RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 PLA2G6O60733 806 aa20.92■□□□□ 0.94
TSPAN4-212ENST00000494815 SARSP49591 514 aaKnown RBP20.92■□□□□ 0.94
TSPAN4-212ENST00000494815 E2F4Q16254 413 aa20.92■□□□□ 0.94
TSPAN4-212ENST00000494815 ARHGAP27Q6ZUM4 889 aa20.92■□□□□ 0.94
TSPAN4-212ENST00000494815 FBXO11Q86XK2 927 aa20.92■□□□□ 0.94
TSPAN4-212ENST00000494815 GPC2Q8N158 579 aa20.92■□□□□ 0.94
TSPAN4-212ENST00000494815 SMARCE1Q969G3 411 aa20.92■□□□□ 0.94
TSPAN4-212ENST00000494815 MRFAP1L1Q96HT8 127 aa20.92■□□□□ 0.94
TSPAN4-212ENST00000494815 DEFB129Q9H1M3 183 aa20.92■□□□□ 0.94
TSPAN4-212ENST00000494815 UBE2SQ16763 222 aa20.91■□□□□ 0.94
TSPAN4-212ENST00000494815 TEX2Q8IWB9 1127 aa20.91■□□□□ 0.94
TSPAN4-212ENST00000494815 PRR12Q9ULL5 1215 aa20.91■□□□□ 0.94
TSPAN4-212ENST00000494815 SMC2O95347 1197 aa20.9■□□□□ 0.94
TSPAN4-212ENST00000494815 KIAA1755Q5JYT7 1200 aa20.9■□□□□ 0.94
TSPAN4-212ENST00000494815 PPP4R3AQ6IN85 833 aa20.9■□□□□ 0.94
TSPAN4-212ENST00000494815 LRRC8AQ8IWT6 810 aa20.9■□□□□ 0.94
TSPAN4-212ENST00000494815 NAP1L4Q99733 375 aaKnown RBP20.9■□□□□ 0.94
TSPAN4-212ENST00000494815 ASTN2O75129 1339 aaPredicted RBP20.9■□□□□ 0.94
TSPAN4-212ENST00000494815 CEP135Q66GS9 1140 aa20.9■□□□□ 0.94
TSPAN4-212ENST00000494815 APOBEC3FQ8IUX4 373 aaKnown RBP20.9■□□□□ 0.94
TSPAN4-212ENST00000494815 AOPEPQ8N6M6 819 aa20.9■□□□□ 0.94
TSPAN4-212ENST00000494815 CHURC1Q8WUH1 139 aa20.9■□□□□ 0.94
TSPAN4-212ENST00000494815 PAGE5Q96GU1 130 aa20.9■□□□□ 0.94
TSPAN4-212ENST00000494815 FHDC1Q9C0D6 1143 aaPredicted RBP20.9■□□□□ 0.94
TSPAN4-212ENST00000494815 CCSER1Q9C0I3 900 aa20.9■□□□□ 0.94
TSPAN4-212ENST00000494815 GPRC5DQ9NZD1 345 aa20.9■□□□□ 0.94
TSPAN4-212ENST00000494815 DICER1Q9UPY3 1922 aaKnown RBP20.9■□□□□ 0.94
TSPAN4-212ENST00000494815 PRR29P0C7W0 189 aa20.89■□□□□ 0.94
TSPAN4-212ENST00000494815 GCFC2P16383 781 aaKnown RBP20.89■□□□□ 0.94
TSPAN4-212ENST00000494815 AP3B2Q13367 1082 aa20.89■□□□□ 0.94
TSPAN4-212ENST00000494815 FAM83BQ5T0W9 1011 aa20.89■□□□□ 0.94
TSPAN4-212ENST00000494815 HOOK2Q96ED9 719 aa20.89■□□□□ 0.94
TSPAN4-212ENST00000494815 IKBKBO14920 756 aa20.89■□□□□ 0.93
TSPAN4-212ENST00000494815 CTNND1O60716 968 aaKnown RBP20.89■□□□□ 0.93
TSPAN4-212ENST00000494815 FAM160B2Q86V87 743 aa20.89■□□□□ 0.93
TSPAN4-212ENST00000494815 IPO4Q8TEX9 1081 aaKnown RBP20.89■□□□□ 0.93
TSPAN4-212ENST00000494815 MTMR9Q96QG7 549 aa20.89■□□□□ 0.93
TSPAN4-212ENST00000494815 MAN1B1Q9UKM7 699 aa20.89■□□□□ 0.93
TSPAN4-212ENST00000494815 SCAF8Q9UPN6 1271 aaKnown RBP20.89■□□□□ 0.93
TSPAN4-212ENST00000494815 UBA7P41226 1012 aa20.88■□□□□ 0.93
TSPAN4-212ENST00000494815 PDXDC2PQ6P474 469 aa20.88■□□□□ 0.93
TSPAN4-212ENST00000494815 GRAMD1CQ8IYS0 662 aa20.88■□□□□ 0.93
TSPAN4-212ENST00000494815 DISC1Q9NRI5 854 aa20.88■□□□□ 0.93
TSPAN4-212ENST00000494815 EDIL3O43854 480 aa20.87■□□□□ 0.93
TSPAN4-212ENST00000494815 MORC3Q14149 939 aa20.87■□□□□ 0.93
TSPAN4-212ENST00000494815 DCAF15Q66K64 600 aa20.87■□□□□ 0.93
TSPAN4-212ENST00000494815 POTEDQ86YR6 584 aa20.87■□□□□ 0.93
TSPAN4-212ENST00000494815 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.87■□□□□ 0.93
TSPAN4-212ENST00000494815 DDX41Q9UJV9 622 aaKnown RBP20.87■□□□□ 0.93
TSPAN4-212ENST00000494815 CALCRLQ16602 461 aa20.87■□□□□ 0.93
TSPAN4-212ENST00000494815 ISM2Q6H9L7 571 aa20.87■□□□□ 0.93
TSPAN4-212ENST00000494815 MLKLQ8NB16 471 aa20.87■□□□□ 0.93
TSPAN4-212ENST00000494815 GSDMAQ96QA5 445 aa20.87■□□□□ 0.93
TSPAN4-212ENST00000494815 DACH1Q9UI36 760 aa20.87■□□□□ 0.93
TSPAN4-212ENST00000494815 FEM1BQ9UK73 627 aa20.87■□□□□ 0.93
TSPAN4-212ENST00000494815 USP17L15C9J2P7 530 aa20.86■□□□□ 0.93
TSPAN4-212ENST00000494815 USP17L13C9JLJ4 530 aa20.86■□□□□ 0.93
TSPAN4-212ENST00000494815 USP17L11C9JVI0 530 aa20.86■□□□□ 0.93
TSPAN4-212ENST00000494815 USP17L18D6R9N7 530 aa20.86■□□□□ 0.93
TSPAN4-212ENST00000494815 USP17L22D6RA61 530 aa20.86■□□□□ 0.93
TSPAN4-212ENST00000494815 USP17L17D6RBQ6 530 aa20.86■□□□□ 0.93
TSPAN4-212ENST00000494815 USP17L19D6RCP7 530 aa20.86■□□□□ 0.93
TSPAN4-212ENST00000494815 USP17L20D6RJB6 530 aa20.86■□□□□ 0.93
TSPAN4-212ENST00000494815 MEIS2O14770 477 aa20.86■□□□□ 0.93
TSPAN4-212ENST00000494815 TDP2O95551 362 aa20.86■□□□□ 0.93
TSPAN4-212ENST00000494815 TPM4P67936 248 aa20.86■□□□□ 0.93
TSPAN4-212ENST00000494815 USP17L24Q0WX57 530 aa20.86■□□□□ 0.93
TSPAN4-212ENST00000494815 DPYDQ12882 1025 aa20.86■□□□□ 0.93
TSPAN4-212ENST00000494815 USP17L6PQ6QN14 398 aa20.86■□□□□ 0.93
TSPAN4-212ENST00000494815 IGSF22Q8N9C0 903 aa20.86■□□□□ 0.93
TSPAN4-212ENST00000494815 ATAD5Q96QE3 1844 aa20.86■□□□□ 0.93
TSPAN4-212ENST00000494815 FOSP01100 380 aaPredicted RBP20.86■□□□□ 0.93
TSPAN4-212ENST00000494815 BMP6P22004 513 aa20.86■□□□□ 0.93
TSPAN4-212ENST00000494815 STAT6P42226 847 aa20.86■□□□□ 0.93
TSPAN4-212ENST00000494815 AFMP43652 599 aa20.86■□□□□ 0.93
TSPAN4-212ENST00000494815 FXR2P51116 673 aaKnown RBP eCLIP20.86■□□□□ 0.93
TSPAN4-212ENST00000494815 USP11P51784 963 aa20.86■□□□□ 0.93
TSPAN4-212ENST00000494815 SNAP25P60880 206 aa20.86■□□□□ 0.93
TSPAN4-212ENST00000494815 USH1GQ495M9 461 aa20.86■□□□□ 0.93
TSPAN4-212ENST00000494815 NYAP1Q6ZVC0 841 aa20.86■□□□□ 0.93
TSPAN4-212ENST00000494815 LPAR1Q92633 364 aa20.86■□□□□ 0.93
TSPAN4-212ENST00000494815 ZNF341Q9BYN7 854 aa20.86■□□□□ 0.93
TSPAN4-212ENST00000494815 GLIS2Q9BZE0 524 aaPredicted RBP20.86■□□□□ 0.93
TSPAN4-212ENST00000494815 RANBP17Q9H2T7 1088 aaKnown RBP20.86■□□□□ 0.93
TSPAN4-212ENST00000494815 SLC37A4O43826 429 aa20.85■□□□□ 0.93
TSPAN4-212ENST00000494815 CDC25AP30304 524 aa20.85■□□□□ 0.93
TSPAN4-212ENST00000494815 GABPB1Q06547 395 aaPredicted RBP20.85■□□□□ 0.93
TSPAN4-212ENST00000494815 NAA30Q147X3 362 aaPredicted RBP20.85■□□□□ 0.93
TSPAN4-212ENST00000494815 KARSQ15046 597 aaKnown RBP20.85■□□□□ 0.93
TSPAN4-212ENST00000494815 NBPF12Q5TAG4 269 aaPredicted RBP20.85■□□□□ 0.93
TSPAN4-212ENST00000494815 ANGEL2Q5VTE6 544 aaKnown RBP20.85■□□□□ 0.93
TSPAN4-212ENST00000494815 TRPM4Q8TD43 1214 aa20.85■□□□□ 0.93
TSPAN4-212ENST00000494815 ANO3Q9BYT9 981 aa20.85■□□□□ 0.93
TSPAN4-212ENST00000494815 KIAA1683Q9H0B3 1180 aa20.85■□□□□ 0.93
TSPAN4-212ENST00000494815 CUEDC2Q9H467 287 aa20.85■□□□□ 0.93
TSPAN4-212ENST00000494815 NCAPHQ15003 741 aa20.85■□□□□ 0.93
TSPAN4-212ENST00000494815 ZYXQ15942 572 aaKnown RBP20.85■□□□□ 0.93
TSPAN4-212ENST00000494815 TMEM266Q2M3C6 531 aa20.85■□□□□ 0.93
TSPAN4-212ENST00000494815 CT47A1Q5JQC4 288 aaPredicted RBP20.85■□□□□ 0.93
TSPAN4-212ENST00000494815 MOXD1Q6UVY6 613 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms