 631 aa7.03□□□□□ -1.28
HMGCL-206ENST00000496907 GOLGA8BA8MQT2 603 aa7.03□□□□□ -1.28
HMGCL-206ENST00000496907 ZBTB5O15062 677 aa7.03□□□□□ -1.28
HMGCL-206ENST00000496907 HRO43593 1189 aa7.03□□□□□ -1.28
HMGCL-206ENST00000496907 KRT37O76014 449 aa7.03□□□□□ -1.28
HMGCL-206ENST00000496907 ICAM1P05362 532 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms