RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 RNF38Q9H0F5 515 aa6.1□□□□□ -1.43
CD46-218ENST00000496723 PHAXQ9H814 394 aaKnown RBP6.1□□□□□ -1.43
CD46-218ENST00000496723 PCDHB10Q9UN67 800 aa6.1□□□□□ -1.43
CD46-218ENST00000496723 A0A1W2PQJ5 194 aa6.09□□□□□ -1.43
CD46-218ENST00000496723 SHOXO15266 292 aa6.09□□□□□ -1.43
CD46-218ENST00000496723 GSTM1P09488 218 aa6.09□□□□□ -1.43
CD46-218ENST00000496723 MSL3P1P0C860 447 aa6.09□□□□□ -1.43
CD46-218ENST00000496723 CASP7P55210 303 aa6.09□□□□□ -1.43
CD46-218ENST00000496723 GNPTABQ3T906 1256 aa6.09□□□□□ -1.43
CD46-218ENST00000496723 SLC43A3Q8NBI5 491 aa6.09□□□□□ -1.43
CD46-218ENST00000496723 NLGN2Q8NFZ4 835 aa6.09□□□□□ -1.43
CD46-218ENST00000496723 PDLIM7Q9NR12 457 aa6.09□□□□□ -1.43
CD46-218ENST00000496723 SMAD7O15105 426 aaKnown RBP6.08□□□□□ -1.44
CD46-218ENST00000496723 DBHP09172 617 aa6.08□□□□□ -1.44
CD46-218ENST00000496723 FGRP09769 529 aa6.08□□□□□ -1.44
CD46-218ENST00000496723 FBLN1P23142 703 aa6.08□□□□□ -1.44
CD46-218ENST00000496723 ZC3H6P61129 1189 aaKnown RBP6.08□□□□□ -1.44
CD46-218ENST00000496723 ZXDCQ2QGD7 858 aaPredicted RBP6.08□□□□□ -1.44
CD46-218ENST00000496723 MCF2L2Q86YR7 1114 aa6.08□□□□□ -1.44
CD46-218ENST00000496723 BDH2Q9BUT1 245 aa6.08□□□□□ -1.44
CD46-218ENST00000496723 FGF10O15520 208 aaPredicted RBP6.07□□□□□ -1.44
CD46-218ENST00000496723 ETFBP38117 255 aa6.07□□□□□ -1.44
CD46-218ENST00000496723 LIMS1P48059 325 aa6.07□□□□□ -1.44
CD46-218ENST00000496723 FOXO4P98177 505 aa6.07□□□□□ -1.44
CD46-218ENST00000496723 SLC7A5Q01650 507 aa6.07□□□□□ -1.44
CD46-218ENST00000496723 NAALADL2Q58DX5 795 aa6.07□□□□□ -1.44
CD46-218ENST00000496723 NOL9Q5SY16 702 aaKnown RBP6.07□□□□□ -1.44
CD46-218ENST00000496723 BICRALQ6AI39 1079 aa6.07□□□□□ -1.44
CD46-218ENST00000496723 SAPCD2Q86UD0 394 aa6.07□□□□□ -1.44
CD46-218ENST00000496723 FNIP1Q8TF40 1166 aa6.07□□□□□ -1.44
CD46-218ENST00000496723 BRF1Q92994 677 aa6.07□□□□□ -1.44
CD46-218ENST00000496723 GP6Q9HCN6 339 aa6.07□□□□□ -1.44
CD46-218ENST00000496723 SUSD2Q9UGT4 822 aa6.07□□□□□ -1.44
CD46-218ENST00000496723 ZNF451Q9Y4E5 1061 aa6.07□□□□□ -1.44
CD46-218ENST00000496723 SH3D21A4FU49 640 aa6.06□□□□□ -1.44
CD46-218ENST00000496723 TBC1D8O95759 1140 aa6.06□□□□□ -1.44
CD46-218ENST00000496723 NCAM1P13591 858 aa6.06□□□□□ -1.44
CD46-218ENST00000496723 CD247P20963 164 aa6.06□□□□□ -1.44
CD46-218ENST00000496723 RTP5Q14D33 572 aa6.06□□□□□ -1.44
CD46-218ENST00000496723 VWA3BQ502W6 1294 aa6.06□□□□□ -1.44
CD46-218ENST00000496723 VHLLQ6RSH7 139 aa6.06□□□□□ -1.44
CD46-218ENST00000496723 LIPIQ6XZB0 460 aa6.06□□□□□ -1.44
CD46-218ENST00000496723 GMLQ99445 158 aa6.06□□□□□ -1.44
CD46-218ENST00000496723 HAUS7Q99871 368 aa6.06□□□□□ -1.44
CD46-218ENST00000496723 ZNF408Q9H9D4 720 aa6.06□□□□□ -1.44
CD46-218ENST00000496723 FAN1Q9Y2M0 1017 aa6.06□□□□□ -1.44
CD46-218ENST00000496723 SF3B6Q9Y3B4 125 aaKnown RBP6.06□□□□□ -1.44
CD46-218ENST00000496723 FHOD1Q9Y613 1164 aa6.06□□□□□ -1.44
CD46-218ENST00000496723 H0Y8X5 98 aa6.05□□□□□ -1.44
CD46-218ENST00000496723 CBFA2T2O43439 604 aa6.05□□□□□ -1.44
CD46-218ENST00000496723 PRICKLE3O43900 615 aaPredicted RBP6.05□□□□□ -1.44
CD46-218ENST00000496723 ITGA4P13612 1032 aa6.05□□□□□ -1.44
CD46-218ENST00000496723 ZNF445P59923 1031 aa6.05□□□□□ -1.44
CD46-218ENST00000496723 HTRA3P83110 453 aa6.05□□□□□ -1.44
CD46-218ENST00000496723 PRR5P85299 388 aa6.05□□□□□ -1.44
CD46-218ENST00000496723 RBM10P98175 930 aaKnown RBP6.05□□□□□ -1.44
CD46-218ENST00000496723 TCEAL1Q15170 157 aa6.05□□□□□ -1.44
CD46-218ENST00000496723 TNNI3KQ59H18 835 aa6.05□□□□□ -1.44
CD46-218ENST00000496723 UBXN11Q5T124 520 aa6.05□□□□□ -1.44
CD46-218ENST00000496723 HEATR6Q6AI08 1181 aaKnown RBP6.05□□□□□ -1.44
CD46-218ENST00000496723 KIAA1211LQ6NV74 962 aa6.05□□□□□ -1.44
CD46-218ENST00000496723 KLHL6Q8WZ60 621 aa6.05□□□□□ -1.44
CD46-218ENST00000496723 USP40Q9NVE5 1235 aa6.05□□□□□ -1.44
CD46-218ENST00000496723 ACTR10Q9NZ32 417 aa6.05□□□□□ -1.44
CD46-218ENST00000496723 PRKAG3Q9UGI9 489 aa6.05□□□□□ -1.44
CD46-218ENST00000496723 PMF1-BGLAPU3KQ54 211 aa6.05□□□□□ -1.44
CD46-218ENST00000496723 A0A087WZG4 1122 aa6.04□□□□□ -1.44
CD46-218ENST00000496723 F8W031 263 aaPredicted RBP6.04□□□□□ -1.44
CD46-218ENST00000496723 EPHX1P07099 455 aa6.04□□□□□ -1.44
CD46-218ENST00000496723 ATF2P15336 505 aa6.04□□□□□ -1.44
CD46-218ENST00000496723 L1CAMP32004 1257 aa6.04□□□□□ -1.44
CD46-218ENST00000496723 LARP1BQ659C4 914 aaKnown RBP6.04□□□□□ -1.44
CD46-218ENST00000496723 ADAT2Q7Z6V5 191 aaKnown RBP6.04□□□□□ -1.44
CD46-218ENST00000496723 FIBCD1Q8N539 461 aa6.04□□□□□ -1.44
CD46-218ENST00000496723 PTCHD1Q96NR3 888 aa6.04□□□□□ -1.44
CD46-218ENST00000496723 FCRL3Q96P31 734 aaPredicted RBP6.04□□□□□ -1.44
CD46-218ENST00000496723 KLHL25Q9H0H3 589 aa6.04□□□□□ -1.44
CD46-218ENST00000496723 NOL6Q9H6R4 1146 aaKnown RBP6.04□□□□□ -1.44
CD46-218ENST00000496723 DBR1Q9UK59 544 aaKnown RBP6.04□□□□□ -1.44
CD46-218ENST00000496723 PALD1Q9ULE6 856 aa6.04□□□□□ -1.44
CD46-218ENST00000496723 MYRFQ9Y2G1 1151 aa6.04□□□□□ -1.44
CD46-218ENST00000496723 K7ESM1 405 aa6.03□□□□□ -1.44
CD46-218ENST00000496723 PLA2G1BP04054 148 aaKnown RBP6.03□□□□□ -1.44
CD46-218ENST00000496723 POU4F1Q01851 419 aa6.03□□□□□ -1.44
CD46-218ENST00000496723 NT5DC1Q5TFE4 455 aa6.03□□□□□ -1.44
CD46-218ENST00000496723 HHIPL2Q6UWX4 724 aa6.03□□□□□ -1.44
CD46-218ENST00000496723 B3GNT8Q7Z7M8 397 aa6.03□□□□□ -1.44
CD46-218ENST00000496723 ADCY4Q8NFM4 1077 aa6.03□□□□□ -1.44
CD46-218ENST00000496723 FGD4Q96M96 766 aa6.03□□□□□ -1.44
CD46-218ENST00000496723 GBP3Q9H0R5 595 aa6.03□□□□□ -1.44
CD46-218ENST00000496723 WHRNQ9P202 907 aa6.03□□□□□ -1.44
CD46-218ENST00000496723 PPM1BO75688 479 aa6.02□□□□□ -1.45
CD46-218ENST00000496723 PPP2R5DQ14738 602 aa6.02□□□□□ -1.45
CD46-218ENST00000496723 C6orf15Q6UXA7 325 aaPredicted RBP6.02□□□□□ -1.45
CD46-218ENST00000496723 ZDHHC15Q96MV8 337 aa6.02□□□□□ -1.45
CD46-218ENST00000496723 SPATA25Q9BR10 227 aa6.02□□□□□ -1.45
CD46-218ENST00000496723 TMPRSS5Q9H3S3 457 aa6.02□□□□□ -1.45
CD46-218ENST00000496723 DIS3Q9Y2L1 958 aaKnown RBP6.02□□□□□ -1.45
CD46-218ENST00000496723 SUGT1Q9Y2Z0 365 aa6.02□□□□□ -1.45
CD46-218ENST00000496723 R3HCC1Q9Y3T6 440 aaKnown RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms