RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.45□□□□□ -1.7
ATG3-207ENST00000494571 HELBQ8NG08 1087 aaPredicted RBP4.45□□□□□ -1.7
ATG3-207ENST00000494571 LINS1Q8NG48 757 aa4.45□□□□□ -1.7
ATG3-207ENST00000494571 DEPTORQ8TB45 409 aa4.45□□□□□ -1.7
ATG3-207ENST00000494571 ATP6V0A1Q93050 837 aa4.45□□□□□ -1.7
ATG3-207ENST00000494571 RNF25Q96BH1 459 aaPredicted RBP4.45□□□□□ -1.7
ATG3-207ENST00000494571 HAUS1Q96CS2 278 aa4.45□□□□□ -1.7
ATG3-207ENST00000494571 ERLEC1Q96DZ1 483 aa4.45□□□□□ -1.7
ATG3-207ENST00000494571 MAELQ96JY0 434 aaKnown RBP4.45□□□□□ -1.7
ATG3-207ENST00000494571 DNAJC1Q96KC8 554 aaKnown RBP4.45□□□□□ -1.7
ATG3-207ENST00000494571 AGBL1Q96MI9 1066 aa4.45□□□□□ -1.7
ATG3-207ENST00000494571 BPIFA3Q9BQP9 254 aa4.45□□□□□ -1.7
ATG3-207ENST00000494571 NDST4Q9H3R1 872 aa4.45□□□□□ -1.7
ATG3-207ENST00000494571 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.45□□□□□ -1.7
ATG3-207ENST00000494571 CFDP1Q9UEE9 299 aaPredicted RBP4.45□□□□□ -1.7
ATG3-207ENST00000494571 ADGRG1Q9Y653 693 aa4.45□□□□□ -1.7
ATG3-207ENST00000494571 SPHKAPQ2M3C7 1700 aa4.45□□□□□ -1.7
ATG3-207ENST00000494571 ABCA6Q8N139 1617 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 NPHP3-ACAD11A0A0J9YXS1 232 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 ESYT3A0FGR9 886 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 HTR3EA5X5Y0 456 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 TSPY2A6NKD2 308 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 TRIM37O94972 964 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 UBTFL6P0CB48 400 aaPredicted RBP4.44□□□□□ -1.7
ATG3-207ENST00000494571 ZCCHC18P0CG32 403 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 TSPY3P0CV98 308 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 TSPY8P0CW00 308 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 TROVE2P10155 538 aaKnown RBP eCLIP4.44□□□□□ -1.7
ATG3-207ENST00000494571 KCNA3P22001 575 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 HOXA10P31260 410 aaPredicted RBP4.44□□□□□ -1.7
ATG3-207ENST00000494571 IGHMBP2P38935 993 aaKnown RBP4.44□□□□□ -1.7
ATG3-207ENST00000494571 CCR3P51677 355 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 NDUFA8P51970 172 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 TSPY1Q01534 308 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 RNASELQ05823 741 aaKnown RBP4.44□□□□□ -1.7
ATG3-207ENST00000494571 PPARAQ07869 468 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 RCN2Q14257 317 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 NCAPHQ15003 741 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 KCTD19Q17RG1 926 aaPredicted RBP4.44□□□□□ -1.7
ATG3-207ENST00000494571 ALDH1L2Q3SY69 923 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 CCSAPQ6IQ19 270 aaPredicted RBP4.44□□□□□ -1.7
ATG3-207ENST00000494571 KDM7AQ6ZMT4 941 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 RUFY4Q6ZNE9 571 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 ZNF554Q86TJ5 538 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 ZC3H18Q86VM9 953 aaKnown RBP4.44□□□□□ -1.7
ATG3-207ENST00000494571 PPFIBP1Q86W92 1011 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 RAVER1Q8IY67 606 aaKnown RBP4.44□□□□□ -1.7
ATG3-207ENST00000494571 SLC7A5P1Q8MH63 180 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 SAMD3Q8N6K7 520 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 PPFIBP2Q8ND30 876 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 ERMNQ8TAM6 284 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 CCDC127Q96BQ5 260 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 KLHL29Q96CT2 875 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 DYDC2Q96IM9 177 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 MPHOSPH6Q99547 160 aaKnown RBP4.44□□□□□ -1.7
ATG3-207ENST00000494571 POLR3CQ9BUI4 534 aaPredicted RBP4.44□□□□□ -1.7
ATG3-207ENST00000494571 DDX23Q9BUQ8 820 aaKnown RBP4.44□□□□□ -1.7
ATG3-207ENST00000494571 IL1RAPL2Q9NP60 686 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 JADE2Q9NQC1 790 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 KIAA1468Q9P260 1216 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 SEL1LQ9UBV2 794 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 CASKIN1Q8WXD9 1431 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 CCT8L1PA6NM43 557 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 PDLIM1O00151 329 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 ATP9BO43861 1147 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 RAB11FIP3O75154 756 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 TACC1O75410 805 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 ATP1A1P05023 1023 aaKnown RBP4.44□□□□□ -1.7
ATG3-207ENST00000494571 VIMP08670 466 aaKnown RBP4.44□□□□□ -1.7
ATG3-207ENST00000494571 GSTT2P0CG29 244 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 GSTT2BP0CG30 244 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 HARSP12081 509 aaKnown RBP4.44□□□□□ -1.7
ATG3-207ENST00000494571 IL4RP24394 825 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 VARSP26640 1264 aaKnown RBP4.44□□□□□ -1.7
ATG3-207ENST00000494571 SERPINB3P29508 390 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 HALP42357 657 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 VPS41P49754 854 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 DNA2P51530 1060 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 NEK2P51955 445 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 CACNA2D1P54289 1103 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 KCTD21Q4G0X4 260 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 CFAP157Q5JU67 520 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 SPECC1LQ69YQ0 1117 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 SLC4A10Q6U841 1118 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 CYP26C1Q6V0L0 522 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 TRMT44Q8IYL2 757 aaKnown RBP4.44□□□□□ -1.7
ATG3-207ENST00000494571 CEP70Q8NHQ1 597 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 KLHDC4Q8TBB5 520 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 CCT6BQ92526 530 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 SH3GL1Q99961 368 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 TUT1Q9H6E5 874 aaKnown RBP4.44□□□□□ -1.7
ATG3-207ENST00000494571 RETREG1Q9H6L5 497 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 CCDC87Q9NVE4 849 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.44□□□□□ -1.7
ATG3-207ENST00000494571 SMARCAL1Q9NZC9 954 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 DMGDHQ9UI17 866 aaKnown RBP4.44□□□□□ -1.7
ATG3-207ENST00000494571 AGAP1Q9UPQ3 857 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 RBMX2Q9Y388 322 aaKnown RBP4.44□□□□□ -1.7
ATG3-207ENST00000494571 TIMM22Q9Y584 194 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 CD2APQ9Y5K6 639 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms