RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 WWC2Q6AWC2 1192 aa19.7■□□□□ 0.74
HDAC6-235ENST00000495515 GPKOWQ92917 476 aaPredicted RBP eCLIP19.7■□□□□ 0.74
HDAC6-235ENST00000495515 MPHOSPH6Q99547 160 aaKnown RBP19.7■□□□□ 0.74
HDAC6-235ENST00000495515 LLPHQ9BRT6 129 aaKnown RBP19.7■□□□□ 0.74
HDAC6-235ENST00000495515 MGAMO43451 1857 aa19.7■□□□□ 0.74
HDAC6-235ENST00000495515 STK36Q9NRP7 1315 aa19.7■□□□□ 0.74
HDAC6-235ENST00000495515 B4DLN1 442 aa19.69■□□□□ 0.74
HDAC6-235ENST00000495515 MRPL12P52815 198 aaKnown RBP19.69■□□□□ 0.74
HDAC6-235ENST00000495515 GHRHRQ02643 423 aa19.69■□□□□ 0.74
HDAC6-235ENST00000495515 MFSD14CQ5VZR4 134 aa19.69■□□□□ 0.74
HDAC6-235ENST00000495515 OLFML2BQ68BL8 750 aa19.69■□□□□ 0.74
HDAC6-235ENST00000495515 ZNF467Q7Z7K2 595 aaPredicted RBP19.69■□□□□ 0.74
HDAC6-235ENST00000495515 CCDC83Q8IWF9 413 aa19.69■□□□□ 0.74
HDAC6-235ENST00000495515 MSL3Q8N5Y2 521 aaKnown RBP19.69■□□□□ 0.74
HDAC6-235ENST00000495515 FAM133AQ8N9E0 248 aa19.69■□□□□ 0.74
HDAC6-235ENST00000495515 CCDC148Q8NFR7 591 aa19.69■□□□□ 0.74
HDAC6-235ENST00000495515 NPLOC4Q8TAT6 608 aa19.69■□□□□ 0.74
HDAC6-235ENST00000495515 MAML3Q96JK9 1138 aa19.69■□□□□ 0.74
HDAC6-235ENST00000495515 PSTPIP2Q9H939 334 aa19.69■□□□□ 0.74
HDAC6-235ENST00000495515 BIN2Q9UBW5 565 aaPredicted RBP19.69■□□□□ 0.74
HDAC6-235ENST00000495515 ZSWIM8A7E2V4 1837 aa19.69■□□□□ 0.74
HDAC6-235ENST00000495515 ZNF236Q9UL36 1845 aa19.69■□□□□ 0.74
HDAC6-235ENST00000495515 LOC102724159A0A0B4J2E5 919 aa19.68■□□□□ 0.74
HDAC6-235ENST00000495515 PPFIA3O75145 1194 aa19.68■□□□□ 0.74
HDAC6-235ENST00000495515 HMGCRP04035 888 aa19.68■□□□□ 0.74
HDAC6-235ENST00000495515 XBP1P17861 261 aa19.68■□□□□ 0.74
HDAC6-235ENST00000495515 HSD17B4P51659 736 aa19.68■□□□□ 0.74
HDAC6-235ENST00000495515 UBXN2AP68543 259 aa19.68■□□□□ 0.74
HDAC6-235ENST00000495515 PWP2Q15269 919 aaKnown RBP19.68■□□□□ 0.74
HDAC6-235ENST00000495515 PKN1Q16512 942 aa19.68■□□□□ 0.74
HDAC6-235ENST00000495515 SLC30A10Q6XR72 485 aa19.68■□□□□ 0.74
HDAC6-235ENST00000495515 FAM177A1Q8N128 213 aaPredicted RBP19.68■□□□□ 0.74
HDAC6-235ENST00000495515 TMX3Q96JJ7 454 aa19.68■□□□□ 0.74
HDAC6-235ENST00000495515 SH3GLB2Q9NR46 395 aa19.68■□□□□ 0.74
HDAC6-235ENST00000495515 ORC3Q9UBD5 711 aaPredicted RBP19.68■□□□□ 0.74
HDAC6-235ENST00000495515 BAZ2BQ9UIF8 2168 aaKnown RBP19.68■□□□□ 0.74
HDAC6-235ENST00000495515 ASB14A6NK59 587 aa19.67■□□□□ 0.74
HDAC6-235ENST00000495515 STXBP3O00186 592 aa19.67■□□□□ 0.74
HDAC6-235ENST00000495515 OPLAHO14841 1288 aa19.67■□□□□ 0.74
HDAC6-235ENST00000495515 ELNP15502 786 aa19.67■□□□□ 0.74
HDAC6-235ENST00000495515 CNTN2Q02246 1040 aa19.67■□□□□ 0.74
HDAC6-235ENST00000495515 NSUN7Q8NE18 718 aaKnown RBP19.67■□□□□ 0.74
HDAC6-235ENST00000495515 DNERQ8NFT8 737 aa19.67■□□□□ 0.74
HDAC6-235ENST00000495515 SMARCC2Q8TAQ2 1214 aa19.67■□□□□ 0.74
HDAC6-235ENST00000495515 SYTL5Q8TDW5 730 aaPredicted RBP19.67■□□□□ 0.74
HDAC6-235ENST00000495515 TRIB2Q92519 343 aa19.67■□□□□ 0.74
HDAC6-235ENST00000495515 ESYT2A0FGR8 921 aa19.66■□□□□ 0.74
HDAC6-235ENST00000495515 SMCO2A6NFE2 343 aa19.66■□□□□ 0.74
HDAC6-235ENST00000495515 PIK3CDO00329 1044 aa19.66■□□□□ 0.74
HDAC6-235ENST00000495515 CD2BP2O95400 341 aaKnown RBP19.66■□□□□ 0.74
HDAC6-235ENST00000495515 CTDNEP1O95476 244 aa19.66■□□□□ 0.74
HDAC6-235ENST00000495515 GNA11P29992 359 aa19.66■□□□□ 0.74
HDAC6-235ENST00000495515 ADCY7P51828 1080 aa19.66■□□□□ 0.74
HDAC6-235ENST00000495515 HMGN5P82970 282 aaKnown RBP19.66■□□□□ 0.74
HDAC6-235ENST00000495515 CCL14Q16627 93 aa19.66■□□□□ 0.74
HDAC6-235ENST00000495515 TBC1D5Q92609 795 aa19.66■□□□□ 0.74
HDAC6-235ENST00000495515 TINF2Q9BSI4 451 aa19.66■□□□□ 0.74
HDAC6-235ENST00000495515 C6orf50Q9HD87 102 aa19.66■□□□□ 0.74
HDAC6-235ENST00000495515 PLXNB2O15031 1838 aa19.66■□□□□ 0.74
HDAC6-235ENST00000495515 MAMDC4Q6UXC1 1216 aa19.65■□□□□ 0.74
HDAC6-235ENST00000495515 BICD2Q8TD16 824 aa19.65■□□□□ 0.74
HDAC6-235ENST00000495515 NSUN6Q8TEA1 469 aaKnown RBP19.65■□□□□ 0.74
HDAC6-235ENST00000495515 SH3TC2Q8TF17 1288 aa19.65■□□□□ 0.74
HDAC6-235ENST00000495515 SNX21Q969T3 373 aa19.65■□□□□ 0.74
HDAC6-235ENST00000495515 RIC8AQ9NPQ8 531 aa19.65■□□□□ 0.74
HDAC6-235ENST00000495515 SYNGAP1Q96PV0 1343 aa19.65■□□□□ 0.74
HDAC6-235ENST00000495515 SOWAHBA6NEL2 793 aa19.64■□□□□ 0.73
HDAC6-235ENST00000495515 INHAP05111 366 aa19.64■□□□□ 0.73
HDAC6-235ENST00000495515 HOXA13P31271 388 aaPredicted RBP19.64■□□□□ 0.73
HDAC6-235ENST00000495515 ALDH5A1P51649 535 aaPredicted RBP19.64■□□□□ 0.73
HDAC6-235ENST00000495515 NLRP5P59047 1200 aa19.64■□□□□ 0.73
HDAC6-235ENST00000495515 ST3GAL1Q11201 340 aa19.64■□□□□ 0.73
HDAC6-235ENST00000495515 ARHGEF16Q5VV41 709 aa19.64■□□□□ 0.73
HDAC6-235ENST00000495515 MCTP2Q6DN12 878 aa19.64■□□□□ 0.73
HDAC6-235ENST00000495515 TYW1BQ6NUM6 668 aa19.64■□□□□ 0.73
HDAC6-235ENST00000495515 ARMC5Q96C12 935 aa19.64■□□□□ 0.73
HDAC6-235ENST00000495515 RMDN3Q96TC7 470 aa19.64■□□□□ 0.73
HDAC6-235ENST00000495515 ZMYND12Q9H0C1 365 aa19.64■□□□□ 0.73
HDAC6-235ENST00000495515 FLRT1Q9NZU1 646 aa19.64■□□□□ 0.73
HDAC6-235ENST00000495515 VPS54Q9P1Q0 977 aa19.64■□□□□ 0.73
HDAC6-235ENST00000495515 NRBP1Q9UHY1 535 aa19.64■□□□□ 0.73
HDAC6-235ENST00000495515 CNPY2Q9Y2B0 182 aa19.64■□□□□ 0.73
HDAC6-235ENST00000495515 KIF3AQ9Y496 699 aa19.64■□□□□ 0.73
HDAC6-235ENST00000495515 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.64■□□□□ 0.73
HDAC6-235ENST00000495515 MYH6P13533 1939 aa19.63■□□□□ 0.73
HDAC6-235ENST00000495515 SPDYE3A6NKU9 549 aa19.63■□□□□ 0.73
HDAC6-235ENST00000495515 JAK2O60674 1132 aa19.63■□□□□ 0.73
HDAC6-235ENST00000495515 GALNT17Q6IS24 598 aa19.63■□□□□ 0.73
HDAC6-235ENST00000495515 USP17L6PQ6QN14 398 aa19.63■□□□□ 0.73
HDAC6-235ENST00000495515 FCHSD1Q86WN1 690 aa19.63■□□□□ 0.73
HDAC6-235ENST00000495515 HSCBQ8IWL3 235 aa19.63■□□□□ 0.73
HDAC6-235ENST00000495515 FAM184AQ8NB25 1140 aa19.63■□□□□ 0.73
HDAC6-235ENST00000495515 TAAR1Q96RJ0 339 aa19.63■□□□□ 0.73
HDAC6-235ENST00000495515 IWS1Q96ST2 819 aa19.63■□□□□ 0.73
HDAC6-235ENST00000495515 ALG1Q9BT22 464 aa19.63■□□□□ 0.73
HDAC6-235ENST00000495515 EHMT1Q9H9B1 1298 aa19.63■□□□□ 0.73
HDAC6-235ENST00000495515 DOCK3Q8IZD9 2030 aa19.63■□□□□ 0.73
HDAC6-235ENST00000495515 K7ELQ4 463 aaPredicted RBP19.62■□□□□ 0.73
HDAC6-235ENST00000495515 MEIS2O14770 477 aa19.62■□□□□ 0.73
HDAC6-235ENST00000495515 FOSP01100 380 aaPredicted RBP19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms