RNA–Protein interactions for RNA: ENST00000495484.5

PCDH15-223, Transcript of protocadherin related 15, human

TSL 5 BASIC

Gene PCDH15, Length 1,896 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH15-223	ENST00000495484	RABGAP1	Q9Y3P9	1069 aa		10.53	□□□□□ -0.72
PCDH15-223	ENST00000495484	CLIC4	Q9Y696	253 aa		10.53	□□□□□ -0.72
PCDH15-223	ENST00000495484	PHIP	Q8WWQ0	1821 aa		10.52	□□□□□ -0.72
PCDH15-223	ENST00000495484	BTBD19	C9JJ37	291 aa		10.52	□□□□□ -0.73
PCDH15-223	ENST00000495484	PDHX	O00330	501 aa		10.52	□□□□□ -0.73
PCDH15-223	ENST00000495484	OPLAH	O14841	1288 aa		10.52	□□□□□ -0.73
PCDH15-223	ENST00000495484	SLC25A27	O95847	323 aa		10.52	□□□□□ -0.73
PCDH15-223	ENST00000495484	SLC10A3	P09131	477 aa		10.52	□□□□□ -0.73
PCDH15-223	ENST00000495484	ATP2B1	P20020	1258 aa		10.52	□□□□□ -0.73
PCDH15-223	ENST00000495484	GCLC	P48506	637 aa	Predicted RBP	10.52	□□□□□ -0.73
PCDH15-223	ENST00000495484	HSD17B4	P51659	736 aa		10.52	□□□□□ -0.73
PCDH15-223	ENST00000495484	USP11	P51784	963 aa		10.52	□□□□□ -0.73
PCDH15-223	ENST00000495484	MKRN3	Q13064	507 aa	Known RBP	10.52	□□□□□ -0.73
PCDH15-223	ENST00000495484	PLS1	Q14651	629 aa		10.52	□□□□□ -0.73
PCDH15-223	ENST00000495484	UBE2S	Q16763	222 aa		10.52	□□□□□ -0.73
PCDH15-223	ENST00000495484	INF2	Q27J81	1249 aa		10.52	□□□□□ -0.73
PCDH15-223	ENST00000495484	EARS2	Q5JPH6	523 aa	Known RBP	10.52	□□□□□ -0.73
PCDH15-223	ENST00000495484	RIOX2	Q8IUF8	465 aa		10.52	□□□□□ -0.73
PCDH15-223	ENST00000495484	SMCR8	Q8TEV9	937 aa	Predicted RBP	10.52	□□□□□ -0.73
PCDH15-223	ENST00000495484	CLEC4D	Q8WXI8	215 aa		10.52	□□□□□ -0.73
PCDH15-223	ENST00000495484	GDPD2	Q9HCC8	539 aa		10.52	□□□□□ -0.73
PCDH15-223	ENST00000495484	OTOF	Q9HC10	1997 aa		10.52	□□□□□ -0.73
PCDH15-223	ENST00000495484	LAD1	O00515	517 aa		10.51	□□□□□ -0.73
PCDH15-223	ENST00000495484	MBD3	O95983	291 aa		10.51	□□□□□ -0.73
PCDH15-223	ENST00000495484	GCFC2	P16383	781 aa	Known RBP	10.51	□□□□□ -0.73
PCDH15-223	ENST00000495484	ME1	P48163	572 aa		10.51	□□□□□ -0.73
PCDH15-223	ENST00000495484	PPP4R3A	Q6IN85	833 aa		10.51	□□□□□ -0.73
PCDH15-223	ENST00000495484	PARK7	Q99497	189 aa	Known RBP	10.51	□□□□□ -0.73
PCDH15-223	ENST00000495484	ANO3	Q9BYT9	981 aa		10.51	□□□□□ -0.73
PCDH15-223	ENST00000495484	SPATC1L	Q9H0A9	340 aa		10.51	□□□□□ -0.73
PCDH15-223	ENST00000495484	ACAD9	Q9H845	621 aa		10.51	□□□□□ -0.73
PCDH15-223	ENST00000495484	RNF146	Q9NTX7	359 aa		10.51	□□□□□ -0.73
PCDH15-223	ENST00000495484	TMEM260	Q9NX78	707 aa		10.51	□□□□□ -0.73
PCDH15-223	ENST00000495484	PCDHB6	Q9Y5E3	794 aa		10.51	□□□□□ -0.73
PCDH15-223	ENST00000495484	FAM205C	A6NFA0	338 aa		10.51	□□□□□ -0.73
PCDH15-223	ENST00000495484	ADAMTS3	O15072	1205 aa		10.51	□□□□□ -0.73
PCDH15-223	ENST00000495484	CCNA1	P78396	465 aa		10.51	□□□□□ -0.73
PCDH15-223	ENST00000495484	SREBF2	Q12772	1141 aa		10.51	□□□□□ -0.73
PCDH15-223	ENST00000495484	PTPA	Q15257	358 aa		10.51	□□□□□ -0.73
PCDH15-223	ENST00000495484	LETM2	Q2VYF4	491 aa		10.51	□□□□□ -0.73
PCDH15-223	ENST00000495484	MOXD1	Q6UVY6	613 aa		10.51	□□□□□ -0.73
PCDH15-223	ENST00000495484	FTO	Q9C0B1	505 aa	Known RBP eCLIP	10.51	□□□□□ -0.73
PCDH15-223	ENST00000495484	HOMER2	Q9NSB8	354 aa		10.51	□□□□□ -0.73
PCDH15-223	ENST00000495484	MYH6	P13533	1939 aa		10.5	□□□□□ -0.73
PCDH15-223	ENST00000495484	NFIB	O00712	420 aa		10.5	□□□□□ -0.73
PCDH15-223	ENST00000495484	CCNT1	O60563	726 aa	Known RBP	10.5	□□□□□ -0.73
PCDH15-223	ENST00000495484	HOXA13	P31271	388 aa	Predicted RBP	10.5	□□□□□ -0.73
PCDH15-223	ENST00000495484	SREBF1	P36956	1147 aa		10.5	□□□□□ -0.73
PCDH15-223	ENST00000495484	ZNF174	Q15697	407 aa		10.5	□□□□□ -0.73
PCDH15-223	ENST00000495484	NOM1	Q5C9Z4	860 aa	Known RBP	10.5	□□□□□ -0.73
PCDH15-223	ENST00000495484	ARL6IP4	Q66PJ3	421 aa	Known RBP	10.5	□□□□□ -0.73
PCDH15-223	ENST00000495484	ADAL	Q6DHV7	355 aa		10.5	□□□□□ -0.73
PCDH15-223	ENST00000495484	RNF207	Q6ZRF8	634 aa		10.5	□□□□□ -0.73
PCDH15-223	ENST00000495484	KRI1	Q8N9T8	703 aa	Known RBP	10.5	□□□□□ -0.73
PCDH15-223	ENST00000495484	FERMT2	Q96AC1	680 aa		10.5	□□□□□ -0.73
PCDH15-223	ENST00000495484	PAGR1	Q9BTK6	254 aa		10.5	□□□□□ -0.73
PCDH15-223	ENST00000495484	BTBD7	Q9P203	1132 aa		10.5	□□□□□ -0.73
PCDH15-223	ENST00000495484	RBPJL	Q9UBG7	517 aa		10.5	□□□□□ -0.73
PCDH15-223	ENST00000495484	RIPK3	Q9Y572	518 aa		10.5	□□□□□ -0.73
PCDH15-223	ENST00000495484	DDX49	Q9Y6V7	483 aa	Known RBP	10.5	□□□□□ -0.73
PCDH15-223	ENST00000495484	CYP3A7-CYP3A51P	A0A087WV96	503 aa		10.49	□□□□□ -0.73
PCDH15-223	ENST00000495484		A0A1W2PQ27	194 aa		10.49	□□□□□ -0.73
PCDH15-223	ENST00000495484		A0A1W2PQ64	194 aa		10.49	□□□□□ -0.73
PCDH15-223	ENST00000495484		A0A1W2PQD8	194 aa		10.49	□□□□□ -0.73
PCDH15-223	ENST00000495484	TRAK2	O60296	914 aa		10.49	□□□□□ -0.73
PCDH15-223	ENST00000495484	CYP3A4	P08684	503 aa		10.49	□□□□□ -0.73
PCDH15-223	ENST00000495484	CYP3A7	P24462	503 aa		10.49	□□□□□ -0.73
PCDH15-223	ENST00000495484	MCM7	P33993	719 aa		10.49	□□□□□ -0.73
PCDH15-223	ENST00000495484	RPS6	P62753	249 aa	Known RBP	10.49	□□□□□ -0.73
PCDH15-223	ENST00000495484	ATP2C1	P98194	919 aa	Predicted RBP	10.49	□□□□□ -0.73
PCDH15-223	ENST00000495484	NBR1	Q14596	966 aa		10.49	□□□□□ -0.73
PCDH15-223	ENST00000495484	MUM1L1	Q5H9M0	696 aa		10.49	□□□□□ -0.73
PCDH15-223	ENST00000495484	NSMF	Q6X4W1	530 aa		10.49	□□□□□ -0.73
PCDH15-223	ENST00000495484	FCHSD1	Q86WN1	690 aa		10.49	□□□□□ -0.73
PCDH15-223	ENST00000495484	REM2	Q8IYK8	340 aa	Predicted RBP	10.49	□□□□□ -0.73
PCDH15-223	ENST00000495484	SHCBP1	Q8NEM2	672 aa		10.49	□□□□□ -0.73
PCDH15-223	ENST00000495484	GPRC5A	Q8NFJ5	357 aa		10.49	□□□□□ -0.73
PCDH15-223	ENST00000495484	ANP32E	Q9BTT0	268 aa		10.49	□□□□□ -0.73
PCDH15-223	ENST00000495484	MROH8	Q9H579	483 aa		10.49	□□□□□ -0.73
PCDH15-223	ENST00000495484	CREBZF	Q9NS37	354 aa		10.49	□□□□□ -0.73
PCDH15-223	ENST00000495484	PCDHA7	Q9UN72	937 aa		10.49	□□□□□ -0.73
PCDH15-223	ENST00000495484	SRPRB	Q9Y5M8	271 aa	Known RBP	10.49	□□□□□ -0.73
PCDH15-223	ENST00000495484	PFAS	O15067	1338 aa		10.49	□□□□□ -0.73
PCDH15-223	ENST00000495484	NEMF	O60524	1076 aa		10.49	□□□□□ -0.73
PCDH15-223	ENST00000495484	CUTA	O60888	179 aa		10.49	□□□□□ -0.73
PCDH15-223	ENST00000495484	CYP2C8	P10632	490 aa		10.49	□□□□□ -0.73
PCDH15-223	ENST00000495484	TAL1	P17542	331 aa	Predicted RBP	10.49	□□□□□ -0.73
PCDH15-223	ENST00000495484	PTPRE	P23469	700 aa		10.49	□□□□□ -0.73
PCDH15-223	ENST00000495484	PRPH	P41219	470 aa		10.49	□□□□□ -0.73
PCDH15-223	ENST00000495484	APLP1	P51693	650 aa		10.49	□□□□□ -0.73
PCDH15-223	ENST00000495484	ARHGAP4	P98171	946 aa		10.49	□□□□□ -0.73
PCDH15-223	ENST00000495484	PTGDR	Q13258	359 aa		10.49	□□□□□ -0.73
PCDH15-223	ENST00000495484	KLHL40	Q2TBA0	621 aa		10.49	□□□□□ -0.73
PCDH15-223	ENST00000495484	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	10.49	□□□□□ -0.73
PCDH15-223	ENST00000495484	NCAPG2	Q86XI2	1143 aa		10.49	□□□□□ -0.73
PCDH15-223	ENST00000495484	FAM43A	Q8N2R8	423 aa		10.49	□□□□□ -0.73
PCDH15-223	ENST00000495484	ZNF579	Q8NAF0	562 aa	Known RBP	10.49	□□□□□ -0.73
PCDH15-223	ENST00000495484	SYTL5	Q8TDW5	730 aa	Predicted RBP	10.49	□□□□□ -0.73
PCDH15-223	ENST00000495484	TBC1D5	Q92609	795 aa		10.49	□□□□□ -0.73
PCDH15-223	ENST00000495484	PGBD1	Q96JS3	809 aa		10.49	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms