RNA–Protein interactions for RNA: ENST00000494841.1

RPGR-210, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 1 (best)

Gene RPGR, Length 653 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-210ENST00000494841 VPS37DQ86XT2 251 aa9.14□□□□□ -0.95
RPGR-210ENST00000494841 WFDC8Q8IUA0 241 aa9.14□□□□□ -0.95
RPGR-210ENST00000494841 NIM1KQ8IY84 436 aa9.14□□□□□ -0.95
RPGR-210ENST00000494841 JDP2Q8WYK2 163 aa9.14□□□□□ -0.95
RPGR-210ENST00000494841 ADAM19Q9H013 955 aa9.14□□□□□ -0.95
RPGR-210ENST00000494841 EHD4Q9H223 541 aa9.14□□□□□ -0.95
RPGR-210ENST00000494841 VPS33BQ9H267 617 aa9.14□□□□□ -0.95
RPGR-210ENST00000494841 ZNF609O15014 1411 aa9.14□□□□□ -0.95
RPGR-210ENST00000494841 SCN9AQ15858 1988 aa9.13□□□□□ -0.95
RPGR-210ENST00000494841 KDM2BQ8NHM5 1336 aa9.13□□□□□ -0.95
RPGR-210ENST00000494841 METTL12A8MUP2 240 aa9.13□□□□□ -0.95
RPGR-210ENST00000494841 TAGLNQ01995 201 aaKnown RBP9.13□□□□□ -0.95
RPGR-210ENST00000494841 TSHZ3Q63HK5 1081 aa9.13□□□□□ -0.95
RPGR-210ENST00000494841 ZNF804AQ7Z570 1209 aa9.13□□□□□ -0.95
RPGR-210ENST00000494841 CHD1LQ86WJ1 897 aa9.13□□□□□ -0.95
RPGR-210ENST00000494841 IL22RA1Q8N6P7 574 aa9.13□□□□□ -0.95
RPGR-210ENST00000494841 GLIS3Q8NEA6 775 aa9.13□□□□□ -0.95
RPGR-210ENST00000494841 TDRD7Q8NHU6 1098 aaKnown RBP9.13□□□□□ -0.95
RPGR-210ENST00000494841 MXD3Q9BW11 206 aa9.13□□□□□ -0.95
RPGR-210ENST00000494841 PLVAPQ9BX97 442 aa9.13□□□□□ -0.95
RPGR-210ENST00000494841 COA1Q9GZY4 146 aa9.13□□□□□ -0.95
RPGR-210ENST00000494841 ZNRF3Q9ULT6 936 aa9.13□□□□□ -0.95
RPGR-210ENST00000494841 ARAP2Q8WZ64 1704 aa9.12□□□□□ -0.95
RPGR-210ENST00000494841 FZD9O00144 591 aa9.12□□□□□ -0.95
RPGR-210ENST00000494841 PIK3R2O00459 728 aa9.12□□□□□ -0.95
RPGR-210ENST00000494841 FRAT2O75474 233 aaPredicted RBP9.12□□□□□ -0.95
RPGR-210ENST00000494841 IL1R1P14778 569 aa9.12□□□□□ -0.95
RPGR-210ENST00000494841 CDC27P30260 824 aa9.12□□□□□ -0.95
RPGR-210ENST00000494841 GRIA4P48058 902 aa9.12□□□□□ -0.95
RPGR-210ENST00000494841 CXCL9Q07325 125 aa9.12□□□□□ -0.95
RPGR-210ENST00000494841 CHAF1AQ13111 956 aaPredicted RBP9.12□□□□□ -0.95
RPGR-210ENST00000494841 TTC39AQ5SRH9 613 aa9.12□□□□□ -0.95
RPGR-210ENST00000494841 TTLL5Q6EMB2 1281 aa9.12□□□□□ -0.95
RPGR-210ENST00000494841 CENPQQ7L2Z9 268 aaPredicted RBP9.12□□□□□ -0.95
RPGR-210ENST00000494841 CACTIN-AS1Q8N1I8 211 aa9.12□□□□□ -0.95
RPGR-210ENST00000494841 ABCB6Q9NP58 842 aa9.12□□□□□ -0.95
RPGR-210ENST00000494841 SH2B1Q9NRF2 756 aaPredicted RBP9.12□□□□□ -0.95
RPGR-210ENST00000494841 RNF19AQ9NV58 838 aa9.12□□□□□ -0.95
RPGR-210ENST00000494841 SOX13Q9UN79 622 aa9.12□□□□□ -0.95
RPGR-210ENST00000494841 ZNF541Q9H0D2 1346 aa9.11□□□□□ -0.95
RPGR-210ENST00000494841 PSMD14O00487 310 aa9.11□□□□□ -0.95
RPGR-210ENST00000494841 DDNO94850 711 aaPredicted RBP9.11□□□□□ -0.95
RPGR-210ENST00000494841 EPHA1P21709 976 aa9.11□□□□□ -0.95
RPGR-210ENST00000494841 RASGRF1Q13972 1273 aa9.11□□□□□ -0.95
RPGR-210ENST00000494841 CCDC158Q5M9N0 1113 aa9.11□□□□□ -0.95
RPGR-210ENST00000494841 DMRTC2Q8IXT2 367 aaPredicted RBP9.11□□□□□ -0.95
RPGR-210ENST00000494841 ASAP3Q8TDY4 903 aa9.11□□□□□ -0.95
RPGR-210ENST00000494841 DUSP9Q99956 384 aaKnown RBP9.11□□□□□ -0.95
RPGR-210ENST00000494841 GNL3LQ9NVN8 582 aaKnown RBP9.11□□□□□ -0.95
RPGR-210ENST00000494841 MYH13Q9UKX3 1938 aa9.11□□□□□ -0.95
RPGR-210ENST00000494841 TIAM2Q8IVF5 1701 aa9.11□□□□□ -0.95
RPGR-210ENST00000494841 AKAP11Q9UKA4 1901 aa9.1□□□□□ -0.95
RPGR-210ENST00000494841 COL8A1P27658 744 aa9.1□□□□□ -0.95
RPGR-210ENST00000494841 MCAMP43121 646 aa9.1□□□□□ -0.95
RPGR-210ENST00000494841 EIF6P56537 245 aaKnown RBP9.1□□□□□ -0.95
RPGR-210ENST00000494841 CIAPIN1Q6FI81 312 aa9.1□□□□□ -0.95
RPGR-210ENST00000494841 RGS22Q8NE09 1264 aa9.1□□□□□ -0.95
RPGR-210ENST00000494841 BSNDQ8WZ55 320 aa9.1□□□□□ -0.95
RPGR-210ENST00000494841 BCO2Q9BYV7 579 aa9.1□□□□□ -0.95
RPGR-210ENST00000494841 BOLA2Q9H3K6 86 aa9.1□□□□□ -0.95
RPGR-210ENST00000494841 NOP53Q9NZM5 478 aaKnown RBP9.1□□□□□ -0.95
RPGR-210ENST00000494841 HMG20BQ9P0W2 317 aa9.1□□□□□ -0.95
RPGR-210ENST00000494841 MYO5AQ9Y4I1 1855 aaKnown RBP9.1□□□□□ -0.95
RPGR-210ENST00000494841 COL1A1P02452 1464 aaPredicted RBP9.09□□□□□ -0.95
RPGR-210ENST00000494841 SALL3Q9BXA9 1300 aa9.09□□□□□ -0.95
RPGR-210ENST00000494841 SHTN1A0MZ66 631 aa9.09□□□□□ -0.95
RPGR-210ENST00000494841 MAP4K4O95819 1239 aaPredicted RBP9.09□□□□□ -0.95
RPGR-210ENST00000494841 VIL1P09327 827 aaKnown RBP9.09□□□□□ -0.95
RPGR-210ENST00000494841 UQCRFS1P1P0C7P4 283 aa9.09□□□□□ -0.95
RPGR-210ENST00000494841 ATP5JP18859 108 aa9.09□□□□□ -0.95
RPGR-210ENST00000494841 MX1P20591 662 aa9.09□□□□□ -0.95
RPGR-210ENST00000494841 FGD1P98174 961 aa9.09□□□□□ -0.95
RPGR-210ENST00000494841 TNIP1Q15025 636 aa9.09□□□□□ -0.95
RPGR-210ENST00000494841 SPRED3Q2MJR0 410 aa9.09□□□□□ -0.95
RPGR-210ENST00000494841 DACT2Q5SW24 774 aa9.09□□□□□ -0.95
RPGR-210ENST00000494841 STRIP1Q5VSL9 837 aa9.09□□□□□ -0.95
RPGR-210ENST00000494841 NXPE4Q6UWF7 544 aa9.09□□□□□ -0.95
RPGR-210ENST00000494841 VN1R5Q7Z5H4 357 aa9.09□□□□□ -0.95
RPGR-210ENST00000494841 CERS5Q8N5B7 392 aa9.09□□□□□ -0.95
RPGR-210ENST00000494841 SPATA5Q8NB90 893 aa9.09□□□□□ -0.95
RPGR-210ENST00000494841 ZNF526Q8TF50 670 aaPredicted RBP9.09□□□□□ -0.95
RPGR-210ENST00000494841 GIPC2Q8TF65 315 aa9.09□□□□□ -0.95
RPGR-210ENST00000494841 EDC3Q96F86 508 aaKnown RBP9.09□□□□□ -0.95
RPGR-210ENST00000494841 OSBPL7Q9BZF2 842 aa9.09□□□□□ -0.95
RPGR-210ENST00000494841 MUC3BQ9H195 1237 aa9.09□□□□□ -0.95
RPGR-210ENST00000494841 ECHDC1Q9NTX5 307 aa9.09□□□□□ -0.95
RPGR-210ENST00000494841 DENND2AQ9ULE3 1009 aa9.09□□□□□ -0.95
RPGR-210ENST00000494841 PPME1Q9Y570 386 aa9.09□□□□□ -0.95
RPGR-210ENST00000494841 FAM205AQ6ZU69 1335 aa9.08□□□□□ -0.96
RPGR-210ENST00000494841 ZNF646O15015 1829 aaPredicted RBP9.08□□□□□ -0.96
RPGR-210ENST00000494841 PSME4Q14997 1843 aa9.08□□□□□ -0.96
RPGR-210ENST00000494841 A0A096LPE4 126 aa9.08□□□□□ -0.96
RPGR-210ENST00000494841 A0A0A0MRY4 1105 aa9.08□□□□□ -0.96
RPGR-210ENST00000494841 A0A1W2PPZ6 126 aa9.08□□□□□ -0.96
RPGR-210ENST00000494841 F8W031 263 aaPredicted RBP9.08□□□□□ -0.96
RPGR-210ENST00000494841 FAM229AH3BQW9 127 aa9.08□□□□□ -0.96
RPGR-210ENST00000494841 RNF225M0QZC1 329 aaPredicted RBP9.08□□□□□ -0.96
RPGR-210ENST00000494841 ITPKAP23677 461 aa9.08□□□□□ -0.96
RPGR-210ENST00000494841 GNA15P30679 374 aa9.08□□□□□ -0.96
RPGR-210ENST00000494841 PDE1AP54750 535 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms