RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 CMTR1Q8N1G2 835 aaKnown RBP17.09■□□□□ 0.33
ATG4B-224ENST00000494132 TMEM87BQ96K49 555 aa17.09■□□□□ 0.33
ATG4B-224ENST00000494132 AMNQ9BXJ7 453 aa17.09■□□□□ 0.33
ATG4B-224ENST00000494132 COL20A1Q9P218 1284 aa17.09■□□□□ 0.33
ATG4B-224ENST00000494132 DDAH1O94760 285 aa17.08■□□□□ 0.32
ATG4B-224ENST00000494132 PLEKHA8P1O95397 391 aa17.08■□□□□ 0.32
ATG4B-224ENST00000494132 C6orf222P0C671 652 aaPredicted RBP17.08■□□□□ 0.32
ATG4B-224ENST00000494132 CPA1P15085 419 aa17.08■□□□□ 0.32
ATG4B-224ENST00000494132 TNFAIP2Q03169 654 aa17.08■□□□□ 0.32
ATG4B-224ENST00000494132 RNF180Q86T96 592 aa17.08■□□□□ 0.32
ATG4B-224ENST00000494132 CTCFLQ8NI51 663 aaPredicted RBP17.08■□□□□ 0.32
ATG4B-224ENST00000494132 MTMR8Q96EF0 704 aa17.08■□□□□ 0.32
ATG4B-224ENST00000494132 TAAR1Q96RJ0 339 aa17.08■□□□□ 0.32
ATG4B-224ENST00000494132 RIOX1Q9H6W3 641 aa17.08■□□□□ 0.32
ATG4B-224ENST00000494132 ATP11BQ9Y2G3 1177 aa17.08■□□□□ 0.32
ATG4B-224ENST00000494132 LTBP2Q14767 1821 aa17.07■□□□□ 0.32
ATG4B-224ENST00000494132 OPLAHO14841 1288 aa17.07■□□□□ 0.32
ATG4B-224ENST00000494132 DUSP11O75319 330 aaKnown RBP17.07■□□□□ 0.32
ATG4B-224ENST00000494132 CFBP00751 764 aa17.07■□□□□ 0.32
ATG4B-224ENST00000494132 SMPD1P17405 629 aa17.07■□□□□ 0.32
ATG4B-224ENST00000494132 RTP1P59025 263 aa17.07■□□□□ 0.32
ATG4B-224ENST00000494132 BEX3Q00994 111 aa17.07■□□□□ 0.32
ATG4B-224ENST00000494132 ERICH6BQ5W0A0 696 aa17.07■□□□□ 0.32
ATG4B-224ENST00000494132 TAPT1Q6NXT6 567 aa17.07■□□□□ 0.32
ATG4B-224ENST00000494132 MICU3Q86XE3 530 aa17.07■□□□□ 0.32
ATG4B-224ENST00000494132 SYTL5Q8TDW5 730 aaPredicted RBP17.07■□□□□ 0.32
ATG4B-224ENST00000494132 MRPL11Q9Y3B7 192 aaKnown RBP17.07■□□□□ 0.32
ATG4B-224ENST00000494132 PCDHA1Q9Y5I3 950 aa17.07■□□□□ 0.32
ATG4B-224ENST00000494132 DOCK5Q9H7D0 1870 aa17.06■□□□□ 0.32
ATG4B-224ENST00000494132 A0A1W2PQ45 241 aaPredicted RBP17.06■□□□□ 0.32
ATG4B-224ENST00000494132 A0A1W2PQY0 241 aa17.06■□□□□ 0.32
ATG4B-224ENST00000494132 PDE4DQ08499 809 aa17.06■□□□□ 0.32
ATG4B-224ENST00000494132 TRIM60Q495X7 471 aa17.06■□□□□ 0.32
ATG4B-224ENST00000494132 SLC39A5Q6ZMH5 540 aa17.06■□□□□ 0.32
ATG4B-224ENST00000494132 MORC4Q8TE76 937 aa17.06■□□□□ 0.32
ATG4B-224ENST00000494132 MTA3Q9BTC8 594 aa17.06■□□□□ 0.32
ATG4B-224ENST00000494132 PHF24Q9UPV7 400 aa17.06■□□□□ 0.32
ATG4B-224ENST00000494132 SNX14Q9Y5W7 946 aa17.06■□□□□ 0.32
ATG4B-224ENST00000494132 SLC12A7Q9Y666 1083 aa17.06■□□□□ 0.32
ATG4B-224ENST00000494132 hCG_1642624A0A1W2PR95 340 aa17.05■□□□□ 0.32
ATG4B-224ENST00000494132 HOXA13P31271 388 aaPredicted RBP17.05■□□□□ 0.32
ATG4B-224ENST00000494132 HSPA4P34932 840 aa17.05■□□□□ 0.32
ATG4B-224ENST00000494132 LIFRP42702 1097 aa17.05■□□□□ 0.32
ATG4B-224ENST00000494132 EXOSC10Q01780 885 aaKnown RBP17.05■□□□□ 0.32
ATG4B-224ENST00000494132 KCNA10Q16322 511 aa17.05■□□□□ 0.32
ATG4B-224ENST00000494132 DHX32Q7L7V1 743 aaKnown RBP17.05■□□□□ 0.32
ATG4B-224ENST00000494132 TLK2Q86UE8 772 aa17.05■□□□□ 0.32
ATG4B-224ENST00000494132 TMTC2Q8N394 836 aa17.05■□□□□ 0.32
ATG4B-224ENST00000494132 CCDC82Q8N4S0 544 aa17.05■□□□□ 0.32
ATG4B-224ENST00000494132 KLHDC9Q8NEP7 349 aa17.05■□□□□ 0.32
ATG4B-224ENST00000494132 JAKMIP1Q96N16 626 aaKnown RBP17.05■□□□□ 0.32
ATG4B-224ENST00000494132 VTA1Q9NP79 307 aa17.05■□□□□ 0.32
ATG4B-224ENST00000494132 GNEQ9Y223 722 aaKnown RBP17.05■□□□□ 0.32
ATG4B-224ENST00000494132 DNAH12Q6ZR08 3092 aa17.04■□□□□ 0.32
ATG4B-224ENST00000494132 PNMA6FA0A0J9YX94 578 aa17.04■□□□□ 0.32
ATG4B-224ENST00000494132 CTAGE5O15320 804 aa17.04■□□□□ 0.32
ATG4B-224ENST00000494132 DYNC1LI2O43237 492 aaPredicted RBP17.04■□□□□ 0.32
ATG4B-224ENST00000494132 EIF2AK2P19525 551 aaKnown RBP17.04■□□□□ 0.32
ATG4B-224ENST00000494132 KIF5BP33176 963 aa17.04■□□□□ 0.32
ATG4B-224ENST00000494132 ACLYP53396 1101 aa17.04■□□□□ 0.32
ATG4B-224ENST00000494132 GJA9P57773 515 aa17.04■□□□□ 0.32
ATG4B-224ENST00000494132 TSGA10IPQ3SY00 556 aa17.04■□□□□ 0.32
ATG4B-224ENST00000494132 GNASQ5JWF2 1037 aa17.04■□□□□ 0.32
ATG4B-224ENST00000494132 MCF2L2Q86YR7 1114 aa17.04■□□□□ 0.32
ATG4B-224ENST00000494132 SRBD1Q8N5C6 995 aaKnown RBP17.04■□□□□ 0.32
ATG4B-224ENST00000494132 RGS22Q8NE09 1264 aa17.04■□□□□ 0.32
ATG4B-224ENST00000494132 DNERQ8NFT8 737 aa17.04■□□□□ 0.32
ATG4B-224ENST00000494132 RMDN3Q96TC7 470 aa17.04■□□□□ 0.32
ATG4B-224ENST00000494132 UPF3AQ9H1J1 476 aaKnown RBP17.04■□□□□ 0.32
ATG4B-224ENST00000494132 SPC25Q9HBM1 224 aa17.04■□□□□ 0.32
ATG4B-224ENST00000494132 RBM27Q9P2N5 1060 aaKnown RBP17.04■□□□□ 0.32
ATG4B-224ENST00000494132 BRPF3Q9ULD4 1205 aa17.04■□□□□ 0.32
ATG4B-224ENST00000494132 REC8O95072 547 aa17.03■□□□□ 0.32
ATG4B-224ENST00000494132 ASGR1P07306 291 aa17.03■□□□□ 0.32
ATG4B-224ENST00000494132 EDNRBP24530 442 aa17.03■□□□□ 0.32
ATG4B-224ENST00000494132 KRT32Q14532 448 aa17.03■□□□□ 0.32
ATG4B-224ENST00000494132 HABP4Q5JVS0 413 aaKnown RBP17.03■□□□□ 0.32
ATG4B-224ENST00000494132 CCSAPQ6IQ19 270 aaPredicted RBP17.03■□□□□ 0.32
ATG4B-224ENST00000494132 SGMS1Q86VZ5 419 aa17.03■□□□□ 0.32
ATG4B-224ENST00000494132 COPS5Q92905 334 aa17.03■□□□□ 0.32
ATG4B-224ENST00000494132 ZFP91Q96JP5 570 aaPredicted RBP17.03■□□□□ 0.32
ATG4B-224ENST00000494132 MAP3K14Q99558 947 aa17.03■□□□□ 0.32
ATG4B-224ENST00000494132 SPZ1Q9BXG8 430 aa17.03■□□□□ 0.32
ATG4B-224ENST00000494132 WDR11Q9BZH6 1224 aa17.03■□□□□ 0.32
ATG4B-224ENST00000494132 PRDM5Q9NQX1 630 aaPredicted RBP17.03■□□□□ 0.32
ATG4B-224ENST00000494132 STARD7Q9NQZ5 370 aa17.03■□□□□ 0.32
ATG4B-224ENST00000494132 NAP1L2Q9ULW6 460 aaPredicted RBP17.03■□□□□ 0.32
ATG4B-224ENST00000494132 CST5P28325 142 aaPredicted RBP17.02■□□□□ 0.32
ATG4B-224ENST00000494132 MDM2Q00987 491 aaPredicted RBP17.02■□□□□ 0.32
ATG4B-224ENST00000494132 ARHGEF16Q5VV41 709 aa17.02■□□□□ 0.32
ATG4B-224ENST00000494132 IQSEC1Q6DN90 963 aa17.02■□□□□ 0.32
ATG4B-224ENST00000494132 APOA5Q6Q788 366 aa17.02■□□□□ 0.32
ATG4B-224ENST00000494132 FCHSD1Q86WN1 690 aa17.02■□□□□ 0.32
ATG4B-224ENST00000494132 KCNB2Q92953 911 aa17.02■□□□□ 0.32
ATG4B-224ENST00000494132 VTI1AQ96AJ9 217 aa17.02■□□□□ 0.32
ATG4B-224ENST00000494132 RRP36Q96EU6 259 aaKnown RBP17.02■□□□□ 0.32
ATG4B-224ENST00000494132 MPHOSPH6Q99547 160 aaKnown RBP17.02■□□□□ 0.32
ATG4B-224ENST00000494132 TSEN34Q9BSV6 310 aaKnown RBP17.02■□□□□ 0.32
ATG4B-224ENST00000494132 AP5M1Q9H0R1 490 aa17.02■□□□□ 0.32
ATG4B-224ENST00000494132 KLF18A0A0U1RQI7 1052 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms