RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 ALDH1B1P30837 517 aa17.18■□□□□ 0.34
CALD1-222ENST00000495522 SCNN1DP51172 638 aa17.18■□□□□ 0.34
CALD1-222ENST00000495522 DOK7Q18PE1 504 aa17.18■□□□□ 0.34
CALD1-222ENST00000495522 CDC42EP5Q6NZY7 148 aa17.18■□□□□ 0.34
CALD1-222ENST00000495522 CNNM4Q6P4Q7 775 aa17.18■□□□□ 0.34
CALD1-222ENST00000495522 PROM2Q8N271 834 aa17.18■□□□□ 0.34
CALD1-222ENST00000495522 NLGN1Q8N2Q7 840 aa17.18■□□□□ 0.34
CALD1-222ENST00000495522 TEKT1Q969V4 418 aa17.18■□□□□ 0.34
CALD1-222ENST00000495522 DUSP9Q99956 384 aaKnown RBP17.18■□□□□ 0.34
CALD1-222ENST00000495522 RAB34Q9BZG1 259 aa17.18■□□□□ 0.34
CALD1-222ENST00000495522 JMJD4Q9H9V9 463 aa17.18■□□□□ 0.34
CALD1-222ENST00000495522 RIC8AQ9NPQ8 531 aa17.18■□□□□ 0.34
CALD1-222ENST00000495522 STK17AQ9UEE5 414 aa17.18■□□□□ 0.34
CALD1-222ENST00000495522 LRWD1Q9UFC0 647 aa17.18■□□□□ 0.34
CALD1-222ENST00000495522 PES1O00541 588 aaKnown RBP17.18■□□□□ 0.34
CALD1-222ENST00000495522 DNM2P50570 870 aa17.18■□□□□ 0.34
CALD1-222ENST00000495522 CLCN6P51797 869 aa17.18■□□□□ 0.34
CALD1-222ENST00000495522 COBLL1Q53SF7 1204 aa17.18■□□□□ 0.34
CALD1-222ENST00000495522 SV2BQ7L1I2 683 aa17.18■□□□□ 0.34
CALD1-222ENST00000495522 FAM114A1Q8IWE2 563 aa17.18■□□□□ 0.34
CALD1-222ENST00000495522 ADGRF4Q8IZF3 695 aa17.18■□□□□ 0.34
CALD1-222ENST00000495522 ACRBPQ8NEB7 543 aa17.18■□□□□ 0.34
CALD1-222ENST00000495522 MXD3Q9BW11 206 aa17.18■□□□□ 0.34
CALD1-222ENST00000495522 ZNF446Q9NWS9 450 aa17.18■□□□□ 0.34
CALD1-222ENST00000495522 NRXN2Q9P2S2 1712 aa17.18■□□□□ 0.34
CALD1-222ENST00000495522 A0A0U1RQJ8 604 aa17.17■□□□□ 0.34
CALD1-222ENST00000495522 G3V3G9 751 aa17.17■□□□□ 0.34
CALD1-222ENST00000495522 SLC37A4O43826 429 aa17.17■□□□□ 0.34
CALD1-222ENST00000495522 STK4Q13043 487 aa17.17■□□□□ 0.34
CALD1-222ENST00000495522 GRB10Q13322 594 aa17.17■□□□□ 0.34
CALD1-222ENST00000495522 GPATCH4Q5T3I0 446 aaKnown RBP17.17■□□□□ 0.34
CALD1-222ENST00000495522 DCAF8Q5TAQ9 597 aa17.17■□□□□ 0.34
CALD1-222ENST00000495522 ATRIPQ8WXE1 791 aa17.17■□□□□ 0.34
CALD1-222ENST00000495522 TMX4Q9H1E5 349 aaPredicted RBP17.17■□□□□ 0.34
CALD1-222ENST00000495522 TTC26A0AVF1 554 aa17.16■□□□□ 0.34
CALD1-222ENST00000495522 TDP2O95551 362 aa17.16■□□□□ 0.34
CALD1-222ENST00000495522 PDIA5Q14554 519 aa17.16■□□□□ 0.34
CALD1-222ENST00000495522 APOBEC3HQ6NTF7 200 aaKnown RBP17.16■□□□□ 0.34
CALD1-222ENST00000495522 KRT222Q8N1A0 295 aa17.16■□□□□ 0.34
CALD1-222ENST00000495522 OR8K1Q8NGG5 319 aa17.16■□□□□ 0.34
CALD1-222ENST00000495522 CDK5RAP3Q96JB5 506 aa17.16■□□□□ 0.34
CALD1-222ENST00000495522 TUBGCP2Q9BSJ2 902 aa17.16■□□□□ 0.34
CALD1-222ENST00000495522 FAM53CQ9NYF3 392 aa17.16■□□□□ 0.34
CALD1-222ENST00000495522 LUC7L2Q9Y383 392 aaKnown RBP17.16■□□□□ 0.34
CALD1-222ENST00000495522 FCER1AP12319 257 aa17.16■□□□□ 0.34
CALD1-222ENST00000495522 PDE6BP35913 854 aa17.16■□□□□ 0.34
CALD1-222ENST00000495522 TNNI2P48788 182 aa17.16■□□□□ 0.34
CALD1-222ENST00000495522 ZNF569Q5MCW4 686 aa17.16■□□□□ 0.34
CALD1-222ENST00000495522 ANKRD40Q6AI12 368 aa17.16■□□□□ 0.34
CALD1-222ENST00000495522 BBXQ8WY36 941 aaPredicted RBP17.16■□□□□ 0.34
CALD1-222ENST00000495522 DNAJC7Q99615 494 aa17.16■□□□□ 0.34
CALD1-222ENST00000495522 EHD4Q9H223 541 aa17.16■□□□□ 0.34
CALD1-222ENST00000495522 CAPN11Q9UMQ6 739 aa17.16■□□□□ 0.34
CALD1-222ENST00000495522 GREB1LQ9C091 1923 aaPredicted RBP17.16■□□□□ 0.34
CALD1-222ENST00000495522 ADAMTSL1Q8N6G6 1762 aa17.15■□□□□ 0.34
CALD1-222ENST00000495522 MPHOSPH10O00566 681 aaKnown RBP17.15■□□□□ 0.34
CALD1-222ENST00000495522 EDIL3O43854 480 aa17.15■□□□□ 0.34
CALD1-222ENST00000495522 ZSCAN20P17040 1043 aaPredicted RBP17.15■□□□□ 0.34
CALD1-222ENST00000495522 TUBB2AQ13885 445 aa17.15■□□□□ 0.34
CALD1-222ENST00000495522 BMS1Q14692 1282 aaKnown RBP17.15■□□□□ 0.34
CALD1-222ENST00000495522 CCDC96Q2M329 555 aa17.15■□□□□ 0.34
CALD1-222ENST00000495522 PPP4R3AQ6IN85 833 aa17.15■□□□□ 0.34
CALD1-222ENST00000495522 RSRC2Q7L4I2 434 aaKnown RBP17.15■□□□□ 0.34
CALD1-222ENST00000495522 CUL5Q93034 780 aa17.15■□□□□ 0.34
CALD1-222ENST00000495522 PNMA5Q96PV4 448 aa17.15■□□□□ 0.34
CALD1-222ENST00000495522 TUBB2BQ9BVA1 445 aa17.15■□□□□ 0.34
CALD1-222ENST00000495522 BLOC1S4Q9NUP1 217 aa17.15■□□□□ 0.34
CALD1-222ENST00000495522 B4DLN1 442 aa17.15■□□□□ 0.34
CALD1-222ENST00000495522 PPP1R11O60927 126 aaPredicted RBP17.15■□□□□ 0.34
CALD1-222ENST00000495522 CLK2P49760 499 aaKnown RBP17.15■□□□□ 0.34
CALD1-222ENST00000495522 TSR1Q2NL82 804 aaKnown RBP17.15■□□□□ 0.34
CALD1-222ENST00000495522 TTBK2Q6IQ55 1244 aa17.15■□□□□ 0.34
CALD1-222ENST00000495522 GPR161Q8N6U8 529 aaKnown RBP17.15■□□□□ 0.34
CALD1-222ENST00000495522 LARP4BQ92615 738 aaKnown RBP17.15■□□□□ 0.34
CALD1-222ENST00000495522 GOLGA1Q92805 767 aa17.15■□□□□ 0.34
CALD1-222ENST00000495522 CNOT6LQ96LI5 555 aaKnown RBP17.15■□□□□ 0.34
CALD1-222ENST00000495522 CCDC17Q96LX7 622 aa17.15■□□□□ 0.34
CALD1-222ENST00000495522 MYO1AQ9UBC5 1043 aa17.15■□□□□ 0.34
CALD1-222ENST00000495522 PVALEFA0A1B0GWK0 134 aa17.14■□□□□ 0.33
CALD1-222ENST00000495522 ZBTB5O15062 677 aa17.14■□□□□ 0.33
CALD1-222ENST00000495522 MRPL12P52815 198 aaKnown RBP17.14■□□□□ 0.33
CALD1-222ENST00000495522 ATP2B2Q01814 1243 aa17.14■□□□□ 0.33
CALD1-222ENST00000495522 MCM6Q14566 821 aa17.14■□□□□ 0.33
CALD1-222ENST00000495522 UBE2SQ16763 222 aa17.14■□□□□ 0.33
CALD1-222ENST00000495522 KRT79Q5XKE5 535 aa17.14■□□□□ 0.33
CALD1-222ENST00000495522 UNC13DQ70J99 1090 aa17.14■□□□□ 0.33
CALD1-222ENST00000495522 KIAA0895Q8NCT3 520 aa17.14■□□□□ 0.33
CALD1-222ENST00000495522 MTMR8Q96EF0 704 aa17.14■□□□□ 0.33
CALD1-222ENST00000495522 MASTLQ96GX5 879 aa17.14■□□□□ 0.33
CALD1-222ENST00000495522 SLF1Q9BQI6 1058 aa17.14■□□□□ 0.33
CALD1-222ENST00000495522 NUP58Q9BVL2 599 aa17.14■□□□□ 0.33
CALD1-222ENST00000495522 EPN1Q9Y6I3 576 aaPredicted RBP17.14■□□□□ 0.33
CALD1-222ENST00000495522 MYH4Q9Y623 1939 aa17.14■□□□□ 0.33
CALD1-222ENST00000495522 CTAGE9A4FU28 777 aa17.13■□□□□ 0.33
CALD1-222ENST00000495522 NDUFA10O95299 355 aa17.13■□□□□ 0.33
CALD1-222ENST00000495522 CRKP46108 304 aa17.13■□□□□ 0.33
CALD1-222ENST00000495522 MTIF2P46199 727 aaKnown RBP17.13■□□□□ 0.33
CALD1-222ENST00000495522 DMTNQ08495 405 aa17.13■□□□□ 0.33
CALD1-222ENST00000495522 NFIAQ12857 509 aa17.13■□□□□ 0.33
CALD1-222ENST00000495522 TEX35Q5T0J7 233 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms