RNA–Protein interactions for RNA: ENST00000495777.5

SORT1-208, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 391 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-208ENST00000495777 XIRP2A4UGR9 3374 aa10.38□□□□□ -0.75
SORT1-208ENST00000495777 RBM47A0AV96 593 aaKnown RBP10.38□□□□□ -0.75
SORT1-208ENST00000495777 TNFRSF10AO00220 468 aa10.38□□□□□ -0.75
SORT1-208ENST00000495777 MX1P20591 662 aa10.38□□□□□ -0.75
SORT1-208ENST00000495777 CCL23P55773 120 aa10.38□□□□□ -0.75
SORT1-208ENST00000495777 PSMC6P62333 389 aa10.38□□□□□ -0.75
SORT1-208ENST00000495777 CTDSPL2Q05D32 466 aa10.38□□□□□ -0.75
SORT1-208ENST00000495777 ALX1Q15699 326 aa10.38□□□□□ -0.75
SORT1-208ENST00000495777 ANKRD45Q5TZF3 282 aa10.38□□□□□ -0.75
SORT1-208ENST00000495777 B4GALNT3Q6L9W6 998 aa10.38□□□□□ -0.75
SORT1-208ENST00000495777 EEPD1Q7L9B9 569 aa10.38□□□□□ -0.75
SORT1-208ENST00000495777 OTOP2Q7RTS6 562 aa10.38□□□□□ -0.75
SORT1-208ENST00000495777 ASB2Q96Q27 587 aa10.38□□□□□ -0.75
SORT1-208ENST00000495777 PURBQ96QR8 312 aaKnown RBP10.38□□□□□ -0.75
SORT1-208ENST00000495777 ALDH8A1Q9H2A2 487 aaPredicted RBP10.38□□□□□ -0.75
SORT1-208ENST00000495777 NKX2-4Q9H2Z4 354 aa10.38□□□□□ -0.75
SORT1-208ENST00000495777 THEGQ9P2T0 379 aa10.38□□□□□ -0.75
SORT1-208ENST00000495777 MYH4Q9Y623 1939 aa10.38□□□□□ -0.75
SORT1-208ENST00000495777 NFIBO00712 420 aa10.37□□□□□ -0.75
SORT1-208ENST00000495777 PFKMP08237 780 aa10.37□□□□□ -0.75
SORT1-208ENST00000495777 SUPT20HL2P0C7V6 817 aa10.37□□□□□ -0.75
SORT1-208ENST00000495777 ALDH5A1P51649 535 aaPredicted RBP10.37□□□□□ -0.75
SORT1-208ENST00000495777 PURAQ00577 322 aaKnown RBP10.37□□□□□ -0.75
SORT1-208ENST00000495777 BAATQ14032 418 aaPredicted RBP10.37□□□□□ -0.75
SORT1-208ENST00000495777 VPS53Q5VIR6 699 aa10.37□□□□□ -0.75
SORT1-208ENST00000495777 TTBK2Q6IQ55 1244 aa10.37□□□□□ -0.75
SORT1-208ENST00000495777 NSMFQ6X4W1 530 aa10.37□□□□□ -0.75
SORT1-208ENST00000495777 KIAA1211Q6ZU35 1233 aa10.37□□□□□ -0.75
SORT1-208ENST00000495777 RPUSD2Q8IZ73 545 aaKnown RBP10.37□□□□□ -0.75
SORT1-208ENST00000495777 CLEC4DQ8WXI8 215 aa10.37□□□□□ -0.75
SORT1-208ENST00000495777 CHMP4CQ96CF2 233 aa10.37□□□□□ -0.75
SORT1-208ENST00000495777 WDR11Q9BZH6 1224 aa10.37□□□□□ -0.75
SORT1-208ENST00000495777 SLC28A3Q9HAS3 691 aa10.37□□□□□ -0.75
SORT1-208ENST00000495777 TCP11L1Q9NUJ3 509 aa10.37□□□□□ -0.75
SORT1-208ENST00000495777 POLR3EQ9NVU0 708 aa10.37□□□□□ -0.75
SORT1-208ENST00000495777 ADD3Q9UEY8 706 aaKnown RBP10.37□□□□□ -0.75
SORT1-208ENST00000495777 PCDHA11Q9Y5I1 949 aa10.37□□□□□ -0.75
SORT1-208ENST00000495777 MCM3APO60318 1980 aa10.37□□□□□ -0.75
SORT1-208ENST00000495777 ZMYM6O95789 1325 aa10.36□□□□□ -0.75
SORT1-208ENST00000495777 BDP1A6H8Y1 2624 aa10.36□□□□□ -0.75
SORT1-208ENST00000495777 RANBP6O60518 1105 aaKnown RBP10.36□□□□□ -0.75
SORT1-208ENST00000495777 TOP1P11387 765 aaKnown RBP10.36□□□□□ -0.75
SORT1-208ENST00000495777 EDNRBP24530 442 aa10.36□□□□□ -0.75
SORT1-208ENST00000495777 MRPS5P82675 430 aaKnown RBP10.36□□□□□ -0.75
SORT1-208ENST00000495777 CCDC96Q2M329 555 aa10.36□□□□□ -0.75
SORT1-208ENST00000495777 SYDE2Q5VT97 1194 aa10.36□□□□□ -0.75
SORT1-208ENST00000495777 TICAM2Q86XR7 235 aa10.36□□□□□ -0.75
SORT1-208ENST00000495777 PPM1EQ8WY54 764 aa10.36□□□□□ -0.75
SORT1-208ENST00000495777 SCLYQ96I15 445 aa10.36□□□□□ -0.75
SORT1-208ENST00000495777 TMEM47Q9BQJ4 181 aa10.36□□□□□ -0.75
SORT1-208ENST00000495777 HELLSQ9NRZ9 838 aa10.36□□□□□ -0.75
SORT1-208ENST00000495777 TRMT13Q9NUP7 481 aaKnown RBP10.36□□□□□ -0.75
SORT1-208ENST00000495777 SLC4A7Q9Y6M7 1214 aa10.36□□□□□ -0.75
SORT1-208ENST00000495777 TNKSO95271 1327 aa10.35□□□□□ -0.75
SORT1-208ENST00000495777 WDR19Q8NEZ3 1342 aa10.35□□□□□ -0.75
SORT1-208ENST00000495777 FGAP02671 866 aa10.35□□□□□ -0.75
SORT1-208ENST00000495777 SNHG28P0DPA3 235 aa10.35□□□□□ -0.75
SORT1-208ENST00000495777 PDHBP11177 359 aa10.35□□□□□ -0.75
SORT1-208ENST00000495777 ATP2A2P16615 1042 aaKnown RBP10.35□□□□□ -0.75
SORT1-208ENST00000495777 POU3F3P20264 500 aaPredicted RBP10.35□□□□□ -0.75
SORT1-208ENST00000495777 IGFBP4P22692 258 aa10.35□□□□□ -0.75
SORT1-208ENST00000495777 SLC16A2P36021 539 aa10.35□□□□□ -0.75
SORT1-208ENST00000495777 CPT1AP50416 773 aa10.35□□□□□ -0.75
SORT1-208ENST00000495777 RABGGTBP53611 331 aa10.35□□□□□ -0.75
SORT1-208ENST00000495777 PPP2R2DQ66LE6 453 aa10.35□□□□□ -0.75
SORT1-208ENST00000495777 SLC30A10Q6XR72 485 aa10.35□□□□□ -0.75
SORT1-208ENST00000495777 ADAMTS19Q8TE59 1207 aa10.35□□□□□ -0.75
SORT1-208ENST00000495777 EVI5LQ96CN4 794 aa10.35□□□□□ -0.75
SORT1-208ENST00000495777 MTG1Q9BT17 334 aaPredicted RBP10.35□□□□□ -0.75
SORT1-208ENST00000495777 OSBPL3Q9H4L5 887 aa10.35□□□□□ -0.75
SORT1-208ENST00000495777 PNMA2Q9UL42 364 aa10.35□□□□□ -0.75
SORT1-208ENST00000495777 A6NJR5 290 aa10.34□□□□□ -0.75
SORT1-208ENST00000495777 PITPNM1O00562 1244 aa10.34□□□□□ -0.75
SORT1-208ENST00000495777 NKRFO15226 690 aaKnown RBP eCLIP10.34□□□□□ -0.75
SORT1-208ENST00000495777 KPNA6O60684 536 aa10.34□□□□□ -0.75
SORT1-208ENST00000495777 CYP2C9P11712 490 aa10.34□□□□□ -0.75
SORT1-208ENST00000495777 MYOGP15173 224 aa10.34□□□□□ -0.75
SORT1-208ENST00000495777 RFC2P35250 354 aa10.34□□□□□ -0.75
SORT1-208ENST00000495777 PTPN11Q06124 597 aaPredicted RBP10.34□□□□□ -0.75
SORT1-208ENST00000495777 ZNF543Q08ER8 600 aa10.34□□□□□ -0.75
SORT1-208ENST00000495777 TTLL4Q14679 1199 aa10.34□□□□□ -0.75
SORT1-208ENST00000495777 CCDC85BQ15834 202 aaPredicted RBP10.34□□□□□ -0.75
SORT1-208ENST00000495777 NFRKBQ6P4R8 1299 aa10.34□□□□□ -0.75
SORT1-208ENST00000495777 DNERQ8NFT8 737 aa10.34□□□□□ -0.75
SORT1-208ENST00000495777 OR6J1Q8NGC5 347 aa10.34□□□□□ -0.75
SORT1-208ENST00000495777 TTC14Q96N46 770 aa10.34□□□□□ -0.75
SORT1-208ENST00000495777 LNPKQ9C0E8 428 aa10.34□□□□□ -0.75
SORT1-208ENST00000495777 MTMR7Q9Y216 660 aa10.34□□□□□ -0.75
SORT1-208ENST00000495777 LCTP09848 1927 aa10.34□□□□□ -0.75
SORT1-208ENST00000495777 FRMPD2Q68DX3 1309 aaPredicted RBP10.33□□□□□ -0.76
SORT1-208ENST00000495777 TRANK1O15050 2925 aa10.33□□□□□ -0.76
SORT1-208ENST00000495777 A0A0D9SFI3 127 aa10.33□□□□□ -0.76
SORT1-208ENST00000495777 PTPDC1A2A3K4 754 aa10.33□□□□□ -0.76
SORT1-208ENST00000495777 ZBBXA8MT70 800 aa10.33□□□□□ -0.76
SORT1-208ENST00000495777 MYL3P08590 195 aa10.33□□□□□ -0.76
SORT1-208ENST00000495777 HSPD1P10809 573 aaKnown RBP10.33□□□□□ -0.76
SORT1-208ENST00000495777 PCP11498 1178 aaKnown RBP10.33□□□□□ -0.76
SORT1-208ENST00000495777 CALML3P27482 149 aa10.33□□□□□ -0.76
SORT1-208ENST00000495777 PDE1AP54750 535 aa10.33□□□□□ -0.76
SORT1-208ENST00000495777 RPS6P62753 249 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms