RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 SLC26A8Q96RN1 970 aa8.45□□□□□ -1.06
CCDC39-207ENST00000495817 JMJD8Q96S16 334 aa8.45□□□□□ -1.06
CCDC39-207ENST00000495817 PLCD4Q9BRC7 762 aa8.45□□□□□ -1.06
CCDC39-207ENST00000495817 MCMBPQ9BTE3 642 aa8.45□□□□□ -1.06
CCDC39-207ENST00000495817 NSUN3Q9H649 340 aaKnown RBP8.45□□□□□ -1.06
CCDC39-207ENST00000495817 DCP1AQ9NPI6 582 aaPredicted RBP8.45□□□□□ -1.06
CCDC39-207ENST00000495817 VAMP4O75379 141 aa8.44□□□□□ -1.06
CCDC39-207ENST00000495817 MESP2Q0VG99 397 aa8.44□□□□□ -1.06
CCDC39-207ENST00000495817 DPY19L1Q2PZI1 675 aa8.44□□□□□ -1.06
CCDC39-207ENST00000495817 C16orf86Q6ZW13 317 aa8.44□□□□□ -1.06
CCDC39-207ENST00000495817 ZNF227Q86WZ6 799 aa8.44□□□□□ -1.06
CCDC39-207ENST00000495817 ZBTB38Q8NAP3 1195 aaPredicted RBP8.44□□□□□ -1.06
CCDC39-207ENST00000495817 COPS5Q92905 334 aa8.44□□□□□ -1.06
CCDC39-207ENST00000495817 PPP1R14AQ96A00 147 aa8.44□□□□□ -1.06
CCDC39-207ENST00000495817 PPP1R16BQ96T49 567 aa8.44□□□□□ -1.06
CCDC39-207ENST00000495817 SLC38A3Q99624 504 aa8.44□□□□□ -1.06
CCDC39-207ENST00000495817 SLKQ9H2G2 1235 aaPredicted RBP8.44□□□□□ -1.06
CCDC39-207ENST00000495817 NKX2-4Q9H2Z4 354 aa8.44□□□□□ -1.06
CCDC39-207ENST00000495817 PTCH2Q9Y6C5 1203 aa8.44□□□□□ -1.06
CCDC39-207ENST00000495817 OR14I1A6ND48 311 aa8.43□□□□□ -1.06
CCDC39-207ENST00000495817 ADCY3O60266 1144 aa8.43□□□□□ -1.06
CCDC39-207ENST00000495817 EFEMP2O95967 443 aa8.43□□□□□ -1.06
CCDC39-207ENST00000495817 L1CAMP32004 1257 aa8.43□□□□□ -1.06
CCDC39-207ENST00000495817 ERVFRD-1P60508 538 aa8.43□□□□□ -1.06
CCDC39-207ENST00000495817 OLFML2BQ68BL8 750 aa8.43□□□□□ -1.06
CCDC39-207ENST00000495817 GTF2IRD2BQ6EKJ0 949 aa8.43□□□□□ -1.06
CCDC39-207ENST00000495817 GTF2IRD2Q86UP8 949 aa8.43□□□□□ -1.06
CCDC39-207ENST00000495817 NUP43Q8NFH3 380 aa8.43□□□□□ -1.06
CCDC39-207ENST00000495817 NLGN2Q8NFZ4 835 aa8.43□□□□□ -1.06
CCDC39-207ENST00000495817 DIRC2Q96SL1 478 aa8.43□□□□□ -1.06
CCDC39-207ENST00000495817 CYP26B1Q9NR63 512 aa8.43□□□□□ -1.06
CCDC39-207ENST00000495817 LRP2BPQ9P2M1 347 aa8.43□□□□□ -1.06
CCDC39-207ENST00000495817 IMPACTQ9P2X3 320 aa8.43□□□□□ -1.06
CCDC39-207ENST00000495817 CCDC163A0A0D9SF12 145 aa8.42□□□□□ -1.06
CCDC39-207ENST00000495817 A0A1W2PQ27 194 aa8.42□□□□□ -1.06
CCDC39-207ENST00000495817 A0A1W2PQ64 194 aa8.42□□□□□ -1.06
CCDC39-207ENST00000495817 A0A1W2PQC6 194 aa8.42□□□□□ -1.06
CCDC39-207ENST00000495817 A0A1W2PQD8 194 aa8.42□□□□□ -1.06
CCDC39-207ENST00000495817 PEX10O60683 326 aa8.42□□□□□ -1.06
CCDC39-207ENST00000495817 ITGAVP06756 1048 aa8.42□□□□□ -1.06
CCDC39-207ENST00000495817 FAM153BP0C7A2 387 aa8.42□□□□□ -1.06
CCDC39-207ENST00000495817 PRKCAP17252 672 aa8.42□□□□□ -1.06
CCDC39-207ENST00000495817 PDE6BP35913 854 aa8.42□□□□□ -1.06
CCDC39-207ENST00000495817 TAF7LQ5H9L4 462 aa8.42□□□□□ -1.06
CCDC39-207ENST00000495817 ADGRF1Q5T601 910 aa8.42□□□□□ -1.06
CCDC39-207ENST00000495817 RNF187Q5TA31 235 aaPredicted RBP8.42□□□□□ -1.06
CCDC39-207ENST00000495817 CCDC140Q96MF4 163 aa8.42□□□□□ -1.06
CCDC39-207ENST00000495817 FEZ1Q99689 392 aa8.42□□□□□ -1.06
CCDC39-207ENST00000495817 PRKAB1Q9Y478 270 aa8.42□□□□□ -1.06
CCDC39-207ENST00000495817 ABLIM1O14639 778 aa8.41□□□□□ -1.06
CCDC39-207ENST00000495817 PAMP19021 973 aa8.41□□□□□ -1.06
CCDC39-207ENST00000495817 CYP4F8P98187 520 aa8.41□□□□□ -1.06
CCDC39-207ENST00000495817 TMEM62Q0P6H9 643 aa8.41□□□□□ -1.06
CCDC39-207ENST00000495817 SCRN1Q12765 414 aa8.41□□□□□ -1.06
CCDC39-207ENST00000495817 PKN1Q16512 942 aa8.41□□□□□ -1.06
CCDC39-207ENST00000495817 ZNF552Q9H707 407 aaPredicted RBP8.41□□□□□ -1.06
CCDC39-207ENST00000495817 TNFRSF12AQ9NP84 129 aa8.41□□□□□ -1.06
CCDC39-207ENST00000495817 NPHP3-ACAD11A0A0J9YXS1 232 aa8.4□□□□□ -1.06
CCDC39-207ENST00000495817 A0A1W2PQU0 124 aa8.4□□□□□ -1.06
CCDC39-207ENST00000495817 SEMA7AO75326 666 aa8.4□□□□□ -1.06
CCDC39-207ENST00000495817 HOXC12P31275 282 aa8.4□□□□□ -1.06
CCDC39-207ENST00000495817 HSP90AA2PQ14568 343 aaPredicted RBP8.4□□□□□ -1.06
CCDC39-207ENST00000495817 TCEA2Q15560 299 aa8.4□□□□□ -1.06
CCDC39-207ENST00000495817 ANKRD13AQ8IZ07 590 aa8.4□□□□□ -1.06
CCDC39-207ENST00000495817 BTN2A2Q8WVV5 523 aa8.4□□□□□ -1.06
CCDC39-207ENST00000495817 GOLGA2P5Q9HBQ8 144 aa8.4□□□□□ -1.06
CCDC39-207ENST00000495817 PDLIM7Q9NR12 457 aa8.4□□□□□ -1.06
CCDC39-207ENST00000495817 SRGAP3O43295 1099 aa8.39□□□□□ -1.07
CCDC39-207ENST00000495817 TSPAN15O95858 294 aa8.39□□□□□ -1.07
CCDC39-207ENST00000495817 CPP00450 1065 aa8.39□□□□□ -1.07
CCDC39-207ENST00000495817 MPOP05164 745 aa8.39□□□□□ -1.07
CCDC39-207ENST00000495817 SCG5P05408 212 aa8.39□□□□□ -1.07
CCDC39-207ENST00000495817 ZNF648Q5T619 568 aaPredicted RBP8.39□□□□□ -1.07
CCDC39-207ENST00000495817 SIRT2Q8IXJ6 389 aa8.39□□□□□ -1.07
CCDC39-207ENST00000495817 MMP19Q99542 508 aa8.39□□□□□ -1.07
CCDC39-207ENST00000495817 C8AP07357 584 aa8.38□□□□□ -1.07
CCDC39-207ENST00000495817 GALK1P51570 392 aa8.38□□□□□ -1.07
CCDC39-207ENST00000495817 YBX1P67809 324 aaKnown RBP8.38□□□□□ -1.07
CCDC39-207ENST00000495817 MVKQ03426 396 aa8.38□□□□□ -1.07
CCDC39-207ENST00000495817 E4F1Q66K89 784 aaPredicted RBP8.38□□□□□ -1.07
CCDC39-207ENST00000495817 IQCEQ6IPM2 695 aa8.38□□□□□ -1.07
CCDC39-207ENST00000495817 ZNF605Q86T29 641 aa8.38□□□□□ -1.07
CCDC39-207ENST00000495817 BRINP2Q9C0B6 783 aa8.38□□□□□ -1.07
CCDC39-207ENST00000495817 ARHGEF4Q9NR80 690 aa8.38□□□□□ -1.07
CCDC39-207ENST00000495817 TRAV20A0A0B4J274 112 aa8.37□□□□□ -1.07
CCDC39-207ENST00000495817 A0A1W2PQJ5 194 aa8.37□□□□□ -1.07
CCDC39-207ENST00000495817 PPP1R12AO14974 1030 aaPredicted RBP8.37□□□□□ -1.07
CCDC39-207ENST00000495817 ASMTLO95671 621 aa8.37□□□□□ -1.07
CCDC39-207ENST00000495817 CAPNS1P04632 268 aa8.37□□□□□ -1.07
CCDC39-207ENST00000495817 THBDP07204 575 aa8.37□□□□□ -1.07
CCDC39-207ENST00000495817 SNRPB2P08579 225 aaKnown RBP8.37□□□□□ -1.07
CCDC39-207ENST00000495817 GLDCP23378 1020 aa8.37□□□□□ -1.07
CCDC39-207ENST00000495817 GYS2P54840 703 aa8.37□□□□□ -1.07
CCDC39-207ENST00000495817 NR1I3Q14994 352 aa8.37□□□□□ -1.07
CCDC39-207ENST00000495817 TESK1Q15569 626 aa8.37□□□□□ -1.07
CCDC39-207ENST00000495817 ACBD5Q5T8D3 534 aaPredicted RBP8.37□□□□□ -1.07
CCDC39-207ENST00000495817 NPLOC4Q8TAT6 608 aa8.37□□□□□ -1.07
CCDC39-207ENST00000495817 AARSD1Q9BTE6 412 aaKnown RBP8.37□□□□□ -1.07
CCDC39-207ENST00000495817 PLAAQ9Y263 795 aa8.37□□□□□ -1.07
CCDC39-207ENST00000495817 TEX51A0A1B0GUA7 166 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms