RNA–Protein interactions for RNA: ENST00000494243.5

TTC3-224, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-224ENST00000494243 DUSP28Q4G0W2 176 aa28.07■■■□□ 2.08
TTC3-224ENST00000494243 CWC27Q6UX04 472 aaKnown RBP28.07■■■□□ 2.08
TTC3-224ENST00000494243 SLC30A10Q6XR72 485 aa28.07■■■□□ 2.08
TTC3-224ENST00000494243 TMEM265A0A087WTH1 108 aa28.06■■■□□ 2.08
TTC3-224ENST00000494243 ZNF213O14771 459 aa28.06■■■□□ 2.08
TTC3-224ENST00000494243 RASIP1Q5U651 963 aa28.06■■■□□ 2.08
TTC3-224ENST00000494243 DGKHQ86XP1 1220 aa28.06■■■□□ 2.08
TTC3-224ENST00000494243 TMEM199Q8N511 208 aa28.06■■■□□ 2.08
TTC3-224ENST00000494243 MYLIPQ8WY64 445 aa28.06■■■□□ 2.08
TTC3-224ENST00000494243 PNMA2Q9UL42 364 aa28.06■■■□□ 2.08
TTC3-224ENST00000494243 RBM47A0AV96 593 aaKnown RBP28.05■■■□□ 2.08
TTC3-224ENST00000494243 ZEB2O60315 1214 aa28.05■■■□□ 2.08
TTC3-224ENST00000494243 CALML3P27482 149 aa28.05■■■□□ 2.08
TTC3-224ENST00000494243 CYP2C18P33260 490 aa28.05■■■□□ 2.08
TTC3-224ENST00000494243 PHF6Q8IWS0 365 aaKnown RBP eCLIP28.05■■■□□ 2.083e-6■■■■■ 28.8
TTC3-224ENST00000494243 WDR19Q8NEZ3 1342 aa28.05■■■□□ 2.08
TTC3-224ENST00000494243 GOLGA8HP0CJ92 632 aa28.04■■■□□ 2.08
TTC3-224ENST00000494243 ACRP10323 421 aa28.04■■■□□ 2.08
TTC3-224ENST00000494243 PSMC6P62333 389 aa28.04■■■□□ 2.08
TTC3-224ENST00000494243 RPS6P62753 249 aaKnown RBP28.04■■■□□ 2.08
TTC3-224ENST00000494243 RNF207Q6ZRF8 634 aa28.04■■■□□ 2.08
TTC3-224ENST00000494243 WDR11Q9BZH6 1224 aa28.04■■■□□ 2.08
TTC3-224ENST00000494243 TRPV6Q9H1D0 765 aa28.04■■■□□ 2.08
TTC3-224ENST00000494243 CPVLQ9H3G5 476 aa28.04■■■□□ 2.08
TTC3-224ENST00000494243 UMODL1Q5DID0 1318 aa28.03■■■□□ 2.08
TTC3-224ENST00000494243 KDM4AO75164 1064 aa28.03■■■□□ 2.08
TTC3-224ENST00000494243 DNAJB2P25686 324 aa28.03■■■□□ 2.08
TTC3-224ENST00000494243 GPATCH4Q5T3I0 446 aaKnown RBP28.03■■■□□ 2.08
TTC3-224ENST00000494243 ZNF365Q70YC5 407 aa28.03■■■□□ 2.08
TTC3-224ENST00000494243 MAFAQ8NHW3 353 aaPredicted RBP28.03■■■□□ 2.08
TTC3-224ENST00000494243 ANKS1AQ92625 1134 aa28.03■■■□□ 2.08
TTC3-224ENST00000494243 SEZ6LQ9BYH1 1024 aa28.03■■■□□ 2.08
TTC3-224ENST00000494243 UBA5Q9GZZ9 404 aa28.03■■■□□ 2.08
TTC3-224ENST00000494243 DIAPH3Q9NSV4 1193 aa28.03■■■□□ 2.08
TTC3-224ENST00000494243 LAMA4Q16363 1823 aa28.02■■■□□ 2.08
TTC3-224ENST00000494243 B4GALT4O60513 344 aa28.02■■■□□ 2.08
TTC3-224ENST00000494243 EDNRBP24530 442 aa28.02■■■□□ 2.08
TTC3-224ENST00000494243 HIPK3Q9H422 1215 aa28.02■■■□□ 2.08
TTC3-224ENST00000494243 NT5C2P49902 561 aa28.01■■■□□ 2.07
TTC3-224ENST00000494243 PNMA1Q8ND90 353 aa28.01■■■□□ 2.07
TTC3-224ENST00000494243 DSCC1Q9BVC3 393 aa28.01■■■□□ 2.07
TTC3-224ENST00000494243 IL23AQ9NPF7 189 aa28.01■■■□□ 2.07
TTC3-224ENST00000494243 GRXCR1A8MXD5 290 aa28■■■□□ 2.07
TTC3-224ENST00000494243 B4E1Z4 1266 aa28■■■□□ 2.07
TTC3-224ENST00000494243 HIP1O00291 1037 aa28■■■□□ 2.07
TTC3-224ENST00000494243 GRIN2CQ14957 1233 aa28■■■□□ 2.07
TTC3-224ENST00000494243 PSRC1Q6PGN9 363 aaPredicted RBP28■■■□□ 2.07
TTC3-224ENST00000494243 IQCA1Q86XH1 822 aa28■■■□□ 2.07
TTC3-224ENST00000494243 DNERQ8NFT8 737 aa28■■■□□ 2.07
TTC3-224ENST00000494243 NOC4LQ9BVI4 516 aaKnown RBP28■■■□□ 2.07
TTC3-224ENST00000494243 ZSWIM5Q9P217 1185 aa28■■■□□ 2.07
TTC3-224ENST00000494243 UNC80Q8N2C7 3258 aa28■■■□□ 2.07
TTC3-224ENST00000494243 PDE4DQ08499 809 aa27.99■■■□□ 2.07
TTC3-224ENST00000494243 USH1GQ495M9 461 aa27.99■■■□□ 2.07
TTC3-224ENST00000494243 CCDC178Q5BJE1 867 aa27.99■■■□□ 2.07
TTC3-224ENST00000494243 RGS22Q8NE09 1264 aa27.99■■■□□ 2.07
TTC3-224ENST00000494243 ZSCAN10Q96SZ4 725 aaPredicted RBP27.99■■■□□ 2.07
TTC3-224ENST00000494243 FOSL2P15408 326 aa27.98■■■□□ 2.07
TTC3-224ENST00000494243 PBX2P40425 430 aa27.98■■■□□ 2.07
TTC3-224ENST00000494243 PURAQ00577 322 aaKnown RBP27.98■■■□□ 2.07
TTC3-224ENST00000494243 ENAHQ8N8S7 591 aaPredicted RBP27.98■■■□□ 2.07
TTC3-224ENST00000494243 HERVK_113Q902F9 699 aa27.98■■■□□ 2.07
TTC3-224ENST00000494243 TBC1D5Q92609 795 aa27.98■■■□□ 2.07
TTC3-224ENST00000494243 TIFAQ96CG3 184 aa27.98■■■□□ 2.07
TTC3-224ENST00000494243 COL25A1Q9BXS0 654 aaPredicted RBP27.98■■■□□ 2.07
TTC3-224ENST00000494243 ALDH8A1Q9H2A2 487 aaPredicted RBP27.98■■■□□ 2.07
TTC3-224ENST00000494243 ZNF576Q9H609 170 aa27.98■■■□□ 2.07
TTC3-224ENST00000494243 KAT14Q9H8E8 782 aa27.98■■■□□ 2.07
TTC3-224ENST00000494243 POLR3EQ9NVU0 708 aa27.98■■■□□ 2.07
TTC3-224ENST00000494243 CDH23Q9H251 3354 aa27.97■■■□□ 2.07
TTC3-224ENST00000494243 CCL23P55773 120 aa27.97■■■□□ 2.07
TTC3-224ENST00000494243 PBX4Q9BYU1 374 aa27.97■■■□□ 2.07
TTC3-224ENST00000494243 WNT8AQ9H1J5 351 aa27.97■■■□□ 2.07
TTC3-224ENST00000494243 IL25Q9H293 177 aa27.97■■■□□ 2.07
TTC3-224ENST00000494243 CXXC1Q9P0U4 656 aaPredicted RBP27.97■■■□□ 2.07
TTC3-224ENST00000494243 CPT1AP50416 773 aa27.96■■■□□ 2.07
TTC3-224ENST00000494243 CDC37Q16543 378 aaPredicted RBP27.96■■■□□ 2.07
TTC3-224ENST00000494243 IMMTQ16891 758 aaKnown RBP27.96■■■□□ 2.07
TTC3-224ENST00000494243 ADGRF4Q8IZF3 695 aa27.96■■■□□ 2.07
TTC3-224ENST00000494243 OR6J1Q8NGC5 347 aa27.96■■■□□ 2.07
TTC3-224ENST00000494243 VWCEQ96DN2 955 aa27.96■■■□□ 2.07
TTC3-224ENST00000494243 EYSQ5T1H1 3165 aa27.95■■■□□ 2.07
TTC3-224ENST00000494243 FGBP02675 491 aa27.95■■■□□ 2.06
TTC3-224ENST00000494243 MYL3P08590 195 aa27.95■■■□□ 2.06
TTC3-224ENST00000494243 SCFD2Q8WU76 684 aa27.95■■■□□ 2.06
TTC3-224ENST00000494243 COPS5Q92905 334 aa27.95■■■□□ 2.06
TTC3-224ENST00000494243 MPHOSPH6Q99547 160 aaKnown RBP27.95■■■□□ 2.06
TTC3-224ENST00000494243 TRMT13Q9NUP7 481 aaKnown RBP27.95■■■□□ 2.06
TTC3-224ENST00000494243 CTNNA3Q9UI47 895 aa27.95■■■□□ 2.06
TTC3-224ENST00000494243 TNKSO95271 1327 aa27.94■■■□□ 2.06
TTC3-224ENST00000494243 CUL9Q8IWT3 2517 aa27.94■■■□□ 2.06
TTC3-224ENST00000494243 A6NJR5 290 aa27.94■■■□□ 2.06
TTC3-224ENST00000494243 NKRFO15226 690 aaKnown RBP eCLIP27.94■■■□□ 2.066e-8■■■□□ 18.1
TTC3-224ENST00000494243 PPP2R5BQ15173 497 aa27.94■■■□□ 2.06
TTC3-224ENST00000494243 ASPRV1Q53RT3 343 aa27.94■■■□□ 2.06
TTC3-224ENST00000494243 MTG1Q9BT17 334 aaPredicted RBP27.94■■■□□ 2.06
TTC3-224ENST00000494243 MAF1Q9H063 256 aa27.94■■■□□ 2.06
TTC3-224ENST00000494243 COL20A1Q9P218 1284 aa27.94■■■□□ 2.06
TTC3-224ENST00000494243 PDE4AP27815 886 aa27.93■■■□□ 2.06
TTC3-224ENST00000494243 KRT23Q9C075 422 aa27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms