RNA–Protein interactions for RNA: ENST00000496840.1

TARDBP-210, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-210ENST00000496840 A0A1W2PQJ5 194 aa9.6□□□□□ -0.87
TARDBP-210ENST00000496840 SCRN1Q12765 414 aa9.6□□□□□ -0.87
TARDBP-210ENST00000496840 PLEKHN1Q494U1 663 aaPredicted RBP9.6□□□□□ -0.87
TARDBP-210ENST00000496840 BICRALQ6AI39 1079 aa9.6□□□□□ -0.87
TARDBP-210ENST00000496840 CIAPIN1Q6FI81 312 aa9.6□□□□□ -0.87
TARDBP-210ENST00000496840 MRM1Q6IN84 353 aaKnown RBP9.6□□□□□ -0.87
TARDBP-210ENST00000496840 SPOCD1Q6ZMY3 1216 aa9.6□□□□□ -0.87
TARDBP-210ENST00000496840 TMC6Q7Z403 805 aa9.6□□□□□ -0.87
TARDBP-210ENST00000496840 AMIGO3Q86WK7 504 aa9.6□□□□□ -0.87
TARDBP-210ENST00000496840 MMP19Q99542 508 aa9.6□□□□□ -0.87
TARDBP-210ENST00000496840 ZC3H6P61129 1189 aaKnown RBP9.59□□□□□ -0.87
TARDBP-210ENST00000496840 ZC3H14Q6PJT7 736 aaKnown RBP9.59□□□□□ -0.87
TARDBP-210ENST00000496840 ZNF227Q86WZ6 799 aa9.59□□□□□ -0.87
TARDBP-210ENST00000496840 PPP1R14AQ96A00 147 aa9.59□□□□□ -0.87
TARDBP-210ENST00000496840 SIGLEC10Q96LC7 697 aa9.59□□□□□ -0.87
TARDBP-210ENST00000496840 EPN3Q9H201 632 aa9.59□□□□□ -0.87
TARDBP-210ENST00000496840 CNOT6Q9ULM6 557 aaKnown RBP9.59□□□□□ -0.87
TARDBP-210ENST00000496840 R3HCC1Q9Y3T6 440 aaKnown RBP9.59□□□□□ -0.87
TARDBP-210ENST00000496840 GJB6O95452 261 aa9.58□□□□□ -0.88
TARDBP-210ENST00000496840 CDR1P51861 262 aa9.58□□□□□ -0.88
TARDBP-210ENST00000496840 SV2CQ496J9 727 aa9.58□□□□□ -0.88
TARDBP-210ENST00000496840 EEPD1Q7L9B9 569 aa9.58□□□□□ -0.88
TARDBP-210ENST00000496840 CPNE8Q86YQ8 564 aa9.58□□□□□ -0.88
TARDBP-210ENST00000496840 MZB1Q8WU39 189 aa9.58□□□□□ -0.88
TARDBP-210ENST00000496840 IRS4O14654 1257 aaPredicted RBP9.57□□□□□ -0.88
TARDBP-210ENST00000496840 NUAK1O60285 661 aa9.57□□□□□ -0.88
TARDBP-210ENST00000496840 ITGAVP06756 1048 aa9.57□□□□□ -0.88
TARDBP-210ENST00000496840 GLI4P10075 376 aa9.57□□□□□ -0.88
TARDBP-210ENST00000496840 TACR1P25103 407 aa9.57□□□□□ -0.88
TARDBP-210ENST00000496840 EPHB3P54753 998 aa9.57□□□□□ -0.88
TARDBP-210ENST00000496840 LCNL1Q6ZST4 164 aa9.57□□□□□ -0.88
TARDBP-210ENST00000496840 ANKS3Q6ZW76 656 aa9.57□□□□□ -0.88
TARDBP-210ENST00000496840 LDHDQ86WU2 507 aa9.57□□□□□ -0.88
TARDBP-210ENST00000496840 LZTR1Q8N653 840 aa9.57□□□□□ -0.88
TARDBP-210ENST00000496840 HNRNPLLQ8WVV9 542 aaKnown RBP9.57□□□□□ -0.88
TARDBP-210ENST00000496840 MTA3Q9BTC8 594 aa9.57□□□□□ -0.88
TARDBP-210ENST00000496840 CLEC1BQ9P126 229 aa9.57□□□□□ -0.88
TARDBP-210ENST00000496840 KCTD3Q9Y597 815 aa9.57□□□□□ -0.88
TARDBP-210ENST00000496840 IRAK3Q9Y616 596 aa9.57□□□□□ -0.88
TARDBP-210ENST00000496840 IRS2Q9Y4H2 1338 aa9.56□□□□□ -0.88
TARDBP-210ENST00000496840 C7orf72A4D263 438 aa9.56□□□□□ -0.88
TARDBP-210ENST00000496840 RFXAPO00287 272 aa9.56□□□□□ -0.88
TARDBP-210ENST00000496840 KLF4O43474 513 aa9.56□□□□□ -0.88
TARDBP-210ENST00000496840 NPHS1O60500 1241 aa9.56□□□□□ -0.88
TARDBP-210ENST00000496840 THBDP07204 575 aa9.56□□□□□ -0.88
TARDBP-210ENST00000496840 ZSCAN22P10073 491 aaPredicted RBP9.56□□□□□ -0.88
TARDBP-210ENST00000496840 PLS3P13797 630 aa9.56□□□□□ -0.88
TARDBP-210ENST00000496840 HOXC12P31275 282 aa9.56□□□□□ -0.88
TARDBP-210ENST00000496840 CYP4F3Q08477 520 aa9.56□□□□□ -0.88
TARDBP-210ENST00000496840 ZNF385BQ569K4 471 aa9.56□□□□□ -0.88
TARDBP-210ENST00000496840 CABP7Q86V35 215 aa9.56□□□□□ -0.88
TARDBP-210ENST00000496840 NPLOC4Q8TAT6 608 aa9.56□□□□□ -0.88
TARDBP-210ENST00000496840 LGR4Q9BXB1 951 aa9.56□□□□□ -0.88
TARDBP-210ENST00000496840 GPRC5CQ9NQ84 441 aa9.56□□□□□ -0.88
TARDBP-210ENST00000496840 LRP2BPQ9P2M1 347 aa9.56□□□□□ -0.88
TARDBP-210ENST00000496840 PCDHA5Q9Y5H7 936 aa9.56□□□□□ -0.88
TARDBP-210ENST00000496840 SCG5P05408 212 aa9.55□□□□□ -0.88
TARDBP-210ENST00000496840 SSPNQ14714 243 aa9.55□□□□□ -0.88
TARDBP-210ENST00000496840 DDR2Q16832 855 aa9.55□□□□□ -0.88
TARDBP-210ENST00000496840 NETO2Q8NC67 525 aa9.55□□□□□ -0.88
TARDBP-210ENST00000496840 FRS2Q8WU20 508 aa9.55□□□□□ -0.88
TARDBP-210ENST00000496840 BTN2A2Q8WVV5 523 aa9.55□□□□□ -0.88
TARDBP-210ENST00000496840 CCDC140Q96MF4 163 aa9.55□□□□□ -0.88
TARDBP-210ENST00000496840 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.55□□□□□ -0.88
TARDBP-210ENST00000496840 RWDD3Q9Y3V2 267 aa9.55□□□□□ -0.88
TARDBP-210ENST00000496840 TBX1O43435 398 aa9.54□□□□□ -0.88
TARDBP-210ENST00000496840 PPP1R11O60927 126 aaPredicted RBP9.54□□□□□ -0.88
TARDBP-210ENST00000496840 SLC10A6Q3KNW5 377 aa9.54□□□□□ -0.88
TARDBP-210ENST00000496840 NAALADL2Q58DX5 795 aa9.54□□□□□ -0.88
TARDBP-210ENST00000496840 E4F1Q66K89 784 aaPredicted RBP9.54□□□□□ -0.88
TARDBP-210ENST00000496840 IQCEQ6IPM2 695 aa9.54□□□□□ -0.88
TARDBP-210ENST00000496840 IGDCC3Q8IVU1 814 aa9.54□□□□□ -0.88
TARDBP-210ENST00000496840 CELF2-AS1Q8N7Q2 184 aa9.54□□□□□ -0.88
TARDBP-210ENST00000496840 GULP1Q9UBP9 304 aa9.54□□□□□ -0.88
TARDBP-210ENST00000496840 F8W031 263 aaPredicted RBP9.53□□□□□ -0.88
TARDBP-210ENST00000496840 CAPNS1P04632 268 aa9.53□□□□□ -0.88
TARDBP-210ENST00000496840 TESK1Q15569 626 aa9.53□□□□□ -0.88
TARDBP-210ENST00000496840 FBLN7Q53RD9 439 aa9.53□□□□□ -0.88
TARDBP-210ENST00000496840 MBLAC2Q68D91 279 aa9.53□□□□□ -0.88
TARDBP-210ENST00000496840 TMEM151BQ8IW70 566 aa9.53□□□□□ -0.88
TARDBP-210ENST00000496840 IRF2BPLQ9H1B7 796 aa9.53□□□□□ -0.88
TARDBP-210ENST00000496840 FBLN5Q9UBX5 448 aa9.53□□□□□ -0.88
TARDBP-210ENST00000496840 CPP00450 1065 aa9.52□□□□□ -0.89
TARDBP-210ENST00000496840 PI3P19957 117 aa9.52□□□□□ -0.89
TARDBP-210ENST00000496840 FBLN1P23142 703 aa9.52□□□□□ -0.89
TARDBP-210ENST00000496840 ZNF200P98182 395 aaPredicted RBP9.52□□□□□ -0.89
TARDBP-210ENST00000496840 ACBD5Q5T8D3 534 aaPredicted RBP9.52□□□□□ -0.89
TARDBP-210ENST00000496840 TMEFF1Q8IYR6 380 aa9.52□□□□□ -0.89
TARDBP-210ENST00000496840 C8orf37Q96NL8 207 aa9.52□□□□□ -0.89
TARDBP-210ENST00000496840 ZC3H12DA2A288 527 aaKnown RBP9.51□□□□□ -0.89
TARDBP-210ENST00000496840 AGRPO00253 132 aa9.51□□□□□ -0.89
TARDBP-210ENST00000496840 SNRPB2P08579 225 aaKnown RBP9.51□□□□□ -0.89
TARDBP-210ENST00000496840 IGFBP6P24592 240 aaPredicted RBP9.51□□□□□ -0.89
TARDBP-210ENST00000496840 PRR5P85299 388 aa9.51□□□□□ -0.89
TARDBP-210ENST00000496840 RAB33AQ14088 237 aa9.51□□□□□ -0.89
TARDBP-210ENST00000496840 TSPAN17Q96FV3 270 aa9.51□□□□□ -0.89
TARDBP-210ENST00000496840 EPB41L4AQ9HCS5 686 aaPredicted RBP9.51□□□□□ -0.89
TARDBP-210ENST00000496840 ST7Q9NRC1 585 aa9.51□□□□□ -0.89
TARDBP-210ENST00000496840 DBR1Q9UK59 544 aaKnown RBP9.51□□□□□ -0.89
TARDBP-210ENST00000496840 NUDT5Q9UKK9 219 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms