RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 UBE2SQ16763 222 aa24.98■■□□□ 1.59
ECHDC3-205ENST00000496136 REXO1Q8N1G1 1221 aaKnown RBP24.98■■□□□ 1.59
ECHDC3-205ENST00000496136 SHCBP1Q8NEM2 672 aa24.98■■□□□ 1.59
ECHDC3-205ENST00000496136 RASGRP4Q8TDF6 673 aa24.98■■□□□ 1.59
ECHDC3-205ENST00000496136 TNFRSF25Q93038 417 aa24.98■■□□□ 1.59
ECHDC3-205ENST00000496136 MROH8Q9H579 483 aa24.98■■□□□ 1.59
ECHDC3-205ENST00000496136 EFCC1Q9HA90 598 aa24.98■■□□□ 1.59
ECHDC3-205ENST00000496136 THSD7BQ9C0I4 1608 aa24.98■■□□□ 1.59
ECHDC3-205ENST00000496136 GCOM1H8Y6P7 765 aaPredicted RBP24.98■■□□□ 1.59
ECHDC3-205ENST00000496136 TRPA1O75762 1119 aa24.98■■□□□ 1.59
ECHDC3-205ENST00000496136 POLR2MP0CAP2 368 aa24.98■■□□□ 1.59
ECHDC3-205ENST00000496136 TEX2Q8IWB9 1127 aa24.98■■□□□ 1.59
ECHDC3-205ENST00000496136 TBC1D8O95759 1140 aa24.97■■□□□ 1.59
ECHDC3-205ENST00000496136 HSD17B4P51659 736 aa24.97■■□□□ 1.59
ECHDC3-205ENST00000496136 GNL2Q13823 731 aaKnown RBP24.97■■□□□ 1.59
ECHDC3-205ENST00000496136 NSMFQ6X4W1 530 aa24.97■■□□□ 1.59
ECHDC3-205ENST00000496136 SAMD3Q8N6K7 520 aa24.97■■□□□ 1.59
ECHDC3-205ENST00000496136 CFHR5Q9BXR6 569 aa24.97■■□□□ 1.59
ECHDC3-205ENST00000496136 TMEM260Q9NX78 707 aa24.97■■□□□ 1.59
ECHDC3-205ENST00000496136 MAP3K20Q9NYL2 800 aaKnown RBP24.97■■□□□ 1.59
ECHDC3-205ENST00000496136 F13A1P00488 732 aa24.96■■□□□ 1.59
ECHDC3-205ENST00000496136 RPS6P62753 249 aaKnown RBP24.96■■□□□ 1.59
ECHDC3-205ENST00000496136 JAKMIP3Q5VZ66 844 aa24.96■■□□□ 1.59
ECHDC3-205ENST00000496136 RNF207Q6ZRF8 634 aa24.96■■□□□ 1.59
ECHDC3-205ENST00000496136 NOSTRINQ8IVI9 506 aa24.96■■□□□ 1.59
ECHDC3-205ENST00000496136 DNAJC5GQ8N7S2 189 aa24.96■■□□□ 1.59
ECHDC3-205ENST00000496136 ZSCAN16Q9H4T2 348 aaPredicted RBP24.96■■□□□ 1.59
ECHDC3-205ENST00000496136 A1CFQ9NQ94 594 aaKnown RBP24.96■■□□□ 1.59
ECHDC3-205ENST00000496136 CEP350Q5VT06 3117 aa24.95■■□□□ 1.59
ECHDC3-205ENST00000496136 RESTQ13127 1097 aa24.95■■□□□ 1.59
ECHDC3-205ENST00000496136 NOM1Q5C9Z4 860 aaKnown RBP24.95■■□□□ 1.59
ECHDC3-205ENST00000496136 MAF1Q9H063 256 aa24.95■■□□□ 1.59
ECHDC3-205ENST00000496136 BAATQ14032 418 aaPredicted RBP24.95■■□□□ 1.58
ECHDC3-205ENST00000496136 EARS2Q5JPH6 523 aaKnown RBP24.95■■□□□ 1.58
ECHDC3-205ENST00000496136 WDR78Q5VTH9 848 aa24.95■■□□□ 1.58
ECHDC3-205ENST00000496136 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.95■■□□□ 1.58
ECHDC3-205ENST00000496136 CCAR1Q8IX12 1150 aaKnown RBP24.95■■□□□ 1.58
ECHDC3-205ENST00000496136 CYP39A1Q9NYL5 469 aa24.95■■□□□ 1.58
ECHDC3-205ENST00000496136 FCHSD1Q86WN1 690 aa24.94■■□□□ 1.58
ECHDC3-205ENST00000496136 ANKRD35Q8N283 1001 aa24.94■■□□□ 1.58
ECHDC3-205ENST00000496136 ZNFX1Q9P2E3 1918 aaKnown RBP24.93■■□□□ 1.58
ECHDC3-205ENST00000496136 SLC30A10Q6XR72 485 aa24.93■■□□□ 1.58
ECHDC3-205ENST00000496136 SYTL5Q8TDW5 730 aaPredicted RBP24.93■■□□□ 1.58
ECHDC3-205ENST00000496136 COL20A1Q9P218 1284 aa24.93■■□□□ 1.58
ECHDC3-205ENST00000496136 FAM205CA6NFA0 338 aa24.93■■□□□ 1.58
ECHDC3-205ENST00000496136 FOSP01100 380 aaPredicted RBP24.93■■□□□ 1.58
ECHDC3-205ENST00000496136 MAPK4P31152 587 aa24.93■■□□□ 1.58
ECHDC3-205ENST00000496136 MCTP2Q6DN12 878 aa24.93■■□□□ 1.58
ECHDC3-205ENST00000496136 PIK3AP1Q6ZUJ8 805 aa24.93■■□□□ 1.58
ECHDC3-205ENST00000496136 BRAPQ7Z569 592 aa24.93■■□□□ 1.58
ECHDC3-205ENST00000496136 PGBD1Q96JS3 809 aa24.93■■□□□ 1.58
ECHDC3-205ENST00000496136 DOCK3Q8IZD9 2030 aa24.92■■□□□ 1.58
ECHDC3-205ENST00000496136 CCDC194A0A1B0GVG4 234 aa24.92■■□□□ 1.58
ECHDC3-205ENST00000496136 FCER1AP12319 257 aa24.92■■□□□ 1.58
ECHDC3-205ENST00000496136 AP3B2Q13367 1082 aa24.92■■□□□ 1.58
ECHDC3-205ENST00000496136 FAM173BQ6P4H8 233 aa24.92■■□□□ 1.58
ECHDC3-205ENST00000496136 KRT25Q7Z3Z0 450 aa24.92■■□□□ 1.58
ECHDC3-205ENST00000496136 RBBP6Q7Z6E9 1792 aaKnown RBP24.92■■□□□ 1.58
ECHDC3-205ENST00000496136 SPDYE3A6NKU9 549 aa24.91■■□□□ 1.58
ECHDC3-205ENST00000496136 PFASO15067 1338 aa24.91■■□□□ 1.58
ECHDC3-205ENST00000496136 STRNO43815 780 aa24.91■■□□□ 1.58
ECHDC3-205ENST00000496136 MAP2K1Q02750 393 aaPredicted RBP24.91■■□□□ 1.58
ECHDC3-205ENST00000496136 KCTD2Q14681 263 aa24.91■■□□□ 1.58
ECHDC3-205ENST00000496136 GPR142Q7Z601 462 aa24.91■■□□□ 1.58
ECHDC3-205ENST00000496136 PURBQ96QR8 312 aaKnown RBP24.91■■□□□ 1.58
ECHDC3-205ENST00000496136 MMP19Q99542 508 aa24.91■■□□□ 1.58
ECHDC3-205ENST00000496136 TAAR1Q96RJ0 339 aa24.9■■□□□ 1.58
ECHDC3-205ENST00000496136 NONOQ15233 471 aaKnown RBP eCLIP24.9■■□□□ 1.58
ECHDC3-205ENST00000496136 ANO3Q9BYT9 981 aa24.9■■□□□ 1.58
ECHDC3-205ENST00000496136 SAGE1Q9NXZ1 904 aa24.9■■□□□ 1.58
ECHDC3-205ENST00000496136 ECM2O94769 699 aaPredicted RBP24.89■■□□□ 1.57
ECHDC3-205ENST00000496136 MYSM1Q5VVJ2 828 aa24.89■■□□□ 1.57
ECHDC3-205ENST00000496136 PLEKHH3Q7Z736 793 aa24.89■■□□□ 1.57
ECHDC3-205ENST00000496136 ABRAQ8N0Z2 381 aa24.89■■□□□ 1.57
ECHDC3-205ENST00000496136 TBCKQ8TEA7 893 aa24.89■■□□□ 1.57
ECHDC3-205ENST00000496136 IVNS1ABPQ9Y6Y0 642 aa24.89■■□□□ 1.57
ECHDC3-205ENST00000496136 PTPREP23469 700 aa24.88■■□□□ 1.57
ECHDC3-205ENST00000496136 CNTN2Q02246 1040 aa24.88■■□□□ 1.57
ECHDC3-205ENST00000496136 INF2Q27J81 1249 aa24.88■■□□□ 1.57
ECHDC3-205ENST00000496136 FOXD4L6Q3SYB3 417 aaPredicted RBP24.88■■□□□ 1.57
ECHDC3-205ENST00000496136 FOXD4L3Q6VB84 417 aaPredicted RBP24.88■■□□□ 1.57
ECHDC3-205ENST00000496136 MYH7BA7E2Y1 1941 aa24.88■■□□□ 1.57
ECHDC3-205ENST00000496136 DNAJC25-GNG10A0A024R161 153 aa24.88■■□□□ 1.57
ECHDC3-205ENST00000496136 PGK2P07205 417 aa24.88■■□□□ 1.57
ECHDC3-205ENST00000496136 TOB1P50616 345 aaPredicted RBP24.88■■□□□ 1.57
ECHDC3-205ENST00000496136 SP3Q02447 781 aa24.88■■□□□ 1.57
ECHDC3-205ENST00000496136 RMDN3Q96TC7 470 aa24.88■■□□□ 1.57
ECHDC3-205ENST00000496136 ATP6V1DQ9Y5K8 247 aa24.88■■□□□ 1.57
ECHDC3-205ENST00000496136 POTEB2H3BUK9 544 aa24.87■■□□□ 1.57
ECHDC3-205ENST00000496136 EDIL3O43854 480 aa24.87■■□□□ 1.57
ECHDC3-205ENST00000496136 CTGFP29279 349 aa24.87■■□□□ 1.57
ECHDC3-205ENST00000496136 LACTBP83111 547 aaPredicted RBP24.87■■□□□ 1.57
ECHDC3-205ENST00000496136 FAM133AQ8N9E0 248 aa24.87■■□□□ 1.57
ECHDC3-205ENST00000496136 CRYGNQ8WXF5 182 aa24.87■■□□□ 1.57
ECHDC3-205ENST00000496136 TNPO1Q92973 898 aaKnown RBP24.87■■□□□ 1.57
ECHDC3-205ENST00000496136 PLXNB2O15031 1838 aa24.87■■□□□ 1.57
ECHDC3-205ENST00000496136 ADORA2AP29274 412 aa24.86■■□□□ 1.57
ECHDC3-205ENST00000496136 SREBF1P36956 1147 aa24.86■■□□□ 1.57
ECHDC3-205ENST00000496136 GRB14Q14449 540 aa24.86■■□□□ 1.57
ECHDC3-205ENST00000496136 RILPL1Q5EBL4 403 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms